Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116621933
Identifier: 116621933
GI number: 116621933
Start: 3572723
End: 3573229
Strand: Reverse
Name: 116621933
Synonym: Acid_2818
Alternate gene names: NA
Gene position: 3573229-3572723 (Counterclockwise)
Preceding gene: 116621934
Following gene: 116621932
Centisome position: 35.86
GC content: 60.55
Gene sequence:
>507_bases ATGCCGAAACTAGCGCTGCTTTTGCTGTTGACGACCTCTTTATGGAGCCAGCAGGCCGACCGCTGGAAGGACCTGCGCTT TCTGATTGGGGAATGGACGGGCGAAGGCGGCGGGGCTGGGCAGGGCATGGGAGCATACTCTTTCCTGCCCGAGCTCGGTG GCAAGATTTTGGTTCGCCGCAATACGGCCGATTATCCGGCCGCCAACGGCAATCCGGCGACCCATCACGAGGATGTCATG ACGGTCTACCTGGAGGCCGAGGGCAAAGCTCCCGAGGCGATCTATTTCGATAGCGAGGGCCATGTGATCCATTACGCCGT GGAAATGGACCCTGCCGGCAAGTCAGTCCGCTTCGTCAGCCCAGCTGTTCCCGGCCGGCCGCGCTATCGCCTGACTTATC GCGATACCAACAAGGGTATGGTCGAGGGCCAGTTCGAAATCGCTCCCCCGGGCAAACCGGAGGCATTCAGCCGGTATCTT GAATGGTCGGCGCGCCGAAAGAAGTAA
Upstream 100 bases:
>100_bases CTGCTGCTGGCGTCCGTGCTCGGTTGGGAGGCCCACCACCACTGCCCGGCGGCCGCGCGCCTGGTCGACGTGTTCCGCTG CGGGACCCTATAATCGGTCC
Downstream 100 bases:
>100_bases TTTCGGTACCATTAACCTTCGTACTTATCTAGTACCTGCCCGGTACTACGTCGCCTTTTTCTTCATGGAGGTGTAGTGCA AACTAAGCTTGATGATGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MPKLALLLLLTTSLWSQQADRWKDLRFLIGEWTGEGGGAGQGMGAYSFLPELGGKILVRRNTADYPAANGNPATHHEDVM TVYLEAEGKAPEAIYFDSEGHVIHYAVEMDPAGKSVRFVSPAVPGRPRYRLTYRDTNKGMVEGQFEIAPPGKPEAFSRYL EWSARRKK
Sequences:
>Translated_168_residues MPKLALLLLLTTSLWSQQADRWKDLRFLIGEWTGEGGGAGQGMGAYSFLPELGGKILVRRNTADYPAANGNPATHHEDVM TVYLEAEGKAPEAIYFDSEGHVIHYAVEMDPAGKSVRFVSPAVPGRPRYRLTYRDTNKGMVEGQFEIAPPGKPEAFSRYL EWSARRKK >Mature_167_residues PKLALLLLLTTSLWSQQADRWKDLRFLIGEWTGEGGGAGQGMGAYSFLPELGGKILVRRNTADYPAANGNPATHHEDVMT VYLEAEGKAPEAIYFDSEGHVIHYAVEMDPAGKSVRFVSPAVPGRPRYRLTYRDTNKGMVEGQFEIAPPGKPEAFSRYLE WSARRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18698; Mature: 18567
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKLALLLLLTTSLWSQQADRWKDLRFLIGEWTGEGGGAGQGMGAYSFLPELGGKILVRR CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEE NTADYPAANGNPATHHEDVMTVYLEAEGKAPEAIYFDSEGHVIHYAVEMDPAGKSVRFVS CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEEEEECCCCCEEEEEC PAVPGRPRYRLTYRDTNKGMVEGQFEIAPPGKPEAFSRYLEWSARRKK CCCCCCCCEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure PKLALLLLLTTSLWSQQADRWKDLRFLIGEWTGEGGGAGQGMGAYSFLPELGGKILVRR CHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEE NTADYPAANGNPATHHEDVMTVYLEAEGKAPEAIYFDSEGHVIHYAVEMDPAGKSVRFVS CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEEEEECCCCCEEEEEC PAVPGRPRYRLTYRDTNKGMVEGQFEIAPPGKPEAFSRYLEWSARRKK CCCCCCCCEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA