Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622192
Identifier: 116622192
GI number: 116622192
Start: 3900754
End: 3901368
Strand: Direct
Name: 116622192
Synonym: Acid_3084
Alternate gene names: NA
Gene position: 3900754-3901368 (Clockwise)
Preceding gene: 116622183
Following gene: 116622194
Centisome position: 39.14
GC content: 62.6
Gene sequence:
>615_bases ATGGCTTCCCCCGCCCAGATCAACGCCAACCAGGCTAACGCCCAGCTCTCCACCGGACCGCGCACCGTCGAAGGTAAAGC GCGTATCTCCCAAAATGCCGTCCGCCACGGCCTCACCGCCCGCCACCTCGTCATCCGCGACGACGAAAAGGACGACTTCG CTGCTCTTAACGATTCGCTCTTCGAGGAGCTCGATCCTCAAGGCGCCCTCGAGACCATCACCTTCCACGAACTCCTCCAC GCCGCCTGGAATCTCCAACGCTTCAGCCGCATCGAAGCCGAAGTCTCCCTCGGCACCGCCGACGACTTTACCGACCCCGG CGCCGCCGCCGTCCTCGATCGCCTCGCCCGCTATCAGTCCCGCGCCCAGCGGGCATTCTATAAAGCCCAGACCGAACTTC GGATCCTCCAGACCAACCGCGCCCTGCGCGCCCGCAAATTGACCGCGGAGGAAGATGCCAAGGTCCCCGCCAATGTCTCA ATCAACGATTTGACCAAACAAACCCATTCCGAGGTCACCGCCGAAGCCATCGACATCGCCGTCCGTCTCTTAAACTACGA AGCCGGCGTCGGCACCCTCACAGCCTTCAAAAAACGTGACGAGCCCCGACCGTGA
Upstream 100 bases:
>100_bases CGAACATCAGATTTATTTTAGGCTTTCTTTCAAGCACTTGCCTGCTTTTCCGCCGATTTGGCGTAAGTCGTGATGTTAGC TTCTCCGTGAAAGGAATTTT
Downstream 100 bases:
>100_bases GGGAGCGAACGAACTCCCGCTCCTCCCCAGCGCTACTCCATCAGAGCCGACCGTAAAGTAAGGGAGCGTCCGTTGTACGT GTAAACCACGATTTCAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MASPAQINANQANAQLSTGPRTVEGKARISQNAVRHGLTARHLVIRDDEKDDFAALNDSLFEELDPQGALETITFHELLH AAWNLQRFSRIEAEVSLGTADDFTDPGAAAVLDRLARYQSRAQRAFYKAQTELRILQTNRALRARKLTAEEDAKVPANVS INDLTKQTHSEVTAEAIDIAVRLLNYEAGVGTLTAFKKRDEPRP
Sequences:
>Translated_204_residues MASPAQINANQANAQLSTGPRTVEGKARISQNAVRHGLTARHLVIRDDEKDDFAALNDSLFEELDPQGALETITFHELLH AAWNLQRFSRIEAEVSLGTADDFTDPGAAAVLDRLARYQSRAQRAFYKAQTELRILQTNRALRARKLTAEEDAKVPANVS INDLTKQTHSEVTAEAIDIAVRLLNYEAGVGTLTAFKKRDEPRP >Mature_203_residues ASPAQINANQANAQLSTGPRTVEGKARISQNAVRHGLTARHLVIRDDEKDDFAALNDSLFEELDPQGALETITFHELLHA AWNLQRFSRIEAEVSLGTADDFTDPGAAAVLDRLARYQSRAQRAFYKAQTELRILQTNRALRARKLTAEEDAKVPANVSI NDLTKQTHSEVTAEAIDIAVRLLNYEAGVGTLTAFKKRDEPRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22573; Mature: 22442
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPAQINANQANAQLSTGPRTVEGKARISQNAVRHGLTARHLVIRDDEKDDFAALNDSL CCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH FEELDPQGALETITFHELLHAAWNLQRFSRIEAEVSLGTADDFTDPGAAAVLDRLARYQS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHH RAQRAFYKAQTELRILQTNRALRARKLTAEEDAKVPANVSINDLTKQTHSEVTAEAIDIA HHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VRLLNYEAGVGTLTAFKKRDEPRP HHHHHCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure ASPAQINANQANAQLSTGPRTVEGKARISQNAVRHGLTARHLVIRDDEKDDFAALNDSL CCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHH FEELDPQGALETITFHELLHAAWNLQRFSRIEAEVSLGTADDFTDPGAAAVLDRLARYQS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHH RAQRAFYKAQTELRILQTNRALRARKLTAEEDAKVPANVSINDLTKQTHSEVTAEAIDIA HHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VRLLNYEAGVGTLTAFKKRDEPRP HHHHHCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA