Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622133
Identifier: 116622133
GI number: 116622133
Start: 3820538
End: 3821422
Strand: Direct
Name: 116622133
Synonym: Acid_3021
Alternate gene names: NA
Gene position: 3820538-3821422 (Clockwise)
Preceding gene: 116622132
Following gene: 116622135
Centisome position: 38.34
GC content: 57.06
Gene sequence:
>885_bases ATGGTTGAAGCCGTGATGCTCTGGAACGAGCCGAACAATCTTTCACACTGGAATTTCGAAATCGATCGTGACTGGAGTAT TTACGCAAACATGGTCAATTTAGCCGCCGATGCGGTGAAGGCGGAGAATGCCTGTCTCAAGCGCGTACTGGGCGGCATCT CGCCGATTGATGCGGATTTCGTTCGGAATATGCAGCGCCAGTGCGTGCTGGGGCACGTGGATGTCGTGGCTGTCCACGGA TTCCCTTTGGACTGGAATCACTGGACGATCCATGAATGGCCGGACAAGTTGAACGAGATCCATGCGGTCACAGACCTGCC GGTGTGGATTTCTGAAGCGGGAGTTTCCACGTTCGGTGCCGAAGAGGTGCAGCAGTTCGGGCTGAAGCGCGCTGCGGAGC TGTTGATCGGAAGGGCGGAACGCATCCACTGGTATAGCCTGTACGATTTACCCCGGGCGTGGCCCGCTACTACGCGCCAT CGTGAGGCCGAGGGGTCCTCATACTACCGGCACTTCTACATGGGTCTCCTGCGCGAGGACGGCACGCCGAAATTGGCACT GCGCGATTTTTCGAATTACACACCGGAGCTCGGCATTTGTCAGTGGTTTCATTTCGAAGATCATCGTCTCGACGACGCGG TTCGACGGCTTCGCGATCTGGGCGTGCGCTATTTGCGTACCGGCTTGAGTTGGGCGGATAGTTACCGTCCAGGTGCTGAC CGTTGGTTTGACCGTCAGATGAAAGCGCTGGAGCCCTTCGAGACGACGGTGACCTATTGCTTCACTCCCGAGCATTGCGG AGTGTTGCCCAACCACACCAGTCCGCCGAAAGATGTACGCGAGTTCGCCGATTTCTGTGCGGTGATGACGCGAAGATACG CGTGA
Upstream 100 bases:
>100_bases CCAAATCGCGCGTGTGCCGAAGCTATGCTGCGCAGCGCTGGTTTCGAGATCGCCGCACATCCCGAGGACGAAGTGTACAT TTGCAGGAGAGGCGCCCGCA
Downstream 100 bases:
>100_bases GGAGGCATGACAGTCTTTCAGTTACCGTAGGGCGGTGAGGGCGTGAACAATCTGGCTGACGGGACAATGCCAATTGCCGG GCGAGGGTTGGCGAAACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside Diphosphate Epimerase Protein; Beta-Xylosidase; Transglycosidase
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MVEAVMLWNEPNNLSHWNFEIDRDWSIYANMVNLAADAVKAENACLKRVLGGISPIDADFVRNMQRQCVLGHVDVVAVHG FPLDWNHWTIHEWPDKLNEIHAVTDLPVWISEAGVSTFGAEEVQQFGLKRAAELLIGRAERIHWYSLYDLPRAWPATTRH REAEGSSYYRHFYMGLLREDGTPKLALRDFSNYTPELGICQWFHFEDHRLDDAVRRLRDLGVRYLRTGLSWADSYRPGAD RWFDRQMKALEPFETTVTYCFTPEHCGVLPNHTSPPKDVREFADFCAVMTRRYA
Sequences:
>Translated_294_residues MVEAVMLWNEPNNLSHWNFEIDRDWSIYANMVNLAADAVKAENACLKRVLGGISPIDADFVRNMQRQCVLGHVDVVAVHG FPLDWNHWTIHEWPDKLNEIHAVTDLPVWISEAGVSTFGAEEVQQFGLKRAAELLIGRAERIHWYSLYDLPRAWPATTRH REAEGSSYYRHFYMGLLREDGTPKLALRDFSNYTPELGICQWFHFEDHRLDDAVRRLRDLGVRYLRTGLSWADSYRPGAD RWFDRQMKALEPFETTVTYCFTPEHCGVLPNHTSPPKDVREFADFCAVMTRRYA >Mature_294_residues MVEAVMLWNEPNNLSHWNFEIDRDWSIYANMVNLAADAVKAENACLKRVLGGISPIDADFVRNMQRQCVLGHVDVVAVHG FPLDWNHWTIHEWPDKLNEIHAVTDLPVWISEAGVSTFGAEEVQQFGLKRAAELLIGRAERIHWYSLYDLPRAWPATTRH REAEGSSYYRHFYMGLLREDGTPKLALRDFSNYTPELGICQWFHFEDHRLDDAVRRLRDLGVRYLRTGLSWADSYRPGAD RWFDRQMKALEPFETTVTYCFTPEHCGVLPNHTSPPKDVREFADFCAVMTRRYA
Specific function: Unknown
COG id: COG3664
COG function: function code G; Beta-xylosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34201; Mature: 34201
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEAVMLWNEPNNLSHWNFEIDRDWSIYANMVNLAADAVKAENACLKRVLGGISPIDADF CCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VRNMQRQCVLGHVDVVAVHGFPLDWNHWTIHEWPDKLNEIHAVTDLPVWISEAGVSTFGA HHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCH EEVQQFGLKRAAELLIGRAERIHWYSLYDLPRAWPATTRHREAEGSSYYRHFYMGLLRED HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC GTPKLALRDFSNYTPELGICQWFHFEDHRLDDAVRRLRDLGVRYLRTGLSWADSYRPGAD CCCCEEEHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHH RWFDRQMKALEPFETTVTYCFTPEHCGVLPNHTSPPKDVREFADFCAVMTRRYA HHHHHHHHHCCCCHHEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVEAVMLWNEPNNLSHWNFEIDRDWSIYANMVNLAADAVKAENACLKRVLGGISPIDADF CCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH VRNMQRQCVLGHVDVVAVHGFPLDWNHWTIHEWPDKLNEIHAVTDLPVWISEAGVSTFGA HHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCH EEVQQFGLKRAAELLIGRAERIHWYSLYDLPRAWPATTRHREAEGSSYYRHFYMGLLRED HHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC GTPKLALRDFSNYTPELGICQWFHFEDHRLDDAVRRLRDLGVRYLRTGLSWADSYRPGAD CCCCEEEHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHH RWFDRQMKALEPFETTVTYCFTPEHCGVLPNHTSPPKDVREFADFCAVMTRRYA HHHHHHHHHCCCCHHEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA