Definition | Candidatus Solibacter usitatus Ellin6076 chromosome, complete genome. |
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Accession | NC_008536 |
Length | 9,965,640 |
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The map label for this gene is 116621912
Identifier: 116621912
GI number: 116621912
Start: 3544715
End: 3546118
Strand: Reverse
Name: 116621912
Synonym: Acid_2797
Alternate gene names: NA
Gene position: 3546118-3544715 (Counterclockwise)
Preceding gene: 116621913
Following gene: 116621911
Centisome position: 35.58
GC content: 64.53
Gene sequence:
>1404_bases GTGCCATTGCGCCAATGCTGTTGGCTCGCAGCGATCCTCGCCGTCACCGCGTCCGGCCAGTCCCTTCAGGATCGCGCCTT GCAGACCTCGGCGTACTCTTGGCTCCGCGAGTTGAGCGATTCCATCGGCCCGCGACTCACCGGCAGCCCCGCAGCCGCCC GCGCCTCCGCCTGGGCGATCACGCGAATGAAAGAAATCGGCCTCGAAAATGTGCACGTTGAACCGTGGACACTCCGTAGT GGTTGGGAGCGCGGGCATACCGATGCCGAACTCACCAGCCCCGCCCACCTCACTTTGAACGTCGCGTCTTACGGCTGGAC TGGATCCACCCCCGACGCCGGAATCGACGCCGCCTTGGTAGAAGTTCACCGCGGCAACCTTGCCGATGAGATGCGCCACG CCCCGGAGTGGACCGGCAAGGTGGTCTTCGTTTCCACCCGCGGACCCAAACCGGCGGATGGCCTCGCAGTCTACGCGCAA TTGCCAGCGCTCCTCGCCGCGGCGGAACAAGCCCGCGCGGCCGCCGTCATCCTCCGCGACCAGCGCCCCGGATTCATGTT GACCCACACGGGACCGGTCAATTTCAGCGCCGGCGATACCCCGTACAACATTGCAGTCCTCGATATCGCGGACGAACATC AAATGCTCATCGAACGTCTGCTCGAGAAATCGGCGCCCATCCGCCTCCACCTGAATGTGCGCAACCGCTTCCTCCCCGGA ACGGTCGAATCCGTAAATATCTCCGCCGAGATCCGCGGCACCGAGCATCCCGAACAGGTCGTGCTCCTTGGCGCGCATCT CGATTCCTGGGACCTCGGCGCCGCTGAGGCGATCCAACTCTCCGGCAGAAAACCCCGCCGCACCATCCGCGTCGTGCTCT TCACCGGCGAGGAGCAGGGGTTACTCGGCTCGCGCGCGTGGGTGAAACAGCATGCGGCCGAGATTCCGAACCTGGTCTGC GCCCTCGTCCTCGATTGGGGCCAAGGCCCGATCGCAGCCCTCCCGTTAGCTGGCCATGACGAGTTAAAGAAGGACCTTGC GCCGCTCGCGGACCTCCTCAATGGGATCCAGAAATTCCGCCTCGCCGACGACTTCCTGACCTTCACCGACGCCTATGCCT TCACCTTGGCAGGCGTCCCAGGCCTCGCTTTCTATCAGGATTCGCGCGATTACACTCTGGTCGGCCATTCCGCGGCGGAT ACCTACGACAGGGTGGACGGGCAGACCCTCGCGCGCAATACCGCCACACTCGCCGTGGCCGGTTTCTGGATCGCCGATAG CCCCTCGCGGATTGGCGCGCCATGGCCGTCCGCCGAAATCCCGAGGCATCTCAGCGAGCTCAAGCAGCGTCAAATGCTCG AGATATTCGGTCTGTGGCCGGCCCCTTCCACCCTCCCACGGTAG
Upstream 100 bases:
>100_bases TCTGGTCCCCGCAAGGCCTCATCGACATGCACGTCCCCGCCCACTGGGCCTACCTCCACTTCGTCCGCTGACACCGCGCC TCCGCGGGTATGATGGTCAG
Downstream 100 bases:
>100_bases AATGAAGATGTCCCGATGCTTCGTTCCACCCTAGTTCTACTCTGTACCGCCTGTCTGCTCTCGGCACAGGATGATTTCGA AAAACAGATGCGCTCCGTGA
Product: peptidase M28
Products: NA
Alternate protein names: Peptidase; Aminopeptidase; M28 Family Peptidase; M28D Family Peptidase; Peptidase Family
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MPLRQCCWLAAILAVTASGQSLQDRALQTSAYSWLRELSDSIGPRLTGSPAAARASAWAITRMKEIGLENVHVEPWTLRS GWERGHTDAELTSPAHLTLNVASYGWTGSTPDAGIDAALVEVHRGNLADEMRHAPEWTGKVVFVSTRGPKPADGLAVYAQ LPALLAAAEQARAAAVILRDQRPGFMLTHTGPVNFSAGDTPYNIAVLDIADEHQMLIERLLEKSAPIRLHLNVRNRFLPG TVESVNISAEIRGTEHPEQVVLLGAHLDSWDLGAAEAIQLSGRKPRRTIRVVLFTGEEQGLLGSRAWVKQHAAEIPNLVC ALVLDWGQGPIAALPLAGHDELKKDLAPLADLLNGIQKFRLADDFLTFTDAYAFTLAGVPGLAFYQDSRDYTLVGHSAAD TYDRVDGQTLARNTATLAVAGFWIADSPSRIGAPWPSAEIPRHLSELKQRQMLEIFGLWPAPSTLPR
Sequences:
>Translated_467_residues MPLRQCCWLAAILAVTASGQSLQDRALQTSAYSWLRELSDSIGPRLTGSPAAARASAWAITRMKEIGLENVHVEPWTLRS GWERGHTDAELTSPAHLTLNVASYGWTGSTPDAGIDAALVEVHRGNLADEMRHAPEWTGKVVFVSTRGPKPADGLAVYAQ LPALLAAAEQARAAAVILRDQRPGFMLTHTGPVNFSAGDTPYNIAVLDIADEHQMLIERLLEKSAPIRLHLNVRNRFLPG TVESVNISAEIRGTEHPEQVVLLGAHLDSWDLGAAEAIQLSGRKPRRTIRVVLFTGEEQGLLGSRAWVKQHAAEIPNLVC ALVLDWGQGPIAALPLAGHDELKKDLAPLADLLNGIQKFRLADDFLTFTDAYAFTLAGVPGLAFYQDSRDYTLVGHSAAD TYDRVDGQTLARNTATLAVAGFWIADSPSRIGAPWPSAEIPRHLSELKQRQMLEIFGLWPAPSTLPR >Mature_466_residues PLRQCCWLAAILAVTASGQSLQDRALQTSAYSWLRELSDSIGPRLTGSPAAARASAWAITRMKEIGLENVHVEPWTLRSG WERGHTDAELTSPAHLTLNVASYGWTGSTPDAGIDAALVEVHRGNLADEMRHAPEWTGKVVFVSTRGPKPADGLAVYAQL PALLAAAEQARAAAVILRDQRPGFMLTHTGPVNFSAGDTPYNIAVLDIADEHQMLIERLLEKSAPIRLHLNVRNRFLPGT VESVNISAEIRGTEHPEQVVLLGAHLDSWDLGAAEAIQLSGRKPRRTIRVVLFTGEEQGLLGSRAWVKQHAAEIPNLVCA LVLDWGQGPIAALPLAGHDELKKDLAPLADLLNGIQKFRLADDFLTFTDAYAFTLAGVPGLAFYQDSRDYTLVGHSAADT YDRVDGQTLARNTATLAVAGFWIADSPSRIGAPWPSAEIPRHLSELKQRQMLEIFGLWPAPSTLPR
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI7706387, Length=398, Percent_Identity=29.6482412060301, Blast_Score=137, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50749; Mature: 50618
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRQCCWLAAILAVTASGQSLQDRALQTSAYSWLRELSDSIGPRLTGSPAAARASAWAI CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH TRMKEIGLENVHVEPWTLRSGWERGHTDAELTSPAHLTLNVASYGWTGSTPDAGIDAALV HHHHHCCCCCEECCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHH EVHRGNLADEMRHAPEWTGKVVFVSTRGPKPADGLAVYAQLPALLAAAEQARAAAVILRD EECCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHEEEEEEEC QRPGFMLTHTGPVNFSAGDTPYNIAVLDIADEHQMLIERLLEKSAPIRLHLNVRNRFLPG CCCCEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCC TVESVNISAEIRGTEHPEQVVLLGAHLDSWDLGAAEAIQLSGRKPRRTIRVVLFTGEEQG CCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHEEECCCCCCEEEEEEEEECCCCC LLGSRAWVKQHAAEIPNLVCALVLDWGQGPIAALPLAGHDELKKDLAPLADLLNGIQKFR CCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH LADDFLTFTDAYAFTLAGVPGLAFYQDSRDYTLVGHSAADTYDRVDGQTLARNTATLAVA HHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCHHHHCCCCHHHCCCEEEEEE GFWIADSPSRIGAPWPSAEIPRHLSELKQRQMLEIFGLWPAPSTLPR EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PLRQCCWLAAILAVTASGQSLQDRALQTSAYSWLRELSDSIGPRLTGSPAAARASAWAI CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH TRMKEIGLENVHVEPWTLRSGWERGHTDAELTSPAHLTLNVASYGWTGSTPDAGIDAALV HHHHHCCCCCEECCCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHH EVHRGNLADEMRHAPEWTGKVVFVSTRGPKPADGLAVYAQLPALLAAAEQARAAAVILRD EECCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHEEEEEEEC QRPGFMLTHTGPVNFSAGDTPYNIAVLDIADEHQMLIERLLEKSAPIRLHLNVRNRFLPG CCCCEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCCCC TVESVNISAEIRGTEHPEQVVLLGAHLDSWDLGAAEAIQLSGRKPRRTIRVVLFTGEEQG CCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHEEECCCCCCEEEEEEEEECCCCC LLGSRAWVKQHAAEIPNLVCALVLDWGQGPIAALPLAGHDELKKDLAPLADLLNGIQKFR CCCHHHHHHHHHHHHHHHEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH LADDFLTFTDAYAFTLAGVPGLAFYQDSRDYTLVGHSAADTYDRVDGQTLARNTATLAVA HHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEECCCCCHHHHCCCCHHHCCCEEEEEE GFWIADSPSRIGAPWPSAEIPRHLSELKQRQMLEIFGLWPAPSTLPR EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA