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The map label for this gene is psaB [H]

Identifier: 116622076

GI number: 116622076

Start: 3739287

End: 3741104

Strand: Reverse

Name: psaB [H]

Synonym: Acid_2963

Alternate gene names: 116622076

Gene position: 3741104-3739287 (Counterclockwise)

Preceding gene: 116622077

Following gene: 116622075

Centisome position: 37.54

GC content: 61.55

Gene sequence:

>1818_bases
ATGAAAAAAACAATCAGCGCATTTCTTCTCACAGTCGGATTTATATCGGCCCAAGCCACACAGGCGCCGAACCCTACTCA
ACAATCAACCGGGAATATGGCCGCAGCCGGCTCCGTGCCTATCTATCACGTAACGGTGGTCGCACGGAGCATGAAGGCGA
TCAACTACAACCATCGCAGCGGCTCGACGGAGATCGGTTTCCGTGGGACGGCGCTGATGCCGGCCGCCACGGGCGAGGCC
AAAGTTGAGAGTAAACAGGGCGTCATCAAGATCAACGCCGATATGCAGAAGCTCGAACCGGCCACGAAGTTCGGACCGGA
GTATCTGACTTATGTGATGTGGGCAATTACTCCTGAGGGCCGCGCGACGAATGTCGGCGAGGTGCTGCTGAACGGCGGAA
AGAGCAAGCTGGACGCCACGACGGAACTGCAGTCATTTGGCTTAATCATTACGGCGGAGCCTTACTTCGCGGTGACTCAA
CCGAGCGACGTCGTGGTCATGGAGAACTTCGTGAAGCGTGAGACCACCGGCACGATCGAAGAACTCGACGCGAAGTTTGA
ACTGCTGCAGCGCGGCCAGTACACGCTCAATGTGAATCCCGCCGAGCTGAAAGCGCGCGTCCTGGATCGCAAACTGCCGC
TGGAACTTTACGAAGCGCGCAACGCGGTGCAGATTGCCCGCTGGACCGGCGCGGAGCGTTACGCACCCGACACTTATCAG
AAGGCCGTGAACGGCCTCGCCAATGCTGAAGGTTATCTGAAGGGCAAGTCCGGCAGCAAGCCGATCGGTACGGTGGCACG
CGAGGCCGTACAAATGGCCGAGGACGCCCGCATTATTACGGTGAAGAAGATCGAAGGCGAAATACTAGCCAACGAACGTG
CGGCGGGGGCGGAGCGCGAAGCACGCTCGGAAGACGCTCGCGCCGCAGCGCAGCGGGAGACCAGGCGCGTCGCTGAACAG
GCGAATGCAGCCGAAGCCGCCGCACGCCTGGATTCGCAGCGGATGGCTCGCGAGAACGACGCGCAGGCCGCCGCTGCCGA
GGCAGAAGCGAATCGCGTAAAGCTTGAGAATGAAGCGCGTCTGGCCAGCGCACGCAGCGAGACCGATCGCCTTAAGCGGG
AGAATGACGCGCAAGCGACCGCCGCGCTTGCGGAGACCGATCGCTTGAAGCGCGAGAATGACGCGCAGGCCACAGCGGCG
CAGAATGAGACCGATCGATTGAAGCGGCAGAACGAGGCGCAGGCGCTGGCGGCTCAGAACGAGGCAGACCGCCTGAAGGC
CGAGAATGAGGCACAGCGAGTTGCCGCCAAGGCCGCATCAGATCGCGCCGCAGGCGATAAGGCGCAAGCCGAGGCAGAGA
AAGCGCAGTTACGCGCTCAACTCCTGGTCCAGTTCAACACCGTCCTGCAGACACGCGATACGGCTCGGGGCCTGATCGTC
AACATGTCGGACGTTTTGTTCGACACCGGCAAGTTCACTCTACGCGCTGGCGCACGTGAGAAACTGGCGCGAGTCGCAGG
GATTCTCGCGGGACACCCCGGGCTACAGATGCAGGTCGAAGGCTACACCGACAGCGTCGGCAGCGAAACCTCCAATCAGC
TGCTATCGGAGCGGCGTGCTACGTCGGTCCGCGACTATCTGACGAGCGCCGGAATTCCGCCGGCATCGGTGACGGCGAAA
GGCTTGGGCGAGACCCTGCCGGTAGCGAGTAATGATAACGCCGCCGGGCGTCAACAGAATCGACGCGTCGAGTTGGTCGT
CTCGGGAGACATCATCGGCGGCTTGATGCAGCCCACGGCCATCGTGGCTGGACAGTAA

Upstream 100 bases:

>100_bases
GCGGCGAGACTCCTCAACCTCCTCAACAAGTATTCGCCGCGCGAGCACAAAACTGTCTCGCAGGTCAGCCGTTAGGCAAC
ACAGAACAATCGGATCTCAC

Downstream 100 bases:

>100_bases
GGAGAATGCCATGAATTGGGATCAAATCGAAGGCAAGTGGAAGCAGTTCAGCGGTTCCGCCCAGGAGCAATGGGGCAAGC
TGACCAGCGATGACCTGGCG

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: PsaB [H]

Number of amino acids: Translated: 605; Mature: 605

Protein sequence:

>605_residues
MKKTISAFLLTVGFISAQATQAPNPTQQSTGNMAAAGSVPIYHVTVVARSMKAINYNHRSGSTEIGFRGTALMPAATGEA
KVESKQGVIKINADMQKLEPATKFGPEYLTYVMWAITPEGRATNVGEVLLNGGKSKLDATTELQSFGLIITAEPYFAVTQ
PSDVVVMENFVKRETTGTIEELDAKFELLQRGQYTLNVNPAELKARVLDRKLPLELYEARNAVQIARWTGAERYAPDTYQ
KAVNGLANAEGYLKGKSGSKPIGTVAREAVQMAEDARIITVKKIEGEILANERAAGAEREARSEDARAAAQRETRRVAEQ
ANAAEAAARLDSQRMARENDAQAAAAEAEANRVKLENEARLASARSETDRLKRENDAQATAALAETDRLKRENDAQATAA
QNETDRLKRQNEAQALAAQNEADRLKAENEAQRVAAKAASDRAAGDKAQAEAEKAQLRAQLLVQFNTVLQTRDTARGLIV
NMSDVLFDTGKFTLRAGAREKLARVAGILAGHPGLQMQVEGYTDSVGSETSNQLLSERRATSVRDYLTSAGIPPASVTAK
GLGETLPVASNDNAAGRQQNRRVELVVSGDIIGGLMQPTAIVAGQ

Sequences:

>Translated_605_residues
MKKTISAFLLTVGFISAQATQAPNPTQQSTGNMAAAGSVPIYHVTVVARSMKAINYNHRSGSTEIGFRGTALMPAATGEA
KVESKQGVIKINADMQKLEPATKFGPEYLTYVMWAITPEGRATNVGEVLLNGGKSKLDATTELQSFGLIITAEPYFAVTQ
PSDVVVMENFVKRETTGTIEELDAKFELLQRGQYTLNVNPAELKARVLDRKLPLELYEARNAVQIARWTGAERYAPDTYQ
KAVNGLANAEGYLKGKSGSKPIGTVAREAVQMAEDARIITVKKIEGEILANERAAGAEREARSEDARAAAQRETRRVAEQ
ANAAEAAARLDSQRMARENDAQAAAAEAEANRVKLENEARLASARSETDRLKRENDAQATAALAETDRLKRENDAQATAA
QNETDRLKRQNEAQALAAQNEADRLKAENEAQRVAAKAASDRAAGDKAQAEAEKAQLRAQLLVQFNTVLQTRDTARGLIV
NMSDVLFDTGKFTLRAGAREKLARVAGILAGHPGLQMQVEGYTDSVGSETSNQLLSERRATSVRDYLTSAGIPPASVTAK
GLGETLPVASNDNAAGRQQNRRVELVVSGDIIGGLMQPTAIVAGQ
>Mature_605_residues
MKKTISAFLLTVGFISAQATQAPNPTQQSTGNMAAAGSVPIYHVTVVARSMKAINYNHRSGSTEIGFRGTALMPAATGEA
KVESKQGVIKINADMQKLEPATKFGPEYLTYVMWAITPEGRATNVGEVLLNGGKSKLDATTELQSFGLIITAEPYFAVTQ
PSDVVVMENFVKRETTGTIEELDAKFELLQRGQYTLNVNPAELKARVLDRKLPLELYEARNAVQIARWTGAERYAPDTYQ
KAVNGLANAEGYLKGKSGSKPIGTVAREAVQMAEDARIITVKKIEGEILANERAAGAEREARSEDARAAAQRETRRVAEQ
ANAAEAAARLDSQRMARENDAQAAAAEAEANRVKLENEARLASARSETDRLKRENDAQATAALAETDRLKRENDAQATAA
QNETDRLKRQNEAQALAAQNEADRLKAENEAQRVAAKAASDRAAGDKAQAEAEKAQLRAQLLVQFNTVLQTRDTARGLIV
NMSDVLFDTGKFTLRAGAREKLARVAGILAGHPGLQMQVEGYTDSVGSETSNQLLSERRATSVRDYLTSAGIPPASVTAK
GLGETLPVASNDNAAGRQQNRRVELVVSGDIIGGLMQPTAIVAGQ

Specific function: PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which tran

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=139, Percent_Identity=35.9712230215827, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1787191, Length=131, Percent_Identity=41.9847328244275, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788957, Length=111, Percent_Identity=34.2342342342342, Blast_Score=66, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006665
- InterPro:   IPR001280
- InterPro:   IPR020586
- InterPro:   IPR006244 [H]

Pfam domain/function: PF00691 OmpA; PF00223 PsaA_PsaB [H]

EC number: NA

Molecular weight: Translated: 65061; Mature: 65061

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTISAFLLTVGFISAQATQAPNPTQQSTGNMAAAGSVPIYHVTVVARSMKAINYNHRS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHCCCCCC
GSTEIGFRGTALMPAATGEAKVESKQGVIKINADMQKLEPATKFGPEYLTYVMWAITPEG
CCCCCCCCCCEECCCCCCCCEECCCCCEEEECCCHHHCCCHHHCCHHHHEEEEEEECCCC
RATNVGEVLLNGGKSKLDATTELQSFGLIITAEPYFAVTQPSDVVVMENFVKRETTGTIE
CCCCHHHHHHCCCCCCCCHHHHHHHCCEEEEECCEEEECCCCCCHHHHHHHHHCCCCCHH
ELDAKFELLQRGQYTLNVNPAELKARVLDRKLPLELYEARNAVQIARWTGAERYAPDTYQ
HHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCCHHHH
KAVNGLANAEGYLKGKSGSKPIGTVAREAVQMAEDARIITVKKIEGEILANERAAGAERE
HHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCEEEECCCCCCCHHH
ARSEDARAAAQRETRRVAEQANAAEAAARLDSQRMARENDAQAAAAEAEANRVKLENEAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEECCHHH
LASARSETDRLKRENDAQATAALAETDRLKRENDAQATAAQNETDRLKRQNEAQALAAQN
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHCC
EADRLKAENEAQRVAAKAASDRAAGDKAQAEAEKAQLRAQLLVQFNTVLQTRDTARGLIV
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
NMSDVLFDTGKFTLRAGAREKLARVAGILAGHPGLQMQVEGYTDSVGSETSNQLLSERRA
EHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
TSVRDYLTSAGIPPASVTAKGLGETLPVASNDNAAGRQQNRRVELVVSGDIIGGLMQPTA
HHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHCCCCE
IVAGQ
EECCC
>Mature Secondary Structure
MKKTISAFLLTVGFISAQATQAPNPTQQSTGNMAAAGSVPIYHVTVVARSMKAINYNHRS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEEHHHHHHHHHHHCCCCCC
GSTEIGFRGTALMPAATGEAKVESKQGVIKINADMQKLEPATKFGPEYLTYVMWAITPEG
CCCCCCCCCCEECCCCCCCCEECCCCCEEEECCCHHHCCCHHHCCHHHHEEEEEEECCCC
RATNVGEVLLNGGKSKLDATTELQSFGLIITAEPYFAVTQPSDVVVMENFVKRETTGTIE
CCCCHHHHHHCCCCCCCCHHHHHHHCCEEEEECCEEEECCCCCCHHHHHHHHHCCCCCHH
ELDAKFELLQRGQYTLNVNPAELKARVLDRKLPLELYEARNAVQIARWTGAERYAPDTYQ
HHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCCCHHHH
KAVNGLANAEGYLKGKSGSKPIGTVAREAVQMAEDARIITVKKIEGEILANERAAGAERE
HHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCEEEECCCCCCCHHH
ARSEDARAAAQRETRRVAEQANAAEAAARLDSQRMARENDAQAAAAEAEANRVKLENEAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEECCHHH
LASARSETDRLKRENDAQATAALAETDRLKRENDAQATAAQNETDRLKRQNEAQALAAQN
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHCC
EADRLKAENEAQRVAAKAASDRAAGDKAQAEAEKAQLRAQLLVQFNTVLQTRDTARGLIV
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
NMSDVLFDTGKFTLRAGAREKLARVAGILAGHPGLQMQVEGYTDSVGSETSNQLLSERRA
EHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
TSVRDYLTSAGIPPASVTAKGLGETLPVASNDNAAGRQQNRRVELVVSGDIIGGLMQPTA
HHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHCCCCE
IVAGQ
EECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]