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The map label for this gene is ctpA [H]

Identifier: 116621911

GI number: 116621911

Start: 3543242

End: 3544699

Strand: Reverse

Name: ctpA [H]

Synonym: Acid_2796

Alternate gene names: 116621911

Gene position: 3544699-3543242 (Counterclockwise)

Preceding gene: 116621912

Following gene: 116621906

Centisome position: 35.57

GC content: 62.89

Gene sequence:

>1458_bases
ATGCTTCGTTCCACCCTAGTTCTACTCTGTACCGCCTGTCTGCTCTCGGCACAGGATGATTTCGAAAAACAGATGCGCTC
CGTGATCGGCGCCTATGCCATCGCCGCCGAGAATGCCGCCGATCCGATCACTTCAGAACAGGCTTTCTACGCAGGAGCCA
TCCCCGGCCTCCTCCGCAAGCTCGACCCGCACTCCATCTTCTTCGACCCGGAACAGTTCGAGCAGCTCAAGCGCATGGAG
TCCTCCACCTCCAAAGGCTTCGGCAGCGTCGTCTCCATCCTTCCCGGCCGCGTAATTGTCCTCCAGACCATTTCCGGCAC
TCCGTCCCAGAAGGCGGGCCTCGCGCCCGGAGACGAAATCCTCGCTATCAACGGCTACGTCATCGGCCAGCTCGATATCG
AGCAGCTTCCCCAACTGCTCGAACAATCCCGCCAGCGGCAGGCCCGCCTCGACGTCCGGCGTCCGGGCGTACCGGGCCTC
ATGCATTTCACCCTCACGCCGGAGGAAATGCAGTCCCCCAGCGTGGATCGCGCTTTCTTCCTGGCCGCCGGCATCGGTTA
TATCCGCGTCTCCAGCTTCGACGAAAAGACCGGCCAGCAGATCAAGGCCGCCATCGAAAAACTCGGCGGCGATCGCCTCG
CCGGACTCGTCCTCGACCTGCGCAACAACCCCGGTGGAGTCCTCGGCGCCGCCATCGAGACCTGCTCGCTCTTCCTCAAG
CCCGGCATGAAGATCGTCACCGTGCGCGGCCGCCACGTTCCCGAAACCACCGAAGTGGTCCCCTCGATCGCCGCGCCTTA
CGGCTTCAAGCTCGCCATCCTGGTCAACGAGAAGAGCGCCAGCGCCTCCGAAGTCGTCTCCGGCGCCATGCAGGATCACG
ACCGCGCCACCATCATCGGCGTCCCCAGTTTCGGCAAGGGCCTGGTGCAGAGCGTCTTCCCCTTAACCCAGAACACCGGG
CTCGCACTCACCACCGCTCTCTACTACACTCCCAGCGGCCGCTCCATCCAAAAGCCCTTGGATTCCGCGAAATTCGCGCT
CGGCCCCACTACCGCCCATCCCAACGCGCAAAGCGAATTTCACACGGACAAGGGCCGCCGCGTCACCGGAGGTGGCGGCA
TCCAGCCCGATTTCGTCGTCAATCCCTCGCCCAGCAATCGCCTTCGCGCCGTCCTCGACGCCAGCGCGTCTTTCACCAAC
TTCGCCACCGAATATCTTCGTGCCCACAAGGTCGATGCCGATTTCGAAGTGACTCCGGAACTCCTCGATCAGTTCCGCGT
CTTCCTCTCCGATCGCGAAATCCGCCCCGGTCTCGCCGAGTGGCTCACCGAACGCGACTTCGTCTCCAACCGCCTTAAGA
CCGAGCTCTTCAACCAGGCCATCGGAGTTGAGAAGGGCGACGAAGTCGAAGCCCAGCGCGACCCCGTAATCCTCAAGGCC
CTCGAAGTCATCGGCTAG

Upstream 100 bases:

>100_bases
CCCGAGGCATCTCAGCGAGCTCAAGCAGCGTCAAATGCTCGAGATATTCGGTCTGTGGCCGGCCCCTTCCACCCTCCCAC
GGTAGAATGAAGATGTCCCG

Downstream 100 bases:

>100_bases
TAGCGCTCCGTTCTACTACTGTGTATTTGGGTGTCTGCGGGCCGCGAAGATTCGCGCCGCAAATGAGCCGCGACCGTTAG
CAAGCGATCTCTACGAAATA

Product: C-terminal processing peptidase-3

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MLRSTLVLLCTACLLSAQDDFEKQMRSVIGAYAIAAENAADPITSEQAFYAGAIPGLLRKLDPHSIFFDPEQFEQLKRME
SSTSKGFGSVVSILPGRVIVLQTISGTPSQKAGLAPGDEILAINGYVIGQLDIEQLPQLLEQSRQRQARLDVRRPGVPGL
MHFTLTPEEMQSPSVDRAFFLAAGIGYIRVSSFDEKTGQQIKAAIEKLGGDRLAGLVLDLRNNPGGVLGAAIETCSLFLK
PGMKIVTVRGRHVPETTEVVPSIAAPYGFKLAILVNEKSASASEVVSGAMQDHDRATIIGVPSFGKGLVQSVFPLTQNTG
LALTTALYYTPSGRSIQKPLDSAKFALGPTTAHPNAQSEFHTDKGRRVTGGGGIQPDFVVNPSPSNRLRAVLDASASFTN
FATEYLRAHKVDADFEVTPELLDQFRVFLSDREIRPGLAEWLTERDFVSNRLKTELFNQAIGVEKGDEVEAQRDPVILKA
LEVIG

Sequences:

>Translated_485_residues
MLRSTLVLLCTACLLSAQDDFEKQMRSVIGAYAIAAENAADPITSEQAFYAGAIPGLLRKLDPHSIFFDPEQFEQLKRME
SSTSKGFGSVVSILPGRVIVLQTISGTPSQKAGLAPGDEILAINGYVIGQLDIEQLPQLLEQSRQRQARLDVRRPGVPGL
MHFTLTPEEMQSPSVDRAFFLAAGIGYIRVSSFDEKTGQQIKAAIEKLGGDRLAGLVLDLRNNPGGVLGAAIETCSLFLK
PGMKIVTVRGRHVPETTEVVPSIAAPYGFKLAILVNEKSASASEVVSGAMQDHDRATIIGVPSFGKGLVQSVFPLTQNTG
LALTTALYYTPSGRSIQKPLDSAKFALGPTTAHPNAQSEFHTDKGRRVTGGGGIQPDFVVNPSPSNRLRAVLDASASFTN
FATEYLRAHKVDADFEVTPELLDQFRVFLSDREIRPGLAEWLTERDFVSNRLKTELFNQAIGVEKGDEVEAQRDPVILKA
LEVIG
>Mature_485_residues
MLRSTLVLLCTACLLSAQDDFEKQMRSVIGAYAIAAENAADPITSEQAFYAGAIPGLLRKLDPHSIFFDPEQFEQLKRME
SSTSKGFGSVVSILPGRVIVLQTISGTPSQKAGLAPGDEILAINGYVIGQLDIEQLPQLLEQSRQRQARLDVRRPGVPGL
MHFTLTPEEMQSPSVDRAFFLAAGIGYIRVSSFDEKTGQQIKAAIEKLGGDRLAGLVLDLRNNPGGVLGAAIETCSLFLK
PGMKIVTVRGRHVPETTEVVPSIAAPYGFKLAILVNEKSASASEVVSGAMQDHDRATIIGVPSFGKGLVQSVFPLTQNTG
LALTTALYYTPSGRSIQKPLDSAKFALGPTTAHPNAQSEFHTDKGRRVTGGGGIQPDFVVNPSPSNRLRAVLDASASFTN
FATEYLRAHKVDADFEVTPELLDQFRVFLSDREIRPGLAEWLTERDFVSNRLKTELFNQAIGVEKGDEVEAQRDPVILKA
LEVIG

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=289, Percent_Identity=27.3356401384083, Blast_Score=101, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 52459; Mature: 52459

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSTLVLLCTACLLSAQDDFEKQMRSVIGAYAIAAENAADPITSEQAFYAGAIPGLLRK
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
LDPHSIFFDPEQFEQLKRMESSTSKGFGSVVSILPGRVIVLQTISGTPSQKAGLAPGDEI
CCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCE
LAINGYVIGQLDIEQLPQLLEQSRQRQARLDVRRPGVPGLMHFTLTPEEMQSPSVDRAFF
EEECCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHCCCCCCHHHH
LAAGIGYIRVSSFDEKTGQQIKAAIEKLGGDRLAGLVLDLRNNPGGVLGAAIETCSLFLK
HHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHC
PGMKIVTVRGRHVPETTEVVPSIAAPYGFKLAILVNEKSASASEVVSGAMQDHDRATIIG
CCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEE
VPSFGKGLVQSVFPLTQNTGLALTTALYYTPSGRSIQKPLDSAKFALGPTTAHPNAQSEF
CCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHCCCCCCCEECCCCCCCCCCCCCC
HTDKGRRVTGGGGIQPDFVVNPSPSNRLRAVLDASASFTNFATEYLRAHKVDADFEVTPE
CCCCCCEEECCCCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHH
LLDQFRVFLSDREIRPGLAEWLTERDFVSNRLKTELFNQAIGVEKGDEVEAQRDPVILKA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LEVIG
HHHHC
>Mature Secondary Structure
MLRSTLVLLCTACLLSAQDDFEKQMRSVIGAYAIAAENAADPITSEQAFYAGAIPGLLRK
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
LDPHSIFFDPEQFEQLKRMESSTSKGFGSVVSILPGRVIVLQTISGTPSQKAGLAPGDEI
CCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCE
LAINGYVIGQLDIEQLPQLLEQSRQRQARLDVRRPGVPGLMHFTLTPEEMQSPSVDRAFF
EEECCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHCCCCCCHHHH
LAAGIGYIRVSSFDEKTGQQIKAAIEKLGGDRLAGLVLDLRNNPGGVLGAAIETCSLFLK
HHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHC
PGMKIVTVRGRHVPETTEVVPSIAAPYGFKLAILVNEKSASASEVVSGAMQDHDRATIIG
CCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEE
VPSFGKGLVQSVFPLTQNTGLALTTALYYTPSGRSIQKPLDSAKFALGPTTAHPNAQSEF
CCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHCCCCCCCEECCCCCCCCCCCCCC
HTDKGRRVTGGGGIQPDFVVNPSPSNRLRAVLDASASFTNFATEYLRAHKVDADFEVTPE
CCCCCCEEECCCCCCCCEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHH
LLDQFRVFLSDREIRPGLAEWLTERDFVSNRLKTELFNQAIGVEKGDEVEAQRDPVILKA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LEVIG
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]