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The map label for this gene is etfB [H]

Identifier: 116622188

GI number: 116622188

Start: 3896285

End: 3897067

Strand: Reverse

Name: etfB [H]

Synonym: Acid_3080

Alternate gene names: 116622188

Gene position: 3897067-3896285 (Counterclockwise)

Preceding gene: 116622189

Following gene: 116622187

Centisome position: 39.11

GC content: 64.11

Gene sequence:

>783_bases
ATGGAGATCCTGGTTTGCGCGAAGAGAGTGCCGGATACTTCGGAAAACGAGATCCAGCTGGACGCCTCCGGCGCCGATAT
CGAACGCGACGACCTTGTCTATTCGGTCAACGAGTCCGATAACTATGCCGTGGAGGAGGCGCTGCAGATTGTGGCGCGTA
CCGGCGGCAGCGTCACGGTGGTGACGGTGGGCGGCGAAGAGGACGAGGAGATTCTCCGCCGCGAGATGGCGATGGGCGCC
GGCAGCGCCGTGCTCATCTCCGACCCCGCGTTCCGCGGGTCCGACGGCCGCGGGATCGCGGCCATCCTGAAGGCCTTTGT
CGATACCGGGAAATACGACCTGATCCTGACCGGCGTACAGGCCGACGATGGGTGCGCGCAGGTGGGCGGAATGCTGGCAG
CCATGCTGGATTACCCGTTCGCCTCGCTGGTTACCTCGATCGAGGTGATGCAGGGGCGCGAGCTCAAGATCGGCCGGGAG
ATCGAAGGCGGCAGCAGGGAAATCAACAGCATCGAACTGCCGTGTGTGCTCTCGATTCAGACCGGGATCAACGAGCCGCG
CTACGTCGGGATGCGCGGCATCCGGCAGGTTGCCTCGGTGCCGATTCCGACGCTGGGCGCGGGGGACCTGAAGGCCGATG
CAGGGGAATGCGCGGCGAAGGTAAGGCGGCTGGATTACTTTGTGCCTCCGGCCGGCAAGGGCGCGGAGATGCTCGAAGGC
AAGCGCGAGGACGTGGTGGAGCAGTTGATGAATCTGCTCAAGGCCAAGGGAGGGTTGAACTAA

Upstream 100 bases:

>100_bases
GAAGACGCCATCAAGGTGGCGGGTTTGGAAGGACAGATGGCGGCGATCGACCTGGCGGAACTGGTGGATCGCCAAATGAC
GAGTTGAGGAGATACCCAAG

Downstream 100 bases:

>100_bases
TGGCACGGATTTTCGCTTTCATTGTTCACAAAGCCGGCGTCGCGGATGACTCGGCGGCCGAACTGCCCGTGGCGGCAGCG
AAGATCGACCCCGCGCAGCC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MEILVCAKRVPDTSENEIQLDASGADIERDDLVYSVNESDNYAVEEALQIVARTGGSVTVVTVGGEEDEEILRREMAMGA
GSAVLISDPAFRGSDGRGIAAILKAFVDTGKYDLILTGVQADDGCAQVGGMLAAMLDYPFASLVTSIEVMQGRELKIGRE
IEGGSREINSIELPCVLSIQTGINEPRYVGMRGIRQVASVPIPTLGAGDLKADAGECAAKVRRLDYFVPPAGKGAEMLEG
KREDVVEQLMNLLKAKGGLN

Sequences:

>Translated_260_residues
MEILVCAKRVPDTSENEIQLDASGADIERDDLVYSVNESDNYAVEEALQIVARTGGSVTVVTVGGEEDEEILRREMAMGA
GSAVLISDPAFRGSDGRGIAAILKAFVDTGKYDLILTGVQADDGCAQVGGMLAAMLDYPFASLVTSIEVMQGRELKIGRE
IEGGSREINSIELPCVLSIQTGINEPRYVGMRGIRQVASVPIPTLGAGDLKADAGECAAKVRRLDYFVPPAGKGAEMLEG
KREDVVEQLMNLLKAKGGLN
>Mature_260_residues
MEILVCAKRVPDTSENEIQLDASGADIERDDLVYSVNESDNYAVEEALQIVARTGGSVTVVTVGGEEDEEILRREMAMGA
GSAVLISDPAFRGSDGRGIAAILKAFVDTGKYDLILTGVQADDGCAQVGGMLAAMLDYPFASLVTSIEVMQGRELKIGRE
IEGGSREINSIELPCVLSIQTGINEPRYVGMRGIRQVASVPIPTLGAGDLKADAGECAAKVRRLDYFVPPAGKGAEMLEG
KREDVVEQLMNLLKAKGGLN

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=220, Percent_Identity=32.7272727272727, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI62420877, Length=204, Percent_Identity=32.3529411764706, Blast_Score=88, Evalue=6e-18,
Organism=Escherichia coli, GI2367123, Length=239, Percent_Identity=27.1966527196653, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI87081682, Length=218, Percent_Identity=27.5229357798165, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI25141345, Length=262, Percent_Identity=30.1526717557252, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6321646, Length=209, Percent_Identity=32.5358851674641, Blast_Score=101, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24651147, Length=218, Percent_Identity=32.1100917431193, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24651145, Length=218, Percent_Identity=32.1100917431193, Blast_Score=82, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27607; Mature: 27607

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILVCAKRVPDTSENEIQLDASGADIERDDLVYSVNESDNYAVEEALQIVARTGGSVTV
CCEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEE
VTVGGEEDEEILRREMAMGAGSAVLISDPAFRGSDGRGIAAILKAFVDTGKYDLILTGVQ
EEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECC
ADDGCAQVGGMLAAMLDYPFASLVTSIEVMQGRELKIGREIEGGSREINSIELPCVLSIQ
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEECCCEEEEEC
TGINEPRYVGMRGIRQVASVPIPTLGAGDLKADAGECAAKVRRLDYFVPPAGKGAEMLEG
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHCC
KREDVVEQLMNLLKAKGGLN
CHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEILVCAKRVPDTSENEIQLDASGADIERDDLVYSVNESDNYAVEEALQIVARTGGSVTV
CCEEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEE
VTVGGEEDEEILRREMAMGAGSAVLISDPAFRGSDGRGIAAILKAFVDTGKYDLILTGVQ
EEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECC
ADDGCAQVGGMLAAMLDYPFASLVTSIEVMQGRELKIGREIEGGSREINSIELPCVLSIQ
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEECCCEEEEEC
TGINEPRYVGMRGIRQVASVPIPTLGAGDLKADAGECAAKVRRLDYFVPPAGKGAEMLEG
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHCC
KREDVVEQLMNLLKAKGGLN
CHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]