Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622169
Identifier: 116622169
GI number: 116622169
Start: 3859679
End: 3860227
Strand: Reverse
Name: 116622169
Synonym: Acid_3061
Alternate gene names: NA
Gene position: 3860227-3859679 (Counterclockwise)
Preceding gene: 116622170
Following gene: 116622168
Centisome position: 38.74
GC content: 54.28
Gene sequence:
>549_bases ATGGAAATGGTTGCGTTACTCAAATCCATCGACGGAGTTGTCCACGGCGGCAAAGCCATAGTATCTGCCGATAACAGCAT CATCGTCGCCATGGTGCAGGAGGCGCTAAGGCACGGTAGAACCGCTACCTTCTATGTCTCCCCGGAACAGGGTCAGGCTG TCATGCGATGGTATTGGACGCCCGGGAGAGTCAAGGAAATCGGCATGGAGCCGGTATCAAAGGAAGAGCGAGCCAGGATC GAGTCCGAGCTCGGATTCAAGTGCGCCGGAACGTGGTTCTCCAATCGCCTTGAATGCACCTGCGGAGCCGTGTACGGCAT GTTCGAATTCATGCAGCAGGGACTCCGCGAACACGATCGGGATTGGATCAAAGCGGTTCTGGACCTCAAGAATACCGCCG TCCTTCGCATCAATCCTTCCCTGGATGCGTTCTGCCCTCAATGCAACCAGCTATTCATTCACGGACACTGGTACGAGATG AAGAAGAGTGACGGCACCCTGATTTACGGGTGTTGTAAAGGTGAGATACCAGGGACCATACTTACTTGA
Upstream 100 bases:
>100_bases AGGAAGAACCCGGAGTTTTCTTCGTTCTGGATTTTTCGACACGCTGCCTCTTCATCATTCCTGTGTATACTCTCAGAAAA TCAGCATACGGAGGTGTCAG
Downstream 100 bases:
>100_bases GTTAGTCATTGCGCAGACGGCTGATGATGCTCTGCAAGGTCACGAGGGAATTGGGCTTCTGCCTCATCTACAAGAACGCC TCGAGCAGCGTGCGCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MEMVALLKSIDGVVHGGKAIVSADNSIIVAMVQEALRHGRTATFYVSPEQGQAVMRWYWTPGRVKEIGMEPVSKEERARI ESELGFKCAGTWFSNRLECTCGAVYGMFEFMQQGLREHDRDWIKAVLDLKNTAVLRINPSLDAFCPQCNQLFIHGHWYEM KKSDGTLIYGCCKGEIPGTILT
Sequences:
>Translated_182_residues MEMVALLKSIDGVVHGGKAIVSADNSIIVAMVQEALRHGRTATFYVSPEQGQAVMRWYWTPGRVKEIGMEPVSKEERARI ESELGFKCAGTWFSNRLECTCGAVYGMFEFMQQGLREHDRDWIKAVLDLKNTAVLRINPSLDAFCPQCNQLFIHGHWYEM KKSDGTLIYGCCKGEIPGTILT >Mature_182_residues MEMVALLKSIDGVVHGGKAIVSADNSIIVAMVQEALRHGRTATFYVSPEQGQAVMRWYWTPGRVKEIGMEPVSKEERARI ESELGFKCAGTWFSNRLECTCGAVYGMFEFMQQGLREHDRDWIKAVLDLKNTAVLRINPSLDAFCPQCNQLFIHGHWYEM KKSDGTLIYGCCKGEIPGTILT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20465; Mature: 20465
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMVALLKSIDGVVHGGKAIVSADNSIIVAMVQEALRHGRTATFYVSPEQGQAVMRWYWT CHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEC PGRVKEIGMEPVSKEERARIESELGFKCAGTWFSNRLECTCGAVYGMFEFMQQGLREHDR CCCHHHCCCCCCCHHHHHHHHHHCCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH DWIKAVLDLKNTAVLRINPSLDAFCPQCNQLFIHGHWYEMKKSDGTLIYGCCKGEIPGTI HHHHHHHHCCCCEEEEECCCCHHHCCCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCC LT CC >Mature Secondary Structure MEMVALLKSIDGVVHGGKAIVSADNSIIVAMVQEALRHGRTATFYVSPEQGQAVMRWYWT CHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEC PGRVKEIGMEPVSKEERARIESELGFKCAGTWFSNRLECTCGAVYGMFEFMQQGLREHDR CCCHHHCCCCCCCHHHHHHHHHHCCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH DWIKAVLDLKNTAVLRINPSLDAFCPQCNQLFIHGHWYEMKKSDGTLIYGCCKGEIPGTI HHHHHHHHCCCCEEEEECCCCHHHCCCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCC LT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA