Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116622077
Identifier: 116622077
GI number: 116622077
Start: 3741130
End: 3741825
Strand: Reverse
Name: 116622077
Synonym: Acid_2964
Alternate gene names: NA
Gene position: 3741825-3741130 (Counterclockwise)
Preceding gene: 116622078
Following gene: 116622076
Centisome position: 37.55
GC content: 60.63
Gene sequence:
>696_bases ATGAAGTTCATTATGGTAGCTGCTTTGGCTGTTGCTCCGCTCCTGGCCGTGGATAAAGAGTCGACGAAGCGATTGGAGGA GTCCGCGGCAGTATTCTCCGAGGTGATGGCGGCCCCGGATAAGGGCATTCCGCAGGAGATGCTGGAGAACGCGCACTGCA TCGTGATTGTGCCGGGACTGAAGACGGCGGCCTTTGTCTTCGGCGGCAAGTACGGCAAGGGCTATCTGTCCTGCCGCAAT AAACACTCATCGGGATGGTCGGCTCCGGCTACGGTGCGTATCGAAGGCGGCAGTGTCGGTTTTCAGATCGGCGGCTCCCA GACGGATCTGATCATGTTGGTCATGAACGAACGCGGCGCGGACAAACTGCTCTCAAGCAAGTTCACGTTAGGCGCTGAAG GTTCGGTCGCCGCGGGCCCGGTCGGGCGCACGGCAACGGCGCAAACGGATGCGCAGATGCACGCGGAAATTCTCTCTTGG TCGCGGTCCCAGGGTCTGTTCGCCGGGCTCGCGCTCGAAGGCGCCACGCTACGTCAGGATAAGGACGACAACGTCAAACT CTACGGCCGCAAACTTCAGAACCGGGAGATCGTCACCTCGGGCATGACGGCGCCCAGGTCGGCGGCGAGACTCCTCAACC TCCTCAACAAGTATTCGCCGCGCGAGCACAAAACTGTCTCGCAGGTCAGCCGTTAG
Upstream 100 bases:
>100_bases AACATTGGAGTTAGCTGCCGCTTCGATTCCCGTGCAGTTGGGCCGGTGAGTGCACTAGTCACGTTGTCGCAGGTTTCCTC CGACAGAAGAGGCAAAAAAC
Downstream 100 bases:
>100_bases GCAACACAGAACAATCGGATCTCACATGAAAAAAACAATCAGCGCATTTCTTCTCACAGTCGGATTTATATCGGCCCAAG CCACACAGGCGCCGAACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKFIMVAALAVAPLLAVDKESTKRLEESAAVFSEVMAAPDKGIPQEMLENAHCIVIVPGLKTAAFVFGGKYGKGYLSCRN KHSSGWSAPATVRIEGGSVGFQIGGSQTDLIMLVMNERGADKLLSSKFTLGAEGSVAAGPVGRTATAQTDAQMHAEILSW SRSQGLFAGLALEGATLRQDKDDNVKLYGRKLQNREIVTSGMTAPRSAARLLNLLNKYSPREHKTVSQVSR
Sequences:
>Translated_231_residues MKFIMVAALAVAPLLAVDKESTKRLEESAAVFSEVMAAPDKGIPQEMLENAHCIVIVPGLKTAAFVFGGKYGKGYLSCRN KHSSGWSAPATVRIEGGSVGFQIGGSQTDLIMLVMNERGADKLLSSKFTLGAEGSVAAGPVGRTATAQTDAQMHAEILSW SRSQGLFAGLALEGATLRQDKDDNVKLYGRKLQNREIVTSGMTAPRSAARLLNLLNKYSPREHKTVSQVSR >Mature_231_residues MKFIMVAALAVAPLLAVDKESTKRLEESAAVFSEVMAAPDKGIPQEMLENAHCIVIVPGLKTAAFVFGGKYGKGYLSCRN KHSSGWSAPATVRIEGGSVGFQIGGSQTDLIMLVMNERGADKLLSSKFTLGAEGSVAAGPVGRTATAQTDAQMHAEILSW SRSQGLFAGLALEGATLRQDKDDNVKLYGRKLQNREIVTSGMTAPRSAARLLNLLNKYSPREHKTVSQVSR
Specific function: Unknown
COG id: COG2930
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI227430338, Length=204, Percent_Identity=29.9019607843137, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI227430336, Length=204, Percent_Identity=29.9019607843137, Blast_Score=86, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6321804, Length=188, Percent_Identity=32.9787234042553, Blast_Score=76, Evalue=5e-15, Organism=Saccharomyces cerevisiae, GI6321137, Length=187, Percent_Identity=32.620320855615, Blast_Score=73, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24666; Mature: 24666
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFIMVAALAVAPLLAVDKESTKRLEESAAVFSEVMAAPDKGIPQEMLENAHCIVIVPGL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCC KTAAFVFGGKYGKGYLSCRNKHSSGWSAPATVRIEGGSVGFQIGGSQTDLIMLVMNERGA CEEEHEECCCCCCCEEEECCCCCCCCCCCEEEEEECCEEEEEECCCCCEEEEEEECCCCH DKLLSSKFTLGAEGSVAAGPVGRTATAQTDAQMHAEILSWSRSQGLFAGLALEGATLRQD HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC KDDNVKLYGRKLQNREIVTSGMTAPRSAARLLNLLNKYSPREHKTVSQVSR CCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure MKFIMVAALAVAPLLAVDKESTKRLEESAAVFSEVMAAPDKGIPQEMLENAHCIVIVPGL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCC KTAAFVFGGKYGKGYLSCRNKHSSGWSAPATVRIEGGSVGFQIGGSQTDLIMLVMNERGA CEEEHEECCCCCCCEEEECCCCCCCCCCCEEEEEECCEEEEEECCCCCEEEEEEECCCCH DKLLSSKFTLGAEGSVAAGPVGRTATAQTDAQMHAEILSWSRSQGLFAGLALEGATLRQD HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCC KDDNVKLYGRKLQNREIVTSGMTAPRSAARLLNLLNKYSPREHKTVSQVSR CCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA