Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622227
Identifier: 116622227
GI number: 116622227
Start: 3955224
End: 3956774
Strand: Direct
Name: 116622227
Synonym: Acid_3120
Alternate gene names: NA
Gene position: 3955224-3956774 (Clockwise)
Preceding gene: 116622226
Following gene: 116622236
Centisome position: 39.69
GC content: 64.99
Gene sequence:
>1551_bases ATGACGAGAACGCTTGTGATTCTGCTCATGCTCGCCGCCACGCGAGGCGGTGCCCAGCCCATCGTGCTCGCGCCGCGGAC GATGCCGCGAACCGGCGCCGTTGACCCGCGGTTCCAGTCCTACAACATCGAGATGGTCGAGGTCACCGGCGGACGCTTTT GGAAGCCGTACGCCAGCGCGGCCCCGGCGTCCGCCCCCAAGCCGGACGCCGCGCCCGCCGGGCTTCCGGCCGACCTTTTG GAGTACCGCCCGCCCATCGATCTTGCCAATGCCCGATTACGCAAACTGGCCGCGACTCTCGGGCCAACTTATATCCGGGT CAGTGGAACCTGGGCAAACACCATCTACTTTCATGACTCCGACGATGCCGCTCCCGAGAAGCCACCCGCCGGTTTCAACG CCATCCTGACGAGGAAGCAATGGAAAGGCGTGATCGATTTTGTCCAGGCCGCAGAAGGCCGTCTCGTGACTTCGTTCGCC TTTGGGGCAGGGAATCGCGATACCGCTGGAGCCTGGACTCCGGATCAGGCGCGGCACGTCATCGCCTATACGAAAGCGGC CGGCGGCAGCATCGCCGCGGCCGAGTTCATGAACGAACCCAACTATGCGGCGCAGGGCGGCGCGATCCGGGGTTACGACG CCGCCGCATACGGCCGGGATATTGAGACCTTCCGCCGCTTTTTCCGCGAGGCTGCGCCGGGAAGTCTGTTCCTCGGCCCC GGTTCCACGGGCGAAGGCGGCGTGCTCGGCAAGATTCCCACACCCGGCAAATTGCAAACCGAGGATCTCTTGAAAGCCAC GGGCCCGGTCTTCGACGTGTTTTCCTATCACATCTACGCAGCCGTCTCGCAGCGCTGCTCCGGGCCGATGCCCTCGATCG GCACCACCGCGGCGGCCGCGCGTTCGAGCGAGTGGCTCTCCCGTCCGGACAAGATTCACGCCTTCTATGCCGACTTGCGC GACCGCTACTTGCCGGGCAAGCCGCTCTGGGTCACGGAAGTCGCCGATGCCGGATGCGGAGGCAATCCCTGGGCCTCCAC CTTTCTCGACACCTTCCGCTACCTCAACCAGCACGGCCGGCTTGCGCAACAGGGTGTCCAGATGATCGCGCACAATACGC TCTCCGCCAGCGATTATGGCCTGCTCGATGAGAAGACGTACGACCCGCGTCCCAACTATTGGGGCGCGGTTTTGTGGCAC CGCCTCATGGGGACGACCGTCCTCAATCCCGTAACCAAGGCCGCGGACGACCTGTACCTCTATGCCCATTGCCAGGCAGG CCATCCCAGCGGCGTGACGGTGCTCGCGATCAACGCCGGGACAACCGCTCGCGAACTTGACGCGCCAATGGGGGCCGAGC GCTACACACTCTCCGCCGCACAGCCTGATAGCCCGACCGTACAACTCAACGGCCGCACCCTCGAAGCCTCTGCCGATGGT GGATTGCCGCCGCTCACCGGAGCGCCCGTTCGCGCAGGACGCACGTCGCTCCCGGCAGCCAGCATCACCTTCCTGGTCTT TCCCGACGCTGCAAACCAATCTTGCCGGTAA
Upstream 100 bases:
>100_bases TGGGACCCTCGATTCGCCGGAAAAAATCAGCGGGAAAGTGCTCGCCGTCGAGTTCTCGATCGAAGGCGAGTTCACCGCCA CCCGCGCGAAGTAGGGTCGT
Downstream 100 bases:
>100_bases TCTGCCGCCTAAGATCTTGTGACGCGGCCGCCTGGTGCAACGAGAGCCGGCAACATCGTCACGCAGATTGCCAAACCGCA ATGTGCATCGCCATCAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MTRTLVILLMLAATRGGAQPIVLAPRTMPRTGAVDPRFQSYNIEMVEVTGGRFWKPYASAAPASAPKPDAAPAGLPADLL EYRPPIDLANARLRKLAATLGPTYIRVSGTWANTIYFHDSDDAAPEKPPAGFNAILTRKQWKGVIDFVQAAEGRLVTSFA FGAGNRDTAGAWTPDQARHVIAYTKAAGGSIAAAEFMNEPNYAAQGGAIRGYDAAAYGRDIETFRRFFREAAPGSLFLGP GSTGEGGVLGKIPTPGKLQTEDLLKATGPVFDVFSYHIYAAVSQRCSGPMPSIGTTAAAARSSEWLSRPDKIHAFYADLR DRYLPGKPLWVTEVADAGCGGNPWASTFLDTFRYLNQHGRLAQQGVQMIAHNTLSASDYGLLDEKTYDPRPNYWGAVLWH RLMGTTVLNPVTKAADDLYLYAHCQAGHPSGVTVLAINAGTTARELDAPMGAERYTLSAAQPDSPTVQLNGRTLEASADG GLPPLTGAPVRAGRTSLPAASITFLVFPDAANQSCR
Sequences:
>Translated_516_residues MTRTLVILLMLAATRGGAQPIVLAPRTMPRTGAVDPRFQSYNIEMVEVTGGRFWKPYASAAPASAPKPDAAPAGLPADLL EYRPPIDLANARLRKLAATLGPTYIRVSGTWANTIYFHDSDDAAPEKPPAGFNAILTRKQWKGVIDFVQAAEGRLVTSFA FGAGNRDTAGAWTPDQARHVIAYTKAAGGSIAAAEFMNEPNYAAQGGAIRGYDAAAYGRDIETFRRFFREAAPGSLFLGP GSTGEGGVLGKIPTPGKLQTEDLLKATGPVFDVFSYHIYAAVSQRCSGPMPSIGTTAAAARSSEWLSRPDKIHAFYADLR DRYLPGKPLWVTEVADAGCGGNPWASTFLDTFRYLNQHGRLAQQGVQMIAHNTLSASDYGLLDEKTYDPRPNYWGAVLWH RLMGTTVLNPVTKAADDLYLYAHCQAGHPSGVTVLAINAGTTARELDAPMGAERYTLSAAQPDSPTVQLNGRTLEASADG GLPPLTGAPVRAGRTSLPAASITFLVFPDAANQSCR >Mature_515_residues TRTLVILLMLAATRGGAQPIVLAPRTMPRTGAVDPRFQSYNIEMVEVTGGRFWKPYASAAPASAPKPDAAPAGLPADLLE YRPPIDLANARLRKLAATLGPTYIRVSGTWANTIYFHDSDDAAPEKPPAGFNAILTRKQWKGVIDFVQAAEGRLVTSFAF GAGNRDTAGAWTPDQARHVIAYTKAAGGSIAAAEFMNEPNYAAQGGAIRGYDAAAYGRDIETFRRFFREAAPGSLFLGPG STGEGGVLGKIPTPGKLQTEDLLKATGPVFDVFSYHIYAAVSQRCSGPMPSIGTTAAAARSSEWLSRPDKIHAFYADLRD RYLPGKPLWVTEVADAGCGGNPWASTFLDTFRYLNQHGRLAQQGVQMIAHNTLSASDYGLLDEKTYDPRPNYWGAVLWHR LMGTTVLNPVTKAADDLYLYAHCQAGHPSGVTVLAINAGTTARELDAPMGAERYTLSAAQPDSPTVQLNGRTLEASADGG LPPLTGAPVRAGRTSLPAASITFLVFPDAANQSCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI94721347, Length=500, Percent_Identity=25.6, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI148746204, Length=500, Percent_Identity=25.6, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI261878501, Length=416, Percent_Identity=26.6826923076923, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI261878503, Length=470, Percent_Identity=24.468085106383, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI261878505, Length=221, Percent_Identity=30.7692307692308, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI261878507, Length=336, Percent_Identity=24.702380952381, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55073; Mature: 54941
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTLVILLMLAATRGGAQPIVLAPRTMPRTGAVDPRFQSYNIEMVEVTGGRFWKPYASA CCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCEECCCEEEEEECCCCEECCHHCC APASAPKPDAAPAGLPADLLEYRPPIDLANARLRKLAATLGPTYIRVSGTWANTIYFHDS CCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEECC DDAAPEKPPAGFNAILTRKQWKGVIDFVQAAEGRLVTSFAFGAGNRDTAGAWTPDQARHV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHCCEE IAYTKAAGGSIAAAEFMNEPNYAAQGGAIRGYDAAAYGRDIETFRRFFREAAPGSLFLGP EEEEECCCCCCHHHHHHCCCCCCCCCCCEECCCHHHHCCCHHHHHHHHHHCCCCEEEECC GSTGEGGVLGKIPTPGKLQTEDLLKATGPVFDVFSYHIYAAVSQRCSGPMPSIGTTAAAA CCCCCCCEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RSSEWLSRPDKIHAFYADLRDRYLPGKPLWVTEVADAGCGGNPWASTFLDTFRYLNQHGR HCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCH LAQQGVQMIAHNTLSASDYGLLDEKTYDPRPNYWGAVLWHRLMGTTVLNPVTKAADDLYL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE YAHCQAGHPSGVTVLAINAGTTARELDAPMGAERYTLSAAQPDSPTVQLNGRTLEASADG EEEECCCCCCCEEEEEEECCCCHHHHCCCCCCCEEEEECCCCCCCEEEECCEEEEECCCC GLPPLTGAPVRAGRTSLPAASITFLVFPDAANQSCR CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure TRTLVILLMLAATRGGAQPIVLAPRTMPRTGAVDPRFQSYNIEMVEVTGGRFWKPYASA CHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCEECCCEEEEEECCCCEECCHHCC APASAPKPDAAPAGLPADLLEYRPPIDLANARLRKLAATLGPTYIRVSGTWANTIYFHDS CCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEECC DDAAPEKPPAGFNAILTRKQWKGVIDFVQAAEGRLVTSFAFGAGNRDTAGAWTPDQARHV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHCCEE IAYTKAAGGSIAAAEFMNEPNYAAQGGAIRGYDAAAYGRDIETFRRFFREAAPGSLFLGP EEEEECCCCCCHHHHHHCCCCCCCCCCCEECCCHHHHCCCHHHHHHHHHHCCCCEEEECC GSTGEGGVLGKIPTPGKLQTEDLLKATGPVFDVFSYHIYAAVSQRCSGPMPSIGTTAAAA CCCCCCCEEECCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RSSEWLSRPDKIHAFYADLRDRYLPGKPLWVTEVADAGCGGNPWASTFLDTFRYLNQHGR HCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCH LAQQGVQMIAHNTLSASDYGLLDEKTYDPRPNYWGAVLWHRLMGTTVLNPVTKAADDLYL HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE YAHCQAGHPSGVTVLAINAGTTARELDAPMGAERYTLSAAQPDSPTVQLNGRTLEASADG EEEECCCCCCCEEEEEEECCCCHHHHCCCCCCCEEEEECCCCCCCEEEECCEEEEECCCC GLPPLTGAPVRAGRTSLPAASITFLVFPDAANQSCR CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA