Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is etfA [H]
Identifier: 116622187
GI number: 116622187
Start: 3895287
End: 3896285
Strand: Reverse
Name: etfA [H]
Synonym: Acid_3079
Alternate gene names: 116622187
Gene position: 3896285-3895287 (Counterclockwise)
Preceding gene: 116622188
Following gene: 116622186
Centisome position: 39.1
GC content: 64.76
Gene sequence:
>999_bases ATGGCACGGATTTTCGCTTTCATTGTTCACAAAGCCGGCGTCGCGGATGACTCGGCGGCCGAACTGCCCGTGGCGGCAGC GAAGATCGACCCCGCGCAGCCGTGTACGGCCATCGTGGCCGGATGGGGCGCCGGGTTGGACCAGGTCTGCGACGGTCTGC GTGCCACCTACAGCGAGATCTGGAAGGTCGCCAACGAGTCCCTGGCGTACCCGAACGCCGAACTGGTTCGCAAGGCGCTG GTGAACGTGGCGCCGGCAGGCAGCGTACTGCTGATTCCACACTCGCATTTTGGAGTGGATCTCTCGCCGGGGCTTTCGGT GAAGATGAACGCGGCGTATGTTCCGGACGTGGTGGATATCGAGCGGCGCGACGGGAACAACCTGCGGGTAGTTCGACAGG AGTTCGGCGGACAGGTAAGCGCGCACGTGCAGTGCGACTTGTCTGCCGGTGCGGTGCTGAATATTCGCCCGGGGGCATTC CGCGCGGTGCAGGCGCCGGTCAATGGCCAGGTAGTAGACAAATCGGCGGCCGCCGGCACGCCTACCGCCCGGCGACGCTA TCTGGAGACGATTTCGCCGGAGGCCGGCGACGTGGATATCACCAAGGAGCCCGTGCTGATCTCGATCGGGCGCGGAATCG GCGAGCAGGAGAACGTGGCGGTCGCCGAAGACCTGGCGGCGGCCATGGGCGCAGCGGTCAGTTGCTCACGGCCGGTGGTG GACGCCAAGTGGATGGATAAATCGCGGCAGGTGGGTTCGTCGGGGCAGACGGTGCGGCCGAAGGTGTACCTGGCTTGCGG CATCAGCGGATCTTTCCAGCACCTGGCGGGAATCAAGGGAGCTCCGTTCCTGGTGGCGATCAACAAGAACGCCAAGGCGC CGATCTTCCGCGCGGCCGATGTGGGGATCGTAGACGACCTGCTGGAGTTTCTTCCGGCGCTGGCAAATCGGGTTCGCGAG GAGAGTTGTGTACCGGGCAATGAAAGGCGGCGGTCATGA
Upstream 100 bases:
>100_bases TGCCTCCGGCCGGCAAGGGCGCGGAGATGCTCGAAGGCAAGCGCGAGGACGTGGTGGAGCAGTTGATGAATCTGCTCAAG GCCAAGGGAGGGTTGAACTA
Downstream 100 bases:
>100_bases TTACGGGGAAGACATTAAAGCTCAGCTTGAAATCGCTGCGGGAGTTCGCCAAGAAGCGATTGCCCGACCAGGAGTTGATC GCGCTGGATGCACGGGACGA
Product: electron transfer flavoprotein subunit alpha
Products: NA
Alternate protein names: Alpha-ETF; Electron transfer flavoprotein large subunit; ETFLS [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MARIFAFIVHKAGVADDSAAELPVAAAKIDPAQPCTAIVAGWGAGLDQVCDGLRATYSEIWKVANESLAYPNAELVRKAL VNVAPAGSVLLIPHSHFGVDLSPGLSVKMNAAYVPDVVDIERRDGNNLRVVRQEFGGQVSAHVQCDLSAGAVLNIRPGAF RAVQAPVNGQVVDKSAAAGTPTARRRYLETISPEAGDVDITKEPVLISIGRGIGEQENVAVAEDLAAAMGAAVSCSRPVV DAKWMDKSRQVGSSGQTVRPKVYLACGISGSFQHLAGIKGAPFLVAINKNAKAPIFRAADVGIVDDLLEFLPALANRVRE ESCVPGNERRRS
Sequences:
>Translated_332_residues MARIFAFIVHKAGVADDSAAELPVAAAKIDPAQPCTAIVAGWGAGLDQVCDGLRATYSEIWKVANESLAYPNAELVRKAL VNVAPAGSVLLIPHSHFGVDLSPGLSVKMNAAYVPDVVDIERRDGNNLRVVRQEFGGQVSAHVQCDLSAGAVLNIRPGAF RAVQAPVNGQVVDKSAAAGTPTARRRYLETISPEAGDVDITKEPVLISIGRGIGEQENVAVAEDLAAAMGAAVSCSRPVV DAKWMDKSRQVGSSGQTVRPKVYLACGISGSFQHLAGIKGAPFLVAINKNAKAPIFRAADVGIVDDLLEFLPALANRVRE ESCVPGNERRRS >Mature_331_residues ARIFAFIVHKAGVADDSAAELPVAAAKIDPAQPCTAIVAGWGAGLDQVCDGLRATYSEIWKVANESLAYPNAELVRKALV NVAPAGSVLLIPHSHFGVDLSPGLSVKMNAAYVPDVVDIERRDGNNLRVVRQEFGGQVSAHVQCDLSAGAVLNIRPGAFR AVQAPVNGQVVDKSAAAGTPTARRRYLETISPEAGDVDITKEPVLISIGRGIGEQENVAVAEDLAAAMGAAVSCSRPVVD AKWMDKSRQVGSSGQTVRPKVYLACGISGSFQHLAGIKGAPFLVAINKNAKAPIFRAADVGIVDDLLEFLPALANRVREE SCVPGNERRRS
Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]
COG id: COG2025
COG function: function code C; Electron transfer flavoprotein, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ETF alpha-subunit/fixB family [H]
Homologues:
Organism=Homo sapiens, GI4503607, Length=227, Percent_Identity=34.8017621145374, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI189181759, Length=227, Percent_Identity=34.8017621145374, Blast_Score=130, Evalue=1e-30, Organism=Escherichia coli, GI1786226, Length=230, Percent_Identity=35.6521739130435, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1787990, Length=251, Percent_Identity=33.0677290836653, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI87082157, Length=259, Percent_Identity=30.5019305019305, Blast_Score=78, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17506929, Length=220, Percent_Identity=32.2727272727273, Blast_Score=111, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6325261, Length=296, Percent_Identity=25.6756756756757, Blast_Score=98, Evalue=2e-21, Organism=Drosophila melanogaster, GI17136898, Length=229, Percent_Identity=30.5676855895196, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24652801, Length=229, Percent_Identity=30.5676855895196, Blast_Score=116, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001308 - InterPro: IPR014730 - InterPro: IPR014731 - InterPro: IPR018206 - InterPro: IPR014729 [H]
Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]
EC number: NA
Molecular weight: Translated: 34904; Mature: 34773
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIFAFIVHKAGVADDSAAELPVAAAKIDPAQPCTAIVAGWGAGLDQVCDGLRATYSEI CHHHHEEHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH WKVANESLAYPNAELVRKALVNVAPAGSVLLIPHSHFGVDLSPGLSVKMNAAYVPDVVDI HHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCEEEECCEECCCCEEE ERRDGNNLRVVRQEFGGQVSAHVQCDLSAGAVLNIRPGAFRAVQAPVNGQVVDKSAAAGT ECCCCCCEEEEHHHHCCCEEEEEEEECCCCEEEEECCCCCEEEECCCCCEEEECCCCCCC PTARRRYLETISPEAGDVDITKEPVLISIGRGIGEQENVAVAEDLAAAMGAAVSCSRPVV CHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHCCCCCCC DAKWMDKSRQVGSSGQTVRPKVYLACGISGSFQHLAGIKGAPFLVAINKNAKAPIFRAAD CHHHCCHHHHCCCCCCEECCEEEEEECCCCCHHHHHCCCCCCEEEEECCCCCCCEEEECC VGIVDDLLEFLPALANRVREESCVPGNERRRS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure ARIFAFIVHKAGVADDSAAELPVAAAKIDPAQPCTAIVAGWGAGLDQVCDGLRATYSEI HHHHEEHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH WKVANESLAYPNAELVRKALVNVAPAGSVLLIPHSHFGVDLSPGLSVKMNAAYVPDVVDI HHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCCEEEECCEECCCCEEE ERRDGNNLRVVRQEFGGQVSAHVQCDLSAGAVLNIRPGAFRAVQAPVNGQVVDKSAAAGT ECCCCCCEEEEHHHHCCCEEEEEEEECCCCEEEEECCCCCEEEECCCCCEEEECCCCCCC PTARRRYLETISPEAGDVDITKEPVLISIGRGIGEQENVAVAEDLAAAMGAAVSCSRPVV CHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHCCHHCCCCCCC DAKWMDKSRQVGSSGQTVRPKVYLACGISGSFQHLAGIKGAPFLVAINKNAKAPIFRAAD CHHHCCHHHHCCCCCCEECCEEEEEECCCCCHHHHHCCCCCCEEEEECCCCCCCEEEECC VGIVDDLLEFLPALANRVREESCVPGNERRRS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8655474; 11466286 [H]