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The map label for this gene is pcaC [H]

Identifier: 116622027

GI number: 116622027

Start: 3692942

End: 3693760

Strand: Direct

Name: pcaC [H]

Synonym: Acid_2912

Alternate gene names: 116622027

Gene position: 3692942-3693760 (Clockwise)

Preceding gene: 116622026

Following gene: 116622028

Centisome position: 37.06

GC content: 65.08

Gene sequence:

>819_bases
ATGAGAATCTTTGCAGCAATTCTGATCTCTGTGGGCCTGGCCGCATCAGGAGCATGGAGCCAGCCATCGACGGAGCAGGG
TGCGATCCAGATCACGCGCAGCGCCTCGCAACCACCCCGGCCGGCTCCGGACGCCAACTTCACCGGCGCCGCGCGGATCG
ACTCGGCGTTCGGTCCAAATGCACCGGCACACATGTCGGGGGCTCGAGTCGTCTTTGACCCCGGCGCCCGGACGGCGTGG
CATACGCACCCGCTGGGTCAACTCCTGATCGTGACCGCCGGGACGGGGCGCGTACAGCGGTGGGGGGACGCCATCGACGA
AATCCGCCAGGGCGACGTCGTTTGGATTCCGCCAGGGCAGAAGCACTGGCACGGCGCCGCGCCGAACAGCTCCATGACGC
ACATCGCGATCTTGGAACAGCTGGACGGCAAGTCCGTTGACTGGATGGAGAAGGTCAGCGATGCGCAGTACGGCGCGCCG
CTTCGCGGCCAATCGGCGGTCGCCAGCGCTCCGCGGCCTCGCCCGTCGCAAGCGGCCATGGGCGACTTCGCTCCGAAATT
GGCGGAGATCACGGACAACGTGCTGTACGGCGATATCTGGGAGCGGCCGCAACTGTCGAAGCGTGACAGAAGCCTGGCGA
CCGTGGCGGCGTTGATTGCGTTAAACCGTCCGGACCAGCTCCGGTCTCACCTCAACATCGCGCGCCAAAACGGTGTGACG
CAGGAGGAGTTAATCGAGACGATCACGCACCTGGCGTTTTACACCGGCTGGCCGAACGCGGTTACCGCCATCGGCGTAGC
GAGGGAGGTTTTCAAATGA

Upstream 100 bases:

>100_bases
TGGGTGAGATCGCACGCGGGGCGGCCGGAATCGAGACACAGGGAGCACGCCTGCCGCAAGCGGCGCTAGACATGGTCGGG
CACTAAGTGTGAGAGAGCGT

Downstream 100 bases:

>100_bases
TCAAGTCTTTCCTCACACTCGGGGCAATCGGCGCCATCCTGGTTGCGGCGGCCAGCGGACAGGGAGTTAAGACGAAGGCC
GAGCCGCTGATGATCCAGGA

Product: carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRIFAAILISVGLAASGAWSQPSTEQGAIQITRSASQPPRPAPDANFTGAARIDSAFGPNAPAHMSGARVVFDPGARTAW
HTHPLGQLLIVTAGTGRVQRWGDAIDEIRQGDVVWIPPGQKHWHGAAPNSSMTHIAILEQLDGKSVDWMEKVSDAQYGAP
LRGQSAVASAPRPRPSQAAMGDFAPKLAEITDNVLYGDIWERPQLSKRDRSLATVAALIALNRPDQLRSHLNIARQNGVT
QEELIETITHLAFYTGWPNAVTAIGVAREVFK

Sequences:

>Translated_272_residues
MRIFAAILISVGLAASGAWSQPSTEQGAIQITRSASQPPRPAPDANFTGAARIDSAFGPNAPAHMSGARVVFDPGARTAW
HTHPLGQLLIVTAGTGRVQRWGDAIDEIRQGDVVWIPPGQKHWHGAAPNSSMTHIAILEQLDGKSVDWMEKVSDAQYGAP
LRGQSAVASAPRPRPSQAAMGDFAPKLAEITDNVLYGDIWERPQLSKRDRSLATVAALIALNRPDQLRSHLNIARQNGVT
QEELIETITHLAFYTGWPNAVTAIGVAREVFK
>Mature_272_residues
MRIFAAILISVGLAASGAWSQPSTEQGAIQITRSASQPPRPAPDANFTGAARIDSAFGPNAPAHMSGARVVFDPGARTAW
HTHPLGQLLIVTAGTGRVQRWGDAIDEIRQGDVVWIPPGQKHWHGAAPNSSMTHIAILEQLDGKSVDWMEKVSDAQYGAP
LRGQSAVASAPRPRPSQAAMGDFAPKLAEITDNVLYGDIWERPQLSKRDRSLATVAALIALNRPDQLRSHLNIARQNGVT
QEELIETITHLAFYTGWPNAVTAIGVAREVFK

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 29280; Mature: 29280

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIFAAILISVGLAASGAWSQPSTEQGAIQITRSASQPPRPAPDANFTGAARIDSAFGPN
CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCC
APAHMSGARVVFDPGARTAWHTHPLGQLLIVTAGTGRVQRWGDAIDEIRQGDVVWIPPGQ
CCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCC
KHWHGAAPNSSMTHIAILEQLDGKSVDWMEKVSDAQYGAPLRGQSAVASAPRPRPSQAAM
CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCHHCCCCCCCCHHHHCCCCCCCCHHHH
GDFAPKLAEITDNVLYGDIWERPQLSKRDRSLATVAALIALNRPDQLRSHLNIARQNGVT
HHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
QEELIETITHLAFYTGWPNAVTAIGVAREVFK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIFAAILISVGLAASGAWSQPSTEQGAIQITRSASQPPRPAPDANFTGAARIDSAFGPN
CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCC
APAHMSGARVVFDPGARTAWHTHPLGQLLIVTAGTGRVQRWGDAIDEIRQGDVVWIPPGQ
CCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCCC
KHWHGAAPNSSMTHIAILEQLDGKSVDWMEKVSDAQYGAPLRGQSAVASAPRPRPSQAAM
CCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCHHCCCCCCCCHHHHCCCCCCCCHHHH
GDFAPKLAEITDNVLYGDIWERPQLSKRDRSLATVAALIALNRPDQLRSHLNIARQNGVT
HHHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
QEELIETITHLAFYTGWPNAVTAIGVAREVFK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]