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The map label for this gene is yxeQ [H]

Identifier: 116622183

GI number: 116622183

Start: 3883169

End: 3884605

Strand: Direct

Name: yxeQ [H]

Synonym: Acid_3075

Alternate gene names: 116622183

Gene position: 3883169-3884605 (Clockwise)

Preceding gene: 116622182

Following gene: 116622192

Centisome position: 38.97

GC content: 65.69

Gene sequence:

>1437_bases
ATGAAGCGCATCGATCGCCGGCGTTTTCTGACCGCCTCAGCGATGGCGGGAACCATGGCAGCGAACGCTGCCCCGCTACC
GGAAGAGACGGTCGCGGCGGCCAGGGATGTCACCGTGAAGTTGGCCCGCTATGTGGTCAACGCACGCCGCGACAATGTGC
CGGCCGTGGTCCGCAAAGAGGCCGCGCGAACCCTGCTCAACTGGGTGGGCTGCGCGGTGGGAGGGTCGCGGCACGAAACC
GTGGACCTCGCCATCCGCGCGCTCTCCCCATTTTCGGGCCCGGCGCAAGCCGGCGTGCTGGGGCGCAAGGAGCGGCTGGA
CGTGCTGAATGCCGCGCTCATGAACGGGATCAGCTCCCACATCTTCGATTTCGACGATACGCACCTGCGCACCATCGTGC
ATCCCGCCGGTCCGGTGGCCTCAGCGATTCTCGCCTTCTCCGAGTACCGTCCGGTTTCCGGTGCGGATCTACTGCACGCG
CTCATTCTGGGCGCGGAGGTGGAGTGCCGCATCGCCAACGCCGTGTACCCCGCGCATTACGACGTGGGTTGGCACATCAC
CGGGACGGTCGGTCCGTTCGGCGCAGCCGCGGCCGCCGGCAAGCTGATGAAGCTCTCGGAACAGCAAATGGTCTGGGCCC
TCGGACTGGCGGCGACCCAGCCCGTCGGTCTGCGCGAGATGTTCGGCACCATGACAAAGAGCTTTCATCCGGGCCGTGCG
GCGCAGAATGGCCTCACCGCGGCACTCCTCGCCGCACAGAATTTCACCAGCTCAAACCAGGGCATCGAGGCCGCGCGGGG
CTGGGCCAACGTCCTCAGCACGGCACGCAACTATGGCGAGATTACGGACAACCTCGGCGCCCACTACGAGATCTCCCTGA
ACACGTACAAACCCTTCCCCTGCGGCATCGTCATCCACCCGGCGATCGATGGCTGCCTGCAACTGCGCGCCCGGTACCGT
CTGGCGCCGGAGCAGATTGAGCGCGTCGAGCTCAAGGTTCACCCGCTGGTGCTGGAACTGACCGCGAAGAAGGCGCCGCA
GGCCGGGCTCGAGGGCAAGTTCAGCGTGTATCACGCGGTCGCGGCGGCCGTGGTGCGCGGAGTGGTTGGGGAAGCCGAGT
TCAGCGACCAGGCGGTCACCGACGCCGGCATCGTCGCTCTTCGTGGGAAGGTCATCGCCGCGATCGATCGGTCCATCGCC
GAAGACCAGGTGCGCATCATCGTGACTCTGAAAGATGGCCGGCGCCTGGAGAATTACATCGAGCACGCCACCGGCAGCGC
GAAGAACCCGATGACGGATGCCCAACTCGAAGCCAAGTTCAACGGTTTGGCCGAGGGTGTGCTCAAGCCCGACCGGGTCC
GGAGGTTGATCGACTTGTGTTGGAACATCGAAAAGTCCGGTGACGCGGGCGAAGTTGCACGCACCGCGGCAGCATGA

Upstream 100 bases:

>100_bases
CCGTGATGGCGGTGGAGCCGTTTATCGACTTCACCATCCAGCCGGGCGAAAGCTATGCCTGGACGCTGACGTACCGCTAT
CTGAAGCAAGGCGAATAGGC

Downstream 100 bases:

>100_bases
CACCGCTACTGCCGTGCGGTGTTTACAATCCAGTCTTGGCGCCCTCGTCGGCCTCTCGGGCCGGCGTCATGCGTATGTGA
TCGGGTGCGCTGCCAGCCAC

Product: MmgE/PrpD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MKRIDRRRFLTASAMAGTMAANAAPLPEETVAAARDVTVKLARYVVNARRDNVPAVVRKEAARTLLNWVGCAVGGSRHET
VDLAIRALSPFSGPAQAGVLGRKERLDVLNAALMNGISSHIFDFDDTHLRTIVHPAGPVASAILAFSEYRPVSGADLLHA
LILGAEVECRIANAVYPAHYDVGWHITGTVGPFGAAAAAGKLMKLSEQQMVWALGLAATQPVGLREMFGTMTKSFHPGRA
AQNGLTAALLAAQNFTSSNQGIEAARGWANVLSTARNYGEITDNLGAHYEISLNTYKPFPCGIVIHPAIDGCLQLRARYR
LAPEQIERVELKVHPLVLELTAKKAPQAGLEGKFSVYHAVAAAVVRGVVGEAEFSDQAVTDAGIVALRGKVIAAIDRSIA
EDQVRIIVTLKDGRRLENYIEHATGSAKNPMTDAQLEAKFNGLAEGVLKPDRVRRLIDLCWNIEKSGDAGEVARTAAA

Sequences:

>Translated_478_residues
MKRIDRRRFLTASAMAGTMAANAAPLPEETVAAARDVTVKLARYVVNARRDNVPAVVRKEAARTLLNWVGCAVGGSRHET
VDLAIRALSPFSGPAQAGVLGRKERLDVLNAALMNGISSHIFDFDDTHLRTIVHPAGPVASAILAFSEYRPVSGADLLHA
LILGAEVECRIANAVYPAHYDVGWHITGTVGPFGAAAAAGKLMKLSEQQMVWALGLAATQPVGLREMFGTMTKSFHPGRA
AQNGLTAALLAAQNFTSSNQGIEAARGWANVLSTARNYGEITDNLGAHYEISLNTYKPFPCGIVIHPAIDGCLQLRARYR
LAPEQIERVELKVHPLVLELTAKKAPQAGLEGKFSVYHAVAAAVVRGVVGEAEFSDQAVTDAGIVALRGKVIAAIDRSIA
EDQVRIIVTLKDGRRLENYIEHATGSAKNPMTDAQLEAKFNGLAEGVLKPDRVRRLIDLCWNIEKSGDAGEVARTAAA
>Mature_478_residues
MKRIDRRRFLTASAMAGTMAANAAPLPEETVAAARDVTVKLARYVVNARRDNVPAVVRKEAARTLLNWVGCAVGGSRHET
VDLAIRALSPFSGPAQAGVLGRKERLDVLNAALMNGISSHIFDFDDTHLRTIVHPAGPVASAILAFSEYRPVSGADLLHA
LILGAEVECRIANAVYPAHYDVGWHITGTVGPFGAAAAAGKLMKLSEQQMVWALGLAATQPVGLREMFGTMTKSFHPGRA
AQNGLTAALLAAQNFTSSNQGIEAARGWANVLSTARNYGEITDNLGAHYEISLNTYKPFPCGIVIHPAIDGCLQLRARYR
LAPEQIERVELKVHPLVLELTAKKAPQAGLEGKFSVYHAVAAAVVRGVVGEAEFSDQAVTDAGIVALRGKVIAAIDRSIA
EDQVRIIVTLKDGRRLENYIEHATGSAKNPMTDAQLEAKFNGLAEGVLKPDRVRRLIDLCWNIEKSGDAGEVARTAAA

Specific function: Unknown

COG id: COG2079

COG function: function code R; Uncharacterized protein involved in propionate catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prpD family [H]

Homologues:

Organism=Homo sapiens, GI310129732, Length=442, Percent_Identity=27.6018099547511, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI310110533, Length=442, Percent_Identity=27.6018099547511, Blast_Score=115, Evalue=7e-26,
Organism=Homo sapiens, GI310123058, Length=441, Percent_Identity=27.437641723356, Blast_Score=114, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005656 [H]

Pfam domain/function: PF03972 MmgE_PrpD [H]

EC number: NA

Molecular weight: Translated: 51122; Mature: 51122

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIDRRRFLTASAMAGTMAANAAPLPEETVAAARDVTVKLARYVVNARRDNVPAVVRKE
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AARTLLNWVGCAVGGSRHETVDLAIRALSPFSGPAQAGVLGRKERLDVLNAALMNGISSH
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHH
IFDFDDTHLRTIVHPAGPVASAILAFSEYRPVSGADLLHALILGAEVECRIANAVYPAHY
CCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEE
DVGWHITGTVGPFGAAAAAGKLMKLSEQQMVWALGLAATQPVGLREMFGTMTKSFHPGRA
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH
AQNGLTAALLAAQNFTSSNQGIEAARGWANVLSTARNYGEITDNLGAHYEISLNTYKPFP
HHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
CGIVIHPAIDGCLQLRARYRLAPEQIERVELKVHPLVLELTAKKAPQAGLEGKFSVYHAV
CCEEEECHHHHHHHHHHHHCCCHHHHHHHHEEECEEEEEEECCCCCCCCCCCCHHHHHHH
AAAVVRGVVGEAEFSDQAVTDAGIVALRGKVIAAIDRSIAEDQVRIIVTLKDGRRLENYI
HHHHHHHHHCCCCCCCCHHHHCCCHHHCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHH
EHATGSAKNPMTDAQLEAKFNGLAEGVLKPDRVRRLIDLCWNIEKSGDAGEVARTAAA
HHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKRIDRRRFLTASAMAGTMAANAAPLPEETVAAARDVTVKLARYVVNARRDNVPAVVRKE
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AARTLLNWVGCAVGGSRHETVDLAIRALSPFSGPAQAGVLGRKERLDVLNAALMNGISSH
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHH
IFDFDDTHLRTIVHPAGPVASAILAFSEYRPVSGADLLHALILGAEVECRIANAVYPAHY
CCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCCCCEE
DVGWHITGTVGPFGAAAAAGKLMKLSEQQMVWALGLAATQPVGLREMFGTMTKSFHPGRA
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH
AQNGLTAALLAAQNFTSSNQGIEAARGWANVLSTARNYGEITDNLGAHYEISLNTYKPFP
HHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
CGIVIHPAIDGCLQLRARYRLAPEQIERVELKVHPLVLELTAKKAPQAGLEGKFSVYHAV
CCEEEECHHHHHHHHHHHHCCCHHHHHHHHEEECEEEEEEECCCCCCCCCCCCHHHHHHH
AAAVVRGVVGEAEFSDQAVTDAGIVALRGKVIAAIDRSIAEDQVRIIVTLKDGRRLENYI
HHHHHHHHHCCCCCCCCHHHHCCCHHHCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHH
EHATGSAKNPMTDAQLEAKFNGLAEGVLKPDRVRRLIDLCWNIEKSGDAGEVARTAAA
HHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]