Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116621919
Identifier: 116621919
GI number: 116621919
Start: 3553594
End: 3554697
Strand: Reverse
Name: 116621919
Synonym: Acid_2804
Alternate gene names: NA
Gene position: 3554697-3553594 (Counterclockwise)
Preceding gene: 116621920
Following gene: 116621918
Centisome position: 35.67
GC content: 63.32
Gene sequence:
>1104_bases ATGGCGGCGCCATCGGTCGAAAAACTGCCGCTGCGGCTGGTCTCGTTGGATGCCTTCCGCGGCGCGACCATCGCCCTCAT GGTGCTCGTCAACAATGCCGGCAGCGGGCTTGATTCCTACCGTCAACTGGAACATTCCCCTTGGCACGGCTGGACTATCA CCGACACGGTCTTCCCTTCCTTTCTCTGGATCGTCGGCGTCGCCATCACGCTCTCACTCGGCAAGCGCGTAGCGGAGGGC GTTCCGAGATCGCACCTTCTGCCGCAGATCTTGCGCCGCGCCGCCATCCTCTTCGTCTTCGGACTCTTCGTGTACGCCTT CCCCCATTTCGATCTCGGAACGCAGCGCATCCTTGGTGTGCTGCAGCGCATCGCCATCTGTTATCTCGCAGCCTCCGTAA TCTTCCTGTACAGCGGCGTACGCGGCCAGATCCTCTGGATCCTCGGCCTCCTCGCCGCGTATTGGATGATGATGACCCTC ATCCCGGTCCCCGGCTATGGCCCCGGCCGCCTCGACGTGGAGGGCAACTTCGCTCACTACATCGACCATCTCGCGCTCGG CCGCCACAACTATCACTCCACCAGGACCTGGGATCCCGAGGGCCTGGTCAGTACCTTGCCCGCCATCGCTACGGCCCTGT TCGGCGTCCTCGCCGGACACATCCTGCGCTGCAGACGCACGCTCGCCGAACGCACCTCGTGGATGTTCACCGCGGGCAGT CTCCTGCTCGCCGCCGGCCTCATTTGTACCGCCTGGCTGCCCATCAACAAAAAACTCTGGACCGATTCCTTCTGCCTCTT TATGGCCGGCCTGGACTTCACCGTCTTCGCGTTCTTCGCCTGGCTGATCGATGGGCAGGGCTGGCGGCGCCCAGTCAAAC CGCTGGTCGTCCTCGGCATGAACTCCATCGCCATCTACATGGTGTCCGAAGGCGTGGCCGAATTCCTGGATGCCGCCGGA CTCCAGAAGCCCATTTATCAGAGGGTCTTCGTCCCCCTGGCCTCGCCGGCGAACGCCTCCCTCCTGTATTCCCTCGCCTT CGTGGCTGCGATGTACCTGGTCGCGTGGTTCCTCCACCGGCGCCGTTGGTTCCTCCGCGTCTGA
Upstream 100 bases:
>100_bases GCATGGGCTTTGAGCGCATGCTCATGTACCTCACCGGCATGAAAAACATCCGCGACGTAATTCCCTTCCCGCGCACTCCG GGGAACGCCGAGTTCTAGTC
Downstream 100 bases:
>100_bases CGATTCGCGAAAGTCTTTTTTTGCGTCCTGTGGTCGCAATTCGCATCAGCCTCGCCAGTGCCCTTTCCAGGAAAGTCGGC GGAAACAGGTGTAAACCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MAAPSVEKLPLRLVSLDAFRGATIALMVLVNNAGSGLDSYRQLEHSPWHGWTITDTVFPSFLWIVGVAITLSLGKRVAEG VPRSHLLPQILRRAAILFVFGLFVYAFPHFDLGTQRILGVLQRIAICYLAASVIFLYSGVRGQILWILGLLAAYWMMMTL IPVPGYGPGRLDVEGNFAHYIDHLALGRHNYHSTRTWDPEGLVSTLPAIATALFGVLAGHILRCRRTLAERTSWMFTAGS LLLAAGLICTAWLPINKKLWTDSFCLFMAGLDFTVFAFFAWLIDGQGWRRPVKPLVVLGMNSIAIYMVSEGVAEFLDAAG LQKPIYQRVFVPLASPANASLLYSLAFVAAMYLVAWFLHRRRWFLRV
Sequences:
>Translated_367_residues MAAPSVEKLPLRLVSLDAFRGATIALMVLVNNAGSGLDSYRQLEHSPWHGWTITDTVFPSFLWIVGVAITLSLGKRVAEG VPRSHLLPQILRRAAILFVFGLFVYAFPHFDLGTQRILGVLQRIAICYLAASVIFLYSGVRGQILWILGLLAAYWMMMTL IPVPGYGPGRLDVEGNFAHYIDHLALGRHNYHSTRTWDPEGLVSTLPAIATALFGVLAGHILRCRRTLAERTSWMFTAGS LLLAAGLICTAWLPINKKLWTDSFCLFMAGLDFTVFAFFAWLIDGQGWRRPVKPLVVLGMNSIAIYMVSEGVAEFLDAAG LQKPIYQRVFVPLASPANASLLYSLAFVAAMYLVAWFLHRRRWFLRV >Mature_366_residues AAPSVEKLPLRLVSLDAFRGATIALMVLVNNAGSGLDSYRQLEHSPWHGWTITDTVFPSFLWIVGVAITLSLGKRVAEGV PRSHLLPQILRRAAILFVFGLFVYAFPHFDLGTQRILGVLQRIAICYLAASVIFLYSGVRGQILWILGLLAAYWMMMTLI PVPGYGPGRLDVEGNFAHYIDHLALGRHNYHSTRTWDPEGLVSTLPAIATALFGVLAGHILRCRRTLAERTSWMFTAGSL LLAAGLICTAWLPINKKLWTDSFCLFMAGLDFTVFAFFAWLIDGQGWRRPVKPLVVLGMNSIAIYMVSEGVAEFLDAAGL QKPIYQRVFVPLASPANASLLYSLAFVAAMYLVAWFLHRRRWFLRV
Specific function: Unknown
COG id: COG4299
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI150378452, Length=415, Percent_Identity=28.9156626506024, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI24639786, Length=345, Percent_Identity=31.304347826087, Blast_Score=129, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40884; Mature: 40753
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPSVEKLPLRLVSLDAFRGATIALMVLVNNAGSGLDSYRQLEHSPWHGWTITDTVFPS CCCCCCHHCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCEEHHHHHHH FLWIVGVAITLSLGKRVAEGVPRSHLLPQILRRAAILFVFGLFVYAFPHFDLGTQRILGV HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LQRIAICYLAASVIFLYSGVRGQILWILGLLAAYWMMMTLIPVPGYGPGRLDVEGNFAHY HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHH IDHLALGRHNYHSTRTWDPEGLVSTLPAIATALFGVLAGHILRCRRTLAERTSWMFTAGS HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLAAGLICTAWLPINKKLWTDSFCLFMAGLDFTVFAFFAWLIDGQGWRRPVKPLVVLGM HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECC NSIAIYMVSEGVAEFLDAAGLQKPIYQRVFVPLASPANASLLYSLAFVAAMYLVAWFLHR CCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RRWFLRV HHHHHCC >Mature Secondary Structure AAPSVEKLPLRLVSLDAFRGATIALMVLVNNAGSGLDSYRQLEHSPWHGWTITDTVFPS CCCCCHHCCHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCEEHHHHHHH FLWIVGVAITLSLGKRVAEGVPRSHLLPQILRRAAILFVFGLFVYAFPHFDLGTQRILGV HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LQRIAICYLAASVIFLYSGVRGQILWILGLLAAYWMMMTLIPVPGYGPGRLDVEGNFAHY HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHH IDHLALGRHNYHSTRTWDPEGLVSTLPAIATALFGVLAGHILRCRRTLAERTSWMFTAGS HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLAAGLICTAWLPINKKLWTDSFCLFMAGLDFTVFAFFAWLIDGQGWRRPVKPLVVLGM HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEECC NSIAIYMVSEGVAEFLDAAGLQKPIYQRVFVPLASPANASLLYSLAFVAAMYLVAWFLHR CCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH RRWFLRV HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA