Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116621932
Identifier: 116621932
GI number: 116621932
Start: 3572104
End: 3572631
Strand: Reverse
Name: 116621932
Synonym: Acid_2817
Alternate gene names: NA
Gene position: 3572631-3572104 (Counterclockwise)
Preceding gene: 116621933
Following gene: 116621931
Centisome position: 35.85
GC content: 56.63
Gene sequence:
>528_bases ATGATGTTGATCGGTGTAGCAGTACTATTGATCCTGGTCCTAGGACTTTCGGTTCTACTAGCCCGCCGCATCGGGTCAGG ATCCGAGATTCTTCCGGTGACCACGGAATGGCTCGGCGACCTTTCCGACGACCGTTACCGTCCGATGCTCCGCCTGTTGG ACGATGCCGATATCCGGTTCCTTCGCGCGCAGAAGAACTTCACTCCTGTCATGGAAAGGAAGCTGCGCACCCAACGAGTA GAGGCCTTCCGGGCCTACCTGCACATGCTGGAATCCGATTTCAAACTGGTTTGCCTGGCATTGAAGGTGATGATGGTTCA ATCCGACTGCGACCGTCCCGACTTGGCCTCCGCGTTGGTTCACCGACAACTTACCTTTGCCTGTATTCTATTGCACGTGC AATTCCGGCTGGTTCTGTTCCGCTGGGGAGTCTCGGGAGTCGATGCCTCCGAGCTGATCCGCATGTTCGATGGCGTGCGC TTGGAATTGAAGATGTTGGTCCCGAGCGCTTCGCCGTTAGCCGCGTAG
Upstream 100 bases:
>100_bases AAGAAGTAATTTCGGTACCATTAACCTTCGTACTTATCTAGTACCTGCCCGGTACTACGTCGCCTTTTTCTTCATGGAGG TGTAGTGCAAACTAAGCTTG
Downstream 100 bases:
>100_bases TTCATATTCATTCCTGAGCGCGACCAGCGGGCCCGACCGTCCGCAGCGGGACAGGCTGCCGCCCTGCCAGTTGGTAGAAT GCGTTTTGCCGTCCCTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MMLIGVAVLLILVLGLSVLLARRIGSGSEILPVTTEWLGDLSDDRYRPMLRLLDDADIRFLRAQKNFTPVMERKLRTQRV EAFRAYLHMLESDFKLVCLALKVMMVQSDCDRPDLASALVHRQLTFACILLHVQFRLVLFRWGVSGVDASELIRMFDGVR LELKMLVPSASPLAA
Sequences:
>Translated_175_residues MMLIGVAVLLILVLGLSVLLARRIGSGSEILPVTTEWLGDLSDDRYRPMLRLLDDADIRFLRAQKNFTPVMERKLRTQRV EAFRAYLHMLESDFKLVCLALKVMMVQSDCDRPDLASALVHRQLTFACILLHVQFRLVLFRWGVSGVDASELIRMFDGVR LELKMLVPSASPLAA >Mature_175_residues MMLIGVAVLLILVLGLSVLLARRIGSGSEILPVTTEWLGDLSDDRYRPMLRLLDDADIRFLRAQKNFTPVMERKLRTQRV EAFRAYLHMLESDFKLVCLALKVMMVQSDCDRPDLASALVHRQLTFACILLHVQFRLVLFRWGVSGVDASELIRMFDGVR LELKMLVPSASPLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19841; Mature: 19841
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLIGVAVLLILVLGLSVLLARRIGSGSEILPVTTEWLGDLSDDRYRPMLRLLDDADIRF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHCCCCCCHHHHHHHHHCCCHHHH LRAQKNFTPVMERKLRTQRVEAFRAYLHMLESDFKLVCLALKVMMVQSDCDRPDLASALV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH HRQLTFACILLHVQFRLVLFRWGVSGVDASELIRMFDGVRLELKMLVPSASPLAA HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MMLIGVAVLLILVLGLSVLLARRIGSGSEILPVTTEWLGDLSDDRYRPMLRLLDDADIRF CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHCCCCCCHHHHHHHHHCCCHHHH LRAQKNFTPVMERKLRTQRVEAFRAYLHMLESDFKLVCLALKVMMVQSDCDRPDLASALV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH HRQLTFACILLHVQFRLVLFRWGVSGVDASELIRMFDGVRLELKMLVPSASPLAA HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA