Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116621998
Identifier: 116621998
GI number: 116621998
Start: 3652743
End: 3655493
Strand: Direct
Name: 116621998
Synonym: Acid_2883
Alternate gene names: NA
Gene position: 3652743-3655493 (Clockwise)
Preceding gene: 116621992
Following gene: 116621999
Centisome position: 36.65
GC content: 61.65
Gene sequence:
>2751_bases GTGCCTGCGAAGAGTACGAATGCGGAGTGTACACGGCTGCGGGATGCACGCTCAGCCGCAACGCCTTGGAAGAAGTGGGG GCCGTACCTGGCCGAGAGGCAATGGGGCACGGTGCGCGAGGATTACAGCGTGGATGGCGACGCCTGGAAGTATTTCACGC ACGACCAGGCGCGGTCGCGCGCGTACCGCTGGGGGGAGGATGGACTGGCGGGGATCAGCGATGACAAGCAGCTCCTGTGC TTTTCGCCCGCGCTTTGGAACGGGCGCGACCCGATTTTGAAGGAGCGTCTTTTCGGGCTCACGAACAGCGAGGGCAATCA CGGAGAAGACGTTAAGGAATACTACTTCTACCTGGACAGCACGCCGACGCATTCGTACATGAAGTATCTGTACAAGTATC CGCAGGCGACTTATCCCTATGTAGACCTGGTGGAGACGAACGCGCGGCGCACCCGCGAGGATTACGAATACGAGCTGCTG GATACGGGAATCTTCGATGACGACCGTTATTTCGACGTGTTTGTTGAGTATGCCAAGAGTACGCCGGAAGACATCCTGGT CCAGATCAGCGCGTGCAATCGCGGGCCAGAGCCGGCTGAGCTTCACGTTCTGCCGACGCTCTGGTTTCGCAACACGTGGA GTTGGGATCCGGGAGTGGTGAGGCCGACGCTGACCGAGATTGCGGGGCGAAAGGGCGTGCGCACGGTGGCGGCTTCGCTC GGCGAACTGGGACGGCGGTTCCTGTACTGCGAGACCGAGGTTCCGCTGCTGTTCACGGAGAACGAGACCAATAACCAGCG GATCTTCGGCACGCCCAATGCGGGCCGGTACGTGAAGGACGGGATCAACGACTACGTGGTTGCGGGCAGGGTGGATGCTG TGAATCGGGAGGGGACGGGAACCAAGGCGTCCGCGCATTACCGGCTGATGGTCGGCGCTGGGAAGACGGTGACGCTATGG CTGCGATTGAGCGACCTGGCACCGGACGCGATGGGCGATCCATTCGGAAGCAAGTTCGCGCAGATCGTGCAATCGCGGAG AGGTGAAGCCGACGACTTTTATCGCTCGATCACGCCGCGGCGGAGCGGGAAGGAAGAGGGGCGCGTGATGCGGCAGGCGC TGGCTGGAATGCTGTGGAGCAAGCAGTATTTCGGACTGGACGTGGAACGGTGGCTGACGGAGCATCACGCGACGCATCTG GCGGTGGGCGCGCGGCCGCCGCGGAACATCGAATGGTTCCACATGGTGAACGAACACGTGATCTCCATGCCGGACAAGTG GGAGTATCCGTGGTACGCGGCGTGGGATCTTGCCTTCCATTCCATGGCGCTCTCCACGGTGGATGTGGATTTCGCGAAGG GACAACTCGACCTGCTGCTACAACATTATTTCCTGCATCCGAGCGGGCAGATTCCGGCGTATGAGTGGAACTTCAGCGAT GTGAATCCACCGGTGCATGCCTGGGCGACGATCTTTCTTTACCGGACGGAGCAAGCGATGCACGGAGCCGGCGACATGGA TTTTCTGCGCCGGAGCTTCCAGAAACTGCTGATGAATTTCACCTGGTGGGTGAACCGCAAGGACCGGTTCGGAAAGAACT TGTTCGAGGGAGGATTTCTGGGTCTCGACAACATCGGCGTGTTCGACCGCAGCGCTCCGCTGCCGGGCGGCGGTCATCTG GAGCAGGCCGACGGAACAGCGTGGATGGCGCTGTTCTGCCAGAACATGTTCGAGATCGCGATGGAGCTATCCACGGTAGA CCCGGGCTGCGAGGACATGGCCACGAAGTTCACGGATCACTTCCTTTGGATTGCAAAGGCCATGAACCAGATGGGGCCGG ACGGGATGTGGGACGAGGAAGACGGCTTCTATTACGACGTGCTGCGCCTGCCGGATGGCACGGCGTCGCGGCTGAAGATC CGGTCGGCGGTGAGTTTGTTGCCGCTGTGCGCGAGCACGGTGATCGAGCCCTGGCAGCGGGACCGGATACCGCACGCGAT GGCGCAGGCGGCAGAGCGGCTGCGCAAGAGGCCGGAACTGATGAACTACATTCATCCCACCGGCCCGGGCCACCGGGGCG TGGGGGAGCGGGGGATCTTCGCGCTGGTGAACCAAGAGAGGCTGCGCCGGATTCTGACGCGCATGCTGGACGAGGACGAG TTTCTGAGCCCCTATGGGATTCGCGCGGTCTCGCGCTTTCACGAGGCGAATCCATACGTGGTGACGGTGGCTGGCCAGGA GTACCGGGTGAAATATCTGCCGGCGGAATCCGATTCCGGGCTGTTCGGCGGTAACTCGAACTGGCGCGGGCCGGTGTGGA TGCCTTTGAACGTGCTGCTGATCCGCGCGCTGATGTCGTACTACCTCTACTACGGGGACAATTTCCAGATTGAGTGTCCG ACGGGTTCGGGAAAGCAGATGAACCTGTTCCAGGTGGCGCGCGAGATTGCGCGGCGTCTGACGAAGATTTTTCTGCAGGA CGAAGGCGGGCGGCGTCCTGTTTTCGGCGGCGCGACGAAGTTTCAGGAGGACCCGCACTGGAAGGATTACCTGCTGTTTT ACGAGTATTTCCACGGCGACAACGGGGCGGGCCTGGGCGCCAGCCACCAAACCGGGTGGACGGGACTGGTGGCCAAGCTG ATTGAGATGTTCGGGCGGCTGGACGGGGATCACTACCTGGCGGCCGGGAAGCGCAGCGCATATGCGCGGTTAGCGGGCAG CGAAGAAGCGAGTGTGATCTTGCGCAAGTGA
Upstream 100 bases:
>100_bases CCGAATGCATAGTTTGGTTGATGAATGTTCGCGGGCTGCAAACCCGGTCCGGAGGGCGCGGTTTTGCATCAGGGCCAATG GGGGACCACGGGAGGGGCAT
Downstream 100 bases:
>100_bases AAAGGATGCAATTTATTGGATCCGGGGAAACGGATCTGCATCCGGAGTGTCGTGGCGCTTTCGCGTTTCTCTCTCAAGGC TCGAAGCGCAGTGCGCCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 916; Mature: 915
Protein sequence:
>916_residues MPAKSTNAECTRLRDARSAATPWKKWGPYLAERQWGTVREDYSVDGDAWKYFTHDQARSRAYRWGEDGLAGISDDKQLLC FSPALWNGRDPILKERLFGLTNSEGNHGEDVKEYYFYLDSTPTHSYMKYLYKYPQATYPYVDLVETNARRTREDYEYELL DTGIFDDDRYFDVFVEYAKSTPEDILVQISACNRGPEPAELHVLPTLWFRNTWSWDPGVVRPTLTEIAGRKGVRTVAASL GELGRRFLYCETEVPLLFTENETNNQRIFGTPNAGRYVKDGINDYVVAGRVDAVNREGTGTKASAHYRLMVGAGKTVTLW LRLSDLAPDAMGDPFGSKFAQIVQSRRGEADDFYRSITPRRSGKEEGRVMRQALAGMLWSKQYFGLDVERWLTEHHATHL AVGARPPRNIEWFHMVNEHVISMPDKWEYPWYAAWDLAFHSMALSTVDVDFAKGQLDLLLQHYFLHPSGQIPAYEWNFSD VNPPVHAWATIFLYRTEQAMHGAGDMDFLRRSFQKLLMNFTWWVNRKDRFGKNLFEGGFLGLDNIGVFDRSAPLPGGGHL EQADGTAWMALFCQNMFEIAMELSTVDPGCEDMATKFTDHFLWIAKAMNQMGPDGMWDEEDGFYYDVLRLPDGTASRLKI RSAVSLLPLCASTVIEPWQRDRIPHAMAQAAERLRKRPELMNYIHPTGPGHRGVGERGIFALVNQERLRRILTRMLDEDE FLSPYGIRAVSRFHEANPYVVTVAGQEYRVKYLPAESDSGLFGGNSNWRGPVWMPLNVLLIRALMSYYLYYGDNFQIECP TGSGKQMNLFQVAREIARRLTKIFLQDEGGRRPVFGGATKFQEDPHWKDYLLFYEYFHGDNGAGLGASHQTGWTGLVAKL IEMFGRLDGDHYLAAGKRSAYARLAGSEEASVILRK
Sequences:
>Translated_916_residues MPAKSTNAECTRLRDARSAATPWKKWGPYLAERQWGTVREDYSVDGDAWKYFTHDQARSRAYRWGEDGLAGISDDKQLLC FSPALWNGRDPILKERLFGLTNSEGNHGEDVKEYYFYLDSTPTHSYMKYLYKYPQATYPYVDLVETNARRTREDYEYELL DTGIFDDDRYFDVFVEYAKSTPEDILVQISACNRGPEPAELHVLPTLWFRNTWSWDPGVVRPTLTEIAGRKGVRTVAASL GELGRRFLYCETEVPLLFTENETNNQRIFGTPNAGRYVKDGINDYVVAGRVDAVNREGTGTKASAHYRLMVGAGKTVTLW LRLSDLAPDAMGDPFGSKFAQIVQSRRGEADDFYRSITPRRSGKEEGRVMRQALAGMLWSKQYFGLDVERWLTEHHATHL AVGARPPRNIEWFHMVNEHVISMPDKWEYPWYAAWDLAFHSMALSTVDVDFAKGQLDLLLQHYFLHPSGQIPAYEWNFSD VNPPVHAWATIFLYRTEQAMHGAGDMDFLRRSFQKLLMNFTWWVNRKDRFGKNLFEGGFLGLDNIGVFDRSAPLPGGGHL EQADGTAWMALFCQNMFEIAMELSTVDPGCEDMATKFTDHFLWIAKAMNQMGPDGMWDEEDGFYYDVLRLPDGTASRLKI RSAVSLLPLCASTVIEPWQRDRIPHAMAQAAERLRKRPELMNYIHPTGPGHRGVGERGIFALVNQERLRRILTRMLDEDE FLSPYGIRAVSRFHEANPYVVTVAGQEYRVKYLPAESDSGLFGGNSNWRGPVWMPLNVLLIRALMSYYLYYGDNFQIECP TGSGKQMNLFQVAREIARRLTKIFLQDEGGRRPVFGGATKFQEDPHWKDYLLFYEYFHGDNGAGLGASHQTGWTGLVAKL IEMFGRLDGDHYLAAGKRSAYARLAGSEEASVILRK >Mature_915_residues PAKSTNAECTRLRDARSAATPWKKWGPYLAERQWGTVREDYSVDGDAWKYFTHDQARSRAYRWGEDGLAGISDDKQLLCF SPALWNGRDPILKERLFGLTNSEGNHGEDVKEYYFYLDSTPTHSYMKYLYKYPQATYPYVDLVETNARRTREDYEYELLD TGIFDDDRYFDVFVEYAKSTPEDILVQISACNRGPEPAELHVLPTLWFRNTWSWDPGVVRPTLTEIAGRKGVRTVAASLG ELGRRFLYCETEVPLLFTENETNNQRIFGTPNAGRYVKDGINDYVVAGRVDAVNREGTGTKASAHYRLMVGAGKTVTLWL RLSDLAPDAMGDPFGSKFAQIVQSRRGEADDFYRSITPRRSGKEEGRVMRQALAGMLWSKQYFGLDVERWLTEHHATHLA VGARPPRNIEWFHMVNEHVISMPDKWEYPWYAAWDLAFHSMALSTVDVDFAKGQLDLLLQHYFLHPSGQIPAYEWNFSDV NPPVHAWATIFLYRTEQAMHGAGDMDFLRRSFQKLLMNFTWWVNRKDRFGKNLFEGGFLGLDNIGVFDRSAPLPGGGHLE QADGTAWMALFCQNMFEIAMELSTVDPGCEDMATKFTDHFLWIAKAMNQMGPDGMWDEEDGFYYDVLRLPDGTASRLKIR SAVSLLPLCASTVIEPWQRDRIPHAMAQAAERLRKRPELMNYIHPTGPGHRGVGERGIFALVNQERLRRILTRMLDEDEF LSPYGIRAVSRFHEANPYVVTVAGQEYRVKYLPAESDSGLFGGNSNWRGPVWMPLNVLLIRALMSYYLYYGDNFQIECPT GSGKQMNLFQVAREIARRLTKIFLQDEGGRRPVFGGATKFQEDPHWKDYLLFYEYFHGDNGAGLGASHQTGWTGLVAKLI EMFGRLDGDHYLAAGKRSAYARLAGSEEASVILRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323852, Length=946, Percent_Identity=45.7716701902748, Blast_Score=818, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104694; Mature: 104563
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKSTNAECTRLRDARSAATPWKKWGPYLAERQWGTVREDYSVDGDAWKYFTHDQARSR CCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHH AYRWGEDGLAGISDDKQLLCFSPALWNGRDPILKERLFGLTNSEGNHGEDVKEYYFYLDS HHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHEEEECC TPTHSYMKYLYKYPQATYPYVDLVETNARRTREDYEYELLDTGIFDDDRYFDVFVEYAKS CCHHHHHHHHHHCCCCCCCEEEEEECCCHHCHHCCCEEEEECCCCCCCHHHHHHHHHHHC TPEDILVQISACNRGPEPAELHVLPTLWFRNTWSWDPGVVRPTLTEIAGRKGVRTVAASL CCHHHEEEEECCCCCCCCCEEEEEEEHEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH GELGRRFLYCETEVPLLFTENETNNQRIFGTPNAGRYVKDGINDYVVAGRVDAVNREGTG HHHCCEEEEEECCCCEEEECCCCCCCEEEECCCCCCHHHCCCCCEEEECEEECCCCCCCC TKASAHYRLMVGAGKTVTLWLRLSDLAPDAMGDPFGSKFAQIVQSRRGEADDFYRSITPR CCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCC RSGKEEGRVMRQALAGMLWSKQYFGLDVERWLTEHHATHLAVGARPPRNIEWFHMVNEHV CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHH ISMPDKWEYPWYAAWDLAFHSMALSTVDVDFAKGQLDLLLQHYFLHPSGQIPAYEWNFSD CCCCCCCCCCCEEHHHHHHHHHHHHHEECHHCCCHHHHHHHHHHCCCCCCCCEEECCCCC VNPPVHAWATIFLYRTEQAMHGAGDMDFLRRSFQKLLMNFTWWVNRKDRFGKNLFEGGFL CCCCHHHEEEEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHEECCHHHHCCHHHCCCCC GLDNIGVFDRSAPLPGGGHLEQADGTAWMALFCQNMFEIAMELSTVDPGCEDMATKFTDH CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FLWIAKAMNQMGPDGMWDEEDGFYYDVLRLPDGTASRLKIRSAVSLLPLCASTVIEPWQR HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHH DRIPHAMAQAAERLRKRPELMNYIHPTGPGHRGVGERGIFALVNQERLRRILTRMLDEDE CCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCC FLSPYGIRAVSRFHEANPYVVTVAGQEYRVKYLPAESDSGLFGGNSNWRGPVWMPLNVLL CCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEECCHHHHH IRALMSYYLYYGDNFQIECPTGSGKQMNLFQVAREIARRLTKIFLQDEGGRRPVFGGATK HHHHHHHHHEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC FQEDPHWKDYLLFYEYFHGDNGAGLGASHQTGWTGLVAKLIEMFGRLDGDHYLAAGKRSA CCCCCCHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCH YARLAGSEEASVILRK HHHHCCCCCCEEEEEC >Mature Secondary Structure PAKSTNAECTRLRDARSAATPWKKWGPYLAERQWGTVREDYSVDGDAWKYFTHDQARSR CCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHCCCCCCCCCCCCCCCCEEEECCHHHHHH AYRWGEDGLAGISDDKQLLCFSPALWNGRDPILKERLFGLTNSEGNHGEDVKEYYFYLDS HHCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHEEEECC TPTHSYMKYLYKYPQATYPYVDLVETNARRTREDYEYELLDTGIFDDDRYFDVFVEYAKS CCHHHHHHHHHHCCCCCCCEEEEEECCCHHCHHCCCEEEEECCCCCCCHHHHHHHHHHHC TPEDILVQISACNRGPEPAELHVLPTLWFRNTWSWDPGVVRPTLTEIAGRKGVRTVAASL CCHHHEEEEECCCCCCCCCEEEEEEEHEECCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH GELGRRFLYCETEVPLLFTENETNNQRIFGTPNAGRYVKDGINDYVVAGRVDAVNREGTG HHHCCEEEEEECCCCEEEECCCCCCCEEEECCCCCCHHHCCCCCEEEECEEECCCCCCCC TKASAHYRLMVGAGKTVTLWLRLSDLAPDAMGDPFGSKFAQIVQSRRGEADDFYRSITPR CCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCC RSGKEEGRVMRQALAGMLWSKQYFGLDVERWLTEHHATHLAVGARPPRNIEWFHMVNEHV CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHH ISMPDKWEYPWYAAWDLAFHSMALSTVDVDFAKGQLDLLLQHYFLHPSGQIPAYEWNFSD CCCCCCCCCCCEEHHHHHHHHHHHHHEECHHCCCHHHHHHHHHHCCCCCCCCEEECCCCC VNPPVHAWATIFLYRTEQAMHGAGDMDFLRRSFQKLLMNFTWWVNRKDRFGKNLFEGGFL CCCCHHHEEEEEEEECHHHHCCCCCHHHHHHHHHHHHHHHHHEECCHHHHCCHHHCCCCC GLDNIGVFDRSAPLPGGGHLEQADGTAWMALFCQNMFEIAMELSTVDPGCEDMATKFTDH CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FLWIAKAMNQMGPDGMWDEEDGFYYDVLRLPDGTASRLKIRSAVSLLPLCASTVIEPWQR HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCHHHH DRIPHAMAQAAERLRKRPELMNYIHPTGPGHRGVGERGIFALVNQERLRRILTRMLDEDE CCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCC FLSPYGIRAVSRFHEANPYVVTVAGQEYRVKYLPAESDSGLFGGNSNWRGPVWMPLNVLL CCCCHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEECCHHHHH IRALMSYYLYYGDNFQIECPTGSGKQMNLFQVAREIARRLTKIFLQDEGGRRPVFGGATK HHHHHHHHHEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC FQEDPHWKDYLLFYEYFHGDNGAGLGASHQTGWTGLVAKLIEMFGRLDGDHYLAAGKRSA CCCCCCHHHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCH YARLAGSEEASVILRK HHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA