Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622256
Identifier: 116622256
GI number: 116622256
Start: 3993348
End: 3994136
Strand: Direct
Name: 116622256
Synonym: Acid_3149
Alternate gene names: NA
Gene position: 3993348-3994136 (Clockwise)
Preceding gene: 116622255
Following gene: 116622257
Centisome position: 40.07
GC content: 61.6
Gene sequence:
>789_bases TTGCCGGATACGTTGATGGATCACGGATACATCGAGGAGCACCAGATCGTTTCGCTGTATGCGATGGGGAAACTCTCGCC CGCCGATCGCTTCGGGTTTGAGGACCACCTCGTGGAGTGCAGGCAGTGCCAGGATGAACTGGAGCTGACGGAGGATTTTC GCCGCGGCCTGCAAGACGTGGTTTCTCAAGACGAAATCCGCAGCGGCGCTTCGCGCACCGCGGCAGGCTGGCTCTCCGGT TTTCGCGCCTGGCGGCCGGTTGCCGCGTTTGCATTCGCCTTGCTTGCTGTTGCCGGCTTCCTGTTCATCACTCTCAACCG GGGACTCCGCCTCGAATTGGAGAGAACGCGCGCCGCTGCGTCAGACTGGGAACGTCGTTACAGCGGAGAGCAGCAGGCGC GACTGCTCGCGGAGTCGCAGCTGCGAGACGCGCCGGCACAAGGCGCCGCTCCGCTGTTCACGCTCAACCTCACGCGGGGC GCCGGCTTGGCGGCCGCTGAACCGCCGAACACCGTCTCGATTTCTCCTTCTGCGAAATCGCTTGTGCTTTCCCTGGAATG GCAGAACGACCCGGACTTTCAGAGCTACCGGGCGATGTTGGTCGATGCCACGGGGCATTCGGTATGGTCGGCCGGTGATA TCCCGGCTCCTTCTTCGGGCGCTCTCGCCATCACCTTATCTGCGAACCTCCTCCATCCCGGTAAATATCTGCTTACCGTC GAAGGAATGAGGGCCGGCAGTTACTCGGCCATAGGCCACTACAGCTTTCGAGTCACACCTTCCAAATAG
Upstream 100 bases:
>100_bases CCGGGAGCGCTATCGGGAACTCTATGAAAAACTGGTCCAACGCCAGTCGACCGGCTTGGGATAATTCCCGGGACTGGCAC ACTTTAGGGATGGACCGTTA
Downstream 100 bases:
>100_bases AGCGAGTGATAAAGGGCGGAATTCTTACGCGCCGCACGGCCACTTCGATGCTCTTCGCGTCGGTACCGAAGCGGGCGTGC CGGTAGACAGAACGCCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MPDTLMDHGYIEEHQIVSLYAMGKLSPADRFGFEDHLVECRQCQDELELTEDFRRGLQDVVSQDEIRSGASRTAAGWLSG FRAWRPVAAFAFALLAVAGFLFITLNRGLRLELERTRAAASDWERRYSGEQQARLLAESQLRDAPAQGAAPLFTLNLTRG AGLAAAEPPNTVSISPSAKSLVLSLEWQNDPDFQSYRAMLVDATGHSVWSAGDIPAPSSGALAITLSANLLHPGKYLLTV EGMRAGSYSAIGHYSFRVTPSK
Sequences:
>Translated_262_residues MPDTLMDHGYIEEHQIVSLYAMGKLSPADRFGFEDHLVECRQCQDELELTEDFRRGLQDVVSQDEIRSGASRTAAGWLSG FRAWRPVAAFAFALLAVAGFLFITLNRGLRLELERTRAAASDWERRYSGEQQARLLAESQLRDAPAQGAAPLFTLNLTRG AGLAAAEPPNTVSISPSAKSLVLSLEWQNDPDFQSYRAMLVDATGHSVWSAGDIPAPSSGALAITLSANLLHPGKYLLTV EGMRAGSYSAIGHYSFRVTPSK >Mature_261_residues PDTLMDHGYIEEHQIVSLYAMGKLSPADRFGFEDHLVECRQCQDELELTEDFRRGLQDVVSQDEIRSGASRTAAGWLSGF RAWRPVAAFAFALLAVAGFLFITLNRGLRLELERTRAAASDWERRYSGEQQARLLAESQLRDAPAQGAAPLFTLNLTRGA GLAAAEPPNTVSISPSAKSLVLSLEWQNDPDFQSYRAMLVDATGHSVWSAGDIPAPSSGALAITLSANLLHPGKYLLTVE GMRAGSYSAIGHYSFRVTPSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28599; Mature: 28468
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTLMDHGYIEEHQIVSLYAMGKLSPADRFGFEDHLVECRQCQDELELTEDFRRGLQDV CCCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VSQDEIRSGASRTAAGWLSGFRAWRPVAAFAFALLAVAGFLFITLNRGLRLELERTRAAA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH SDWERRYSGEQQARLLAESQLRDAPAQGAAPLFTLNLTRGAGLAAAEPPNTVSISPSAKS HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCE LVLSLEWQNDPDFQSYRAMLVDATGHSVWSAGDIPAPSSGALAITLSANLLHPGKYLLTV EEEEEEECCCCCHHHEEEEEEECCCCCEECCCCCCCCCCCCEEEEEECCEECCCEEEEEE EGMRAGSYSAIGHYSFRVTPSK ECCCCCCCCEEEEEEEEEECCC >Mature Secondary Structure PDTLMDHGYIEEHQIVSLYAMGKLSPADRFGFEDHLVECRQCQDELELTEDFRRGLQDV CCCCCCCCCCCCCCEEEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VSQDEIRSGASRTAAGWLSGFRAWRPVAAFAFALLAVAGFLFITLNRGLRLELERTRAAA HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHH SDWERRYSGEQQARLLAESQLRDAPAQGAAPLFTLNLTRGAGLAAAEPPNTVSISPSAKS HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCE LVLSLEWQNDPDFQSYRAMLVDATGHSVWSAGDIPAPSSGALAITLSANLLHPGKYLLTV EEEEEEECCCCCHHHEEEEEEECCCCCEECCCCCCCCCCCCEEEEEECCEECCCEEEEEE EGMRAGSYSAIGHYSFRVTPSK ECCCCCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA