Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is luxQ [H]
Identifier: 116621999
GI number: 116621999
Start: 3655752
End: 3657632
Strand: Direct
Name: luxQ [H]
Synonym: Acid_2884
Alternate gene names: 116621999
Gene position: 3655752-3657632 (Clockwise)
Preceding gene: 116621998
Following gene: 116622000
Centisome position: 36.68
GC content: 63.26
Gene sequence:
>1881_bases GTGGTCGCGATCAGCCTTTTGCGGCGCGGGCGACTGCGTGCGGCCGGCCTGATCTACCTGTTAGGCATCTGGGTGATGTC CACCGGTATTATCGTACTGAATCGCGGGATCCATAGCGTAGGACTGGTGTACTATGTCGCGTTGCCGGTGACGGGGGCTT GGTTGTTCGGGTTCCAGGGCGCGCTGCGGATTGCCGCGGGGTGCGTCGGGAGTGCACTAGTGCTGGCACTCCTGGAAATG GCGGGCTTGCCGCTGCCGACATATTTTCCGGAAAGGCCTTTCGGAATCTGGACGATGGTGGCGGCGGCCACGGTGATGAC CACGGTACCGGTGGCGCGGGTGCTTCAGCTGCTGAAGCAGACGCTGACGATGCACCGGGCGGCGCAGAAGGCGCTCAGGG AGTATCAGAGCCGGCTGGAGGAAGTGGTGCAGCGGCGGACGGCGGAACTGGTGGAGGCGCGAGACCAGGCACAGGCCGCC AGCCGCGCGAAAAGCGTATTTCTGGCGAACATGAGCCACGAACTGCGCACACCGCTGAACGCGATTCTGGGATTCTCCAA GCTGGTGCGAGGAGGGCCGGGACTTTCGGAGGTGCAGCGCAAGGATCTGGACATCATCAGCCGGAGCGGCGCGCACCTGC TGGATATGATCGACGAAGTTCTGGACCGGGCCAAGATCGAAACCGGGGGAGTAACGACGAAGAAGACGGCGGTGGATCTT CACCGGGTGGTGCACGAGGTGGTGGAACTGATGCGGCCGCGGGCACAGGCGAAGAACCTGGAGTTCGTGTTCGAGCACCC GGAGACTTACCCATACTGCATACGCTCCGATGCGGGGAAACTGCGGCAGGTATTGTTGAACCTCACCGGCAACGCGATTA AGTTCACGCAACGGGGCAGTGTCACTCTGCGGCTCTGGTTGGAACCTATGGCGGGCGACGCTCCCGGGAGTCAAATGCTT TTAACCCTGGACGTGTCGGACACCGGGATTGGGATTGCGCCGGAAGACCAGGAACGGATCTTCGAACCGTTCGCCCAGGC CGGCAATGGGGGCGCGGCGCGAGGTACAGGGCTGGGCTTGAGCATCAGCAGGGAGTTCGTGCGAGCGATGGGAGGAAGCC TGGCGGTGCAAAGCATCCTGCGCGTGGGTTCGCGGTTCCACGTGGAACTGCCGGTGGAATGCGCCGCGGACGGGGTCAAA GGAGAAGGCGAGGCGCGCGAAGAGGTGATCGGCCTGGAGGCAGGACAGCCTGAATATCGAACGCTATTGGTGGGTGACGA GCAGGACAATATCGTGCTGCTGGAGCGGCTGCTGGAGGACGCGGGCTTCCGGGTGTGCGCAGCGGAGAGCGGCGCCGACG GCATTGAGGTGTTTCAGATCTGGCATCCGCATTTGATCCTGGCTGACTTGCGTCTCTCCGGGATGAGCAGCGTGGAACTG GCACGGTGCGTGCGGCAAATGGAGGGTGGGCAGGAGGTAAAGATCGTGGCGTTGACGGCCTCCCTATCCGAAGCGCAGCC GGGGGTGGACGAGACTCTGCGCAATCCTTGCGAAAGCCGCGAGATCTTCGACTGCATCCAGCGGATGCTGGGAGTGCGGT ACCGGTATGGTACGGCAGGCGCATCGCTTCGGGCTACCGAAGGTGAGGCGGGACTCAACCCGGCGGCGCTCTCGGCGATT TCGCCGGGATTGCGGGATGAACTTGAAAATGCGCTGATCCTGCTGGATGTGAAGCGTGTGACGACGCTTGTACAGGAAGT GGCGGAGCAGGCTCCGGCATTGGGCTCGGCGATGGCGGGACTGGCGGAGCGGCTGGCCTACACGTCTATCCTGCAGGCGA TCGCGGTTCGGAAGTCGAGCGCTCTAGAGGGACAAGCGTGA
Upstream 100 bases:
>100_bases ACTGTGCTGGTTTGTCCTCCAGGTCGCGGTTATCTTGCCCTTTTTTGCGTTCCGGAAGGCGGCATCGGCGGCTACGGCAG TATTTGCGGGGATCGCGTGC
Downstream 100 bases:
>100_bases GCGGGATCAGTACCATTCTGGTGGTGGACGACGACTCGGATTCGCTGCGGTTGTTGACCGATATTTTGACGGCGGAAGGA TATCGGGTACGCCCCGCGGA
Product: integral membrane sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MVAISLLRRGRLRAAGLIYLLGIWVMSTGIIVLNRGIHSVGLVYYVALPVTGAWLFGFQGALRIAAGCVGSALVLALLEM AGLPLPTYFPERPFGIWTMVAAATVMTTVPVARVLQLLKQTLTMHRAAQKALREYQSRLEEVVQRRTAELVEARDQAQAA SRAKSVFLANMSHELRTPLNAILGFSKLVRGGPGLSEVQRKDLDIISRSGAHLLDMIDEVLDRAKIETGGVTTKKTAVDL HRVVHEVVELMRPRAQAKNLEFVFEHPETYPYCIRSDAGKLRQVLLNLTGNAIKFTQRGSVTLRLWLEPMAGDAPGSQML LTLDVSDTGIGIAPEDQERIFEPFAQAGNGGAARGTGLGLSISREFVRAMGGSLAVQSILRVGSRFHVELPVECAADGVK GEGEAREEVIGLEAGQPEYRTLLVGDEQDNIVLLERLLEDAGFRVCAAESGADGIEVFQIWHPHLILADLRLSGMSSVEL ARCVRQMEGGQEVKIVALTASLSEAQPGVDETLRNPCESREIFDCIQRMLGVRYRYGTAGASLRATEGEAGLNPAALSAI SPGLRDELENALILLDVKRVTTLVQEVAEQAPALGSAMAGLAERLAYTSILQAIAVRKSSALEGQA
Sequences:
>Translated_626_residues MVAISLLRRGRLRAAGLIYLLGIWVMSTGIIVLNRGIHSVGLVYYVALPVTGAWLFGFQGALRIAAGCVGSALVLALLEM AGLPLPTYFPERPFGIWTMVAAATVMTTVPVARVLQLLKQTLTMHRAAQKALREYQSRLEEVVQRRTAELVEARDQAQAA SRAKSVFLANMSHELRTPLNAILGFSKLVRGGPGLSEVQRKDLDIISRSGAHLLDMIDEVLDRAKIETGGVTTKKTAVDL HRVVHEVVELMRPRAQAKNLEFVFEHPETYPYCIRSDAGKLRQVLLNLTGNAIKFTQRGSVTLRLWLEPMAGDAPGSQML LTLDVSDTGIGIAPEDQERIFEPFAQAGNGGAARGTGLGLSISREFVRAMGGSLAVQSILRVGSRFHVELPVECAADGVK GEGEAREEVIGLEAGQPEYRTLLVGDEQDNIVLLERLLEDAGFRVCAAESGADGIEVFQIWHPHLILADLRLSGMSSVEL ARCVRQMEGGQEVKIVALTASLSEAQPGVDETLRNPCESREIFDCIQRMLGVRYRYGTAGASLRATEGEAGLNPAALSAI SPGLRDELENALILLDVKRVTTLVQEVAEQAPALGSAMAGLAERLAYTSILQAIAVRKSSALEGQA >Mature_626_residues MVAISLLRRGRLRAAGLIYLLGIWVMSTGIIVLNRGIHSVGLVYYVALPVTGAWLFGFQGALRIAAGCVGSALVLALLEM AGLPLPTYFPERPFGIWTMVAAATVMTTVPVARVLQLLKQTLTMHRAAQKALREYQSRLEEVVQRRTAELVEARDQAQAA SRAKSVFLANMSHELRTPLNAILGFSKLVRGGPGLSEVQRKDLDIISRSGAHLLDMIDEVLDRAKIETGGVTTKKTAVDL HRVVHEVVELMRPRAQAKNLEFVFEHPETYPYCIRSDAGKLRQVLLNLTGNAIKFTQRGSVTLRLWLEPMAGDAPGSQML LTLDVSDTGIGIAPEDQERIFEPFAQAGNGGAARGTGLGLSISREFVRAMGGSLAVQSILRVGSRFHVELPVECAADGVK GEGEAREEVIGLEAGQPEYRTLLVGDEQDNIVLLERLLEDAGFRVCAAESGADGIEVFQIWHPHLILADLRLSGMSSVEL ARCVRQMEGGQEVKIVALTASLSEAQPGVDETLRNPCESREIFDCIQRMLGVRYRYGTAGASLRATEGEAGLNPAALSAI SPGLRDELENALILLDVKRVTTLVQEVAEQAPALGSAMAGLAERLAYTSILQAIAVRKSSALEGQA
Specific function: At low cell density, in absence of AI-2 (autoinducer 2), luxQ has a kinase activity and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is t
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI87081816, Length=417, Percent_Identity=32.3741007194245, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI48994928, Length=382, Percent_Identity=31.9371727748691, Blast_Score=166, Evalue=4e-42, Organism=Escherichia coli, GI1789149, Length=273, Percent_Identity=36.6300366300366, Blast_Score=164, Evalue=2e-41, Organism=Escherichia coli, GI1788713, Length=363, Percent_Identity=32.2314049586777, Blast_Score=161, Evalue=1e-40, Organism=Escherichia coli, GI145693157, Length=258, Percent_Identity=34.1085271317829, Blast_Score=122, Evalue=7e-29, Organism=Escherichia coli, GI1786912, Length=281, Percent_Identity=27.7580071174377, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=29.4605809128631, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1786600, Length=254, Percent_Identity=27.9527559055118, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI87082128, Length=231, Percent_Identity=31.1688311688312, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1788549, Length=229, Percent_Identity=27.0742358078603, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1790861, Length=214, Percent_Identity=28.5046728971963, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1786783, Length=235, Percent_Identity=26.3829787234043, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1788279, Length=235, Percent_Identity=25.1063829787234, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1788393, Length=229, Percent_Identity=24.8908296943231, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1790346, Length=228, Percent_Identity=25.8771929824561, Blast_Score=63, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322044, Length=190, Percent_Identity=33.6842105263158, Blast_Score=74, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 67635; Mature: 67635
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAISLLRRGRLRAAGLIYLLGIWVMSTGIIVLNRGIHSVGLVYYVALPVTGAWLFGFQG CHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHH ALRIAAGCVGSALVLALLEMAGLPLPTYFPERPFGIWTMVAAATVMTTVPVARVLQLLKQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TLTMHRAAQKALREYQSRLEEVVQRRTAELVEARDQAQAASRAKSVFLANMSHELRTPLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AILGFSKLVRGGPGLSEVQRKDLDIISRSGAHLLDMIDEVLDRAKIETGGVTTKKTAVDL HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH HRVVHEVVELMRPRAQAKNLEFVFEHPETYPYCIRSDAGKLRQVLLNLTGNAIKFTQRGS HHHHHHHHHHHCCHHHHCCCEEEEECCCCCCEEECCCHHHHHHHHHHCCCCEEEEEECCC VTLRLWLEPMAGDAPGSQMLLTLDVSDTGIGIAPEDQERIFEPFAQAGNGGAARGTGLGL EEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH SISREFVRAMGGSLAVQSILRVGSRFHVELPVECAADGVKGEGEAREEVIGLEAGQPEYR HHHHHHHHHHCCHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCHHHHHCCCCCCCCCCE TLLVGDEQDNIVLLERLLEDAGFRVCAAESGADGIEVFQIWHPHLILADLRLSGMSSVEL EEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHEECCCHHEEEHHHHCCCCHHHH ARCVRQMEGGQEVKIVALTASLSEAQPGVDETLRNPCESREIFDCIQRMLGVRYRYGTAG HHHHHHHCCCCEEEEEEEEEEHHHCCCCHHHHHCCCCCCHHHHHHHHHHHCCEEEECCCC ASLRATEGEAGLNPAALSAISPGLRDELENALILLDVKRVTTLVQEVAEQAPALGSAMAG CCEEECCCCCCCCHHHHHHCCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHH LAERLAYTSILQAIAVRKSSALEGQA HHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVAISLLRRGRLRAAGLIYLLGIWVMSTGIIVLNRGIHSVGLVYYVALPVTGAWLFGFQG CHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHH ALRIAAGCVGSALVLALLEMAGLPLPTYFPERPFGIWTMVAAATVMTTVPVARVLQLLKQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TLTMHRAAQKALREYQSRLEEVVQRRTAELVEARDQAQAASRAKSVFLANMSHELRTPLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AILGFSKLVRGGPGLSEVQRKDLDIISRSGAHLLDMIDEVLDRAKIETGGVTTKKTAVDL HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH HRVVHEVVELMRPRAQAKNLEFVFEHPETYPYCIRSDAGKLRQVLLNLTGNAIKFTQRGS HHHHHHHHHHHCCHHHHCCCEEEEECCCCCCEEECCCHHHHHHHHHHCCCCEEEEEECCC VTLRLWLEPMAGDAPGSQMLLTLDVSDTGIGIAPEDQERIFEPFAQAGNGGAARGTGLGL EEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH SISREFVRAMGGSLAVQSILRVGSRFHVELPVECAADGVKGEGEAREEVIGLEAGQPEYR HHHHHHHHHHCCHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCHHHHHCCCCCCCCCCE TLLVGDEQDNIVLLERLLEDAGFRVCAAESGADGIEVFQIWHPHLILADLRLSGMSSVEL EEEECCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHEECCCHHEEEHHHHCCCCHHHH ARCVRQMEGGQEVKIVALTASLSEAQPGVDETLRNPCESREIFDCIQRMLGVRYRYGTAG HHHHHHHCCCCEEEEEEEEEEHHHCCCCHHHHHCCCCCCHHHHHHHHHHHCCEEEECCCC ASLRATEGEAGLNPAALSAISPGLRDELENALILLDVKRVTTLVQEVAEQAPALGSAMAG CCEEECCCCCCCCHHHHHHCCCCHHHHHCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHH LAERLAYTSILQAIAVRKSSALEGQA HHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301; 12176318 [H]