Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is yghX [H]
Identifier: 116622154
GI number: 116622154
Start: 3844912
End: 3845832
Strand: Reverse
Name: yghX [H]
Synonym: Acid_3046
Alternate gene names: 116622154
Gene position: 3845832-3844912 (Counterclockwise)
Preceding gene: 116622155
Following gene: 116622152
Centisome position: 38.59
GC content: 63.08
Gene sequence:
>921_bases ATGCACGAAATGGAAAAGACATCGAAAATTTCAAGCGGCGCGATTCAACTTTACAACCTGTTCATTCACGGCGAAATTGA CCGGCGCGCCTTCATGGAAGGCTTGCAGAAATTCGCAGCCGGCAGCATGACCGTGGCGGCGCTGGCCCAGGCGCTGATGC CGAACTACGCGGCGGGGCAGCAGGTATCGCGCACCGACGAGCGGATCAAGACCAGCTACGAGGCGGTCCCATCGCCGCAG GGCAACGGCACGATCAAGGGCTATTTTGTGCGGCCGGTAAGCGCGGATACGCGCGCCGAGAAGCCGGTGAAGCTGCCGGG CATCATCGTGGTCCACGAAAACCGCGGATTGAATCCGCATATCGAGGATGTGGCGCGCCGTTTTGCGCTGGCCGGTTTCA TGGCATTTGCTCCGGATGGGCTGACGTCGGTAGGCGGCTTCCCCGGCGACGACTATCGCGGCGGTCAGATGTTCAGCAAG ATCGACGGCAAGAAGATGTTCGAGGACATGGTGGCGGCGGCAATGTGGCTGAAAGGCCGCGCGGACTGCACGGGGAAGAT CGGCGTCACCGGCTTCTGTTACGGCGGCAGCGTCTCCAACAACCTGGCCGTACGGCTCGGCGCGGATCTCTCGGCGGCGG CGCCCTTCTACGGCGGGGCTCCGGCGAACAAGGAAGACGTGGCCAAAATCAAGGCGGCCATTCTGGTGCATCACGGCGAG TTGGATACGCGGCTGGCCCAGGCGTGGCCGGCATACGACGCCGCGCTGAAGGAAGCCGGTGTGGCGCACGAGGGCTACAT TTACCCGGGAGCGGTCCACGGCTTCCATTGCGATGCGACGCCGGAGCGGTACAACAAAGCTGCCGCCGACCTGGCCTGGG GACGCACGGTGGACTGGTTCAATAAGTACGTGCGGGCATAA
Upstream 100 bases:
>100_bases GGGGACTCTACCGCGACCTGCAGATGCTGGCGCCGGGGCAGACCTGGCGCGAGAGCTTCTGGATTCGGCCGAGCGGCTTC TAAAGCGACGGTTTGATATC
Downstream 100 bases:
>100_bases GCGATCGCCTCCCTCAGGGTCGCGGCTCCGTTCCGAGCCGCGCGCGTAAAGTAAGGAAGCGGTTGGTAATTCGTACCAGC GGGGGTTCGTCGTCATGGTG
Product: carboxymethylenebutenolidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MHEMEKTSKISSGAIQLYNLFIHGEIDRRAFMEGLQKFAAGSMTVAALAQALMPNYAAGQQVSRTDERIKTSYEAVPSPQ GNGTIKGYFVRPVSADTRAEKPVKLPGIIVVHENRGLNPHIEDVARRFALAGFMAFAPDGLTSVGGFPGDDYRGGQMFSK IDGKKMFEDMVAAAMWLKGRADCTGKIGVTGFCYGGSVSNNLAVRLGADLSAAAPFYGGAPANKEDVAKIKAAILVHHGE LDTRLAQAWPAYDAALKEAGVAHEGYIYPGAVHGFHCDATPERYNKAAADLAWGRTVDWFNKYVRA
Sequences:
>Translated_306_residues MHEMEKTSKISSGAIQLYNLFIHGEIDRRAFMEGLQKFAAGSMTVAALAQALMPNYAAGQQVSRTDERIKTSYEAVPSPQ GNGTIKGYFVRPVSADTRAEKPVKLPGIIVVHENRGLNPHIEDVARRFALAGFMAFAPDGLTSVGGFPGDDYRGGQMFSK IDGKKMFEDMVAAAMWLKGRADCTGKIGVTGFCYGGSVSNNLAVRLGADLSAAAPFYGGAPANKEDVAKIKAAILVHHGE LDTRLAQAWPAYDAALKEAGVAHEGYIYPGAVHGFHCDATPERYNKAAADLAWGRTVDWFNKYVRA >Mature_306_residues MHEMEKTSKISSGAIQLYNLFIHGEIDRRAFMEGLQKFAAGSMTVAALAQALMPNYAAGQQVSRTDERIKTSYEAVPSPQ GNGTIKGYFVRPVSADTRAEKPVKLPGIIVVHENRGLNPHIEDVARRFALAGFMAFAPDGLTSVGGFPGDDYRGGQMFSK IDGKKMFEDMVAAAMWLKGRADCTGKIGVTGFCYGGSVSNNLAVRLGADLSAAAPFYGGAPANKEDVAKIKAAILVHHGE LDTRLAQAWPAYDAALKEAGVAHEGYIYPGAVHGFHCDATPERYNKAAADLAWGRTVDWFNKYVRA
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994982, Length=256, Percent_Identity=30.46875, Blast_Score=99, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002925 [H]
Pfam domain/function: PF01738 DLH [H]
EC number: NA
Molecular weight: Translated: 32964; Mature: 32964
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHEMEKTSKISSGAIQLYNLFIHGEIDRRAFMEGLQKFAAGSMTVAALAQALMPNYAAGQ CCCHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC QVSRTDERIKTSYEAVPSPQGNGTIKGYFVRPVSADTRAEKPVKLPGIIVVHENRGLNPH HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCC IEDVARRFALAGFMAFAPDGLTSVGGFPGDDYRGGQMFSKIDGKKMFEDMVAAAMWLKGR HHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC ADCTGKIGVTGFCYGGSVSNNLAVRLGADLSAAAPFYGGAPANKEDVAKIKAAILVHHGE CCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCC LDTRLAQAWPAYDAALKEAGVAHEGYIYPGAVHGFHCDATPERYNKAAADLAWGRTVDWF HHHHHHHHCCHHHHHHHHCCCCCCCEECCCCCCCEECCCCHHHHHHHHHHHHCCCCHHHH NKYVRA HHHHCC >Mature Secondary Structure MHEMEKTSKISSGAIQLYNLFIHGEIDRRAFMEGLQKFAAGSMTVAALAQALMPNYAAGQ CCCHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC QVSRTDERIKTSYEAVPSPQGNGTIKGYFVRPVSADTRAEKPVKLPGIIVVHENRGLNPH HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCC IEDVARRFALAGFMAFAPDGLTSVGGFPGDDYRGGQMFSKIDGKKMFEDMVAAAMWLKGR HHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC ADCTGKIGVTGFCYGGSVSNNLAVRLGADLSAAAPFYGGAPANKEDVAKIKAAILVHHGE CCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCC LDTRLAQAWPAYDAALKEAGVAHEGYIYPGAVHGFHCDATPERYNKAAADLAWGRTVDWF HHHHHHHHCCHHHHHHHHCCCCCCCEECCCCCCCEECCCCHHHHHHHHHHHHCCCCHHHH NKYVRA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]