| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is leuS [H]
Identifier: 116517205
GI number: 116517205
Start: 227270
End: 229771
Strand: Direct
Name: leuS [H]
Synonym: SPD_0238
Alternate gene names: 116517205
Gene position: 227270-229771 (Clockwise)
Preceding gene: 116515896
Following gene: 116515892
Centisome position: 11.11
GC content: 44.6
Gene sequence:
>2502_bases ATGAGTTTTTATAATCATAAAGAAATTGAGCCTAAGTGGCAGGGCTACTGGGCAGAACATCATACATTTAAGACAGGAAC AGATGCATCAAAACCTAAGTTTTATGCGCTTGATATGTTCCCTTATCCGTCTGGAGTTGGTCTGCACGTAGGACACCCAG AAGGTTATACTGCAACCGATATCCTCAGTCGTTACAAACGTGCGCAAGGCTACAATGTCCTTCACCCAATGGGTTGGGAT GCTTTTGGTTTGCCTGCAGAGCAATACGCTATGGATACTGGTAATGACCCAGCAGAATTTACAGCGGAAAACATTGCCAA CTTCAAACGTCAAATCAATGCGCTTGGATTTTCTTATGACTGGGATCGTGAAGTCAACACAACAGATCCAAACTACTACA AGTGGACTCAATGGATTTTCACCAAGCTTTACGAAAAAGGCTTGGCCTATGAAGCTGAAGTGCCAGTAAACTGGGTTGAG GAATTGGGAACTGCCATTGCCAATGAAGAAGTGCTTCCTGACGGAACTTCTGAGCGTGGAGGCTATCCAGTTGTCCGCAA ACCAATGCGCCAATGGATGCTCAAAATCACGGCTTACGCAGAGCGCTTGCTCAATGACTTAGATGAACTAGATTGGTCAG AGTCTATCAAGGATATGCAACGCAACTGGATTGGTAAATCAACTGGTGCCAATGTAACTTTCAAAGTAAAAGGAACAGAC AAGGAATTTACAGTCTTTACTACTCGTCCGGACACACTTTTCGGTGCGACTTTCACTGTCTTGGCTCCTGAACATGAATT AGTAGACGCTATCACAAGTTCAGAGCAAGCAGAAGCTGTAGCAGACTATAAACACCAAGCCAGCCTTAAGTCTGACTTGG TTCGTACAGACCTTGCTAAGGAAAAAACTGGTGTTTGGACAGGTGCCTATGCCATCAACCCTGTCAATGGTAAGGAAATG CCAATCTGGATTGCGGACTATGTTCTTGCTAGTTATGGAACAGGTGCGGTTATGGCTGTGCCTGCCCACGACCAACGTGA CTGGGAATTTGCCAAACAATTTGACCTTCCAATCGTCGAAGTACTTGAAGGTGGAAATGTCGAAGAAGCTGCCTACACAG AGGATGGCCTGCATGTCAATTCAGACTTCCTAGATGGATTGAACAAAGAAGACGCTATTGCCAAGATTGTGGCTTGCTTG GAAGAAAAAGGCTGTGGTCAGGAGAAGGTTACCTACCGCCTCCGCGACTGGCTCTTTAGCCGTCAACGTTACTGGGGTGA GCCAATTCCAATCATTCATTGGGAAGATGGAACTTCAACAGCTGTTCCTGAAACTGAATTGCCGCTTGTCTTGCCTGTAA CCAAGGATATCCGTCCTTCAGGTACTGGTGAAAGTCCACTAGCTAACTTGACAGATTGGCTTGAAGTGACTCGTGAAGAT GGTGTCAAAGGTCGTCGTGAAACTAACACCATGCCACAATGGGCTGGTTCAAGCTGGTACTACCTCCGCTATATTGACCC GCACAATACTGAGAAATTGGCTGATGAGGACCTCCTCAAACAATGGTTGCCAGTAGATATCTACGTGGGTGGTGCGGAAC ATGCTGTACTTCACTTGCTTTATGCTCGTTTCTGGCATAAATTCCTCTATGACCTCGGTGTTGTTCCGACTAAGGAACCA TTCCAAAAACTCTTTAACCAAGGGATGATTTTGGGAACAAGCTACCGTGACCACCGTGGTGCTCTTGTGGCAACCGACAA GGTTGAAAAACGTGATGGTTCCTTCTTTCATATAGAAACAGGGGAAGAGTTGGAGCAAGCGCCAGCCAAGATGTCTAAAT CGCTCAAGAACGTTGTTAACCCAGATGATGTGGTGGAACAATACGGTGCCGATACCCTTCGTGTTTATGAAATGTTTATG GGACCACTCGATGCTTCGATTGCTTGGTCAGAAGAAGGTTTGGAAGGAAGCCGTAAGTTCCTTGACCGAGTTTACCGTTT GATTACAAGTAAAGAAATCCTTGCGGAAAACAATGGTGCTCTTGACAAGGCTTACAACGAAACAGTCAAAGCTGTCACAG AACAAATTGAGTCTCTCAAATTCAACACAGCTATTGCCCAACTTATGGTCTTTGTCAATGCTGCTAACAAGGAAGATAAG CTTTATGTTGACTATGCCAAAGGCTTTATTCAATTGATTGCACCATTTGCACCTCACTTGGCAGAAGAACTCTGGCAAAC AGTCGCAGAAACAGGTGAGTCAATCTCTTATGTAGCTTGGCCAACTTGGGACGAAAGTAAACTGGTTGAAGACGAAATCG AAATCGTTGTCCAAATCAAAGGTAAAGTCCGTGCCAAACTCATGGTCGCTAAAGACCTATCACGTGAAGAATTGCAAGAA ATTGCTCTAGCGGATGAAAAAGTCAAAGCAGAAATTGACGGTAAGGAAATCGTGAAAGTGATTAGTGTACCAAATAAATT GGTTAATATTGTTGTAAAATAA
Upstream 100 bases:
>100_bases TCAAAATTAATGAGATACAGTATACAGTTTTTTCTTTAAACACATTTCAAATTCCCTCAAAAATGGTATAATAGTAACAT CACAAAATTGGAGAGAGACC
Downstream 100 bases:
>100_bases CCAATTTATTTGCTGATTTCCAACCTCAAACAGTTTCCCAAACTGTTTGAGCCAACTAAACTCGTTAATATCGTTGTGAA ATAAGGTAGGAATCCTTCAG
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 833; Mature: 832
Protein sequence:
>833_residues MSFYNHKEIEPKWQGYWAEHHTFKTGTDASKPKFYALDMFPYPSGVGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWD AFGLPAEQYAMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVE ELGTAIANEEVLPDGTSERGGYPVVRKPMRQWMLKITAYAERLLNDLDELDWSESIKDMQRNWIGKSTGANVTFKVKGTD KEFTVFTTRPDTLFGATFTVLAPEHELVDAITSSEQAEAVADYKHQASLKSDLVRTDLAKEKTGVWTGAYAINPVNGKEM PIWIADYVLASYGTGAVMAVPAHDQRDWEFAKQFDLPIVEVLEGGNVEEAAYTEDGLHVNSDFLDGLNKEDAIAKIVACL EEKGCGQEKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTSTAVPETELPLVLPVTKDIRPSGTGESPLANLTDWLEVTRED GVKGRRETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEP FQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQAPAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFM GPLDASIAWSEEGLEGSRKFLDRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLMVFVNAANKEDK LYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQIKGKVRAKLMVAKDLSREELQE IALADEKVKAEIDGKEIVKVISVPNKLVNIVVK
Sequences:
>Translated_833_residues MSFYNHKEIEPKWQGYWAEHHTFKTGTDASKPKFYALDMFPYPSGVGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWD AFGLPAEQYAMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVE ELGTAIANEEVLPDGTSERGGYPVVRKPMRQWMLKITAYAERLLNDLDELDWSESIKDMQRNWIGKSTGANVTFKVKGTD KEFTVFTTRPDTLFGATFTVLAPEHELVDAITSSEQAEAVADYKHQASLKSDLVRTDLAKEKTGVWTGAYAINPVNGKEM PIWIADYVLASYGTGAVMAVPAHDQRDWEFAKQFDLPIVEVLEGGNVEEAAYTEDGLHVNSDFLDGLNKEDAIAKIVACL EEKGCGQEKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTSTAVPETELPLVLPVTKDIRPSGTGESPLANLTDWLEVTRED GVKGRRETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEP FQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQAPAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFM GPLDASIAWSEEGLEGSRKFLDRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLMVFVNAANKEDK LYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQIKGKVRAKLMVAKDLSREELQE IALADEKVKAEIDGKEIVKVISVPNKLVNIVVK >Mature_832_residues SFYNHKEIEPKWQGYWAEHHTFKTGTDASKPKFYALDMFPYPSGVGLHVGHPEGYTATDILSRYKRAQGYNVLHPMGWDA FGLPAEQYAMDTGNDPAEFTAENIANFKRQINALGFSYDWDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVEE LGTAIANEEVLPDGTSERGGYPVVRKPMRQWMLKITAYAERLLNDLDELDWSESIKDMQRNWIGKSTGANVTFKVKGTDK EFTVFTTRPDTLFGATFTVLAPEHELVDAITSSEQAEAVADYKHQASLKSDLVRTDLAKEKTGVWTGAYAINPVNGKEMP IWIADYVLASYGTGAVMAVPAHDQRDWEFAKQFDLPIVEVLEGGNVEEAAYTEDGLHVNSDFLDGLNKEDAIAKIVACLE EKGCGQEKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTSTAVPETELPLVLPVTKDIRPSGTGESPLANLTDWLEVTREDG VKGRRETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPF QKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIETGEELEQAPAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMG PLDASIAWSEEGLEGSRKFLDRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLMVFVNAANKEDKL YVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQIKGKVRAKLMVAKDLSREELQEI ALADEKVKAEIDGKEIVKVISVPNKLVNIVVK
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=881, Percent_Identity=33.5981838819523, Blast_Score=484, Evalue=1e-136, Organism=Homo sapiens, GI94721239, Length=181, Percent_Identity=28.7292817679558, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI94721241, Length=181, Percent_Identity=28.7292817679558, Blast_Score=76, Evalue=1e-13, Organism=Escherichia coli, GI1786861, Length=865, Percent_Identity=42.7745664739884, Blast_Score=660, Evalue=0.0, Organism=Escherichia coli, GI1790708, Length=398, Percent_Identity=26.8844221105528, Blast_Score=107, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71997517, Length=775, Percent_Identity=30.9677419354839, Blast_Score=353, Evalue=3e-97, Organism=Caenorhabditis elegans, GI71997510, Length=775, Percent_Identity=30.9677419354839, Blast_Score=352, Evalue=4e-97, Organism=Caenorhabditis elegans, GI212645227, Length=372, Percent_Identity=30.3763440860215, Blast_Score=162, Evalue=8e-40, Organism=Caenorhabditis elegans, GI71980946, Length=150, Percent_Identity=32.6666666666667, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6323414, Length=860, Percent_Identity=35.4651162790698, Blast_Score=467, Evalue=1e-132, Organism=Saccharomyces cerevisiae, GI6321531, Length=433, Percent_Identity=26.5588914549654, Blast_Score=114, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6319395, Length=180, Percent_Identity=28.3333333333333, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI21355409, Length=750, Percent_Identity=34.6666666666667, Blast_Score=400, Evalue=1e-111, Organism=Drosophila melanogaster, GI17864482, Length=456, Percent_Identity=23.9035087719298, Blast_Score=109, Evalue=6e-24, Organism=Drosophila melanogaster, GI24653289, Length=456, Percent_Identity=23.9035087719298, Blast_Score=109, Evalue=6e-24, Organism=Drosophila melanogaster, GI281366294, Length=375, Percent_Identity=25.0666666666667, Blast_Score=73, Evalue=9e-13,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 94367; Mature: 94236
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFYNHKEIEPKWQGYWAEHHTFKTGTDASKPKFYALDMFPYPSGVGLHVGHPEGYTATD CCCCCCCCCCCHHCCEEHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCHHH ILSRYKRAQGYNVLHPMGWDAFGLPAEQYAMDTGNDPAEFTAENIANFKRQINALGFSYD HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC WDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVEELGTAIANEEVLPDGTSERG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCC GYPVVRKPMRQWMLKITAYAERLLNDLDELDWSESIKDMQRNWIGKSTGANVTFKVKGTD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCC KEFTVFTTRPDTLFGATFTVLAPEHELVDAITSSEQAEAVADYKHQASLKSDLVRTDLAK CEEEEEECCCCCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EKTGVWTGAYAINPVNGKEMPIWIADYVLASYGTGAVMAVPAHDQRDWEFAKQFDLPIVE HHCCCEECCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCHHH VLEGGNVEEAAYTEDGLHVNSDFLDGLNKEDAIAKIVACLEEKGCGQEKVTYRLRDWLFS HHCCCCCCHHHCCCCCCEECHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RQRYWGEPIPIIHWEDGTSTAVPETELPLVLPVTKDIRPSGTGESPLANLTDWLEVTRED HHHHCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC GVKGRRETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLL CCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHH YARFWHKFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIET HHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCCCCCCCEEEECCHHCCCCCEEEEEC GEELEQAPAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKF CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHH LDRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLMVFVNAANKEDK HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQIK EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHEEEEEEEC GKVRAKLMVAKDLSREELQEIALADEKVKAEIDGKEIVKVISVPNKLVNIVVK CCCEEEEHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure SFYNHKEIEPKWQGYWAEHHTFKTGTDASKPKFYALDMFPYPSGVGLHVGHPEGYTATD CCCCCCCCCCHHCCEEHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCHHH ILSRYKRAQGYNVLHPMGWDAFGLPAEQYAMDTGNDPAEFTAENIANFKRQINALGFSYD HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC WDREVNTTDPNYYKWTQWIFTKLYEKGLAYEAEVPVNWVEELGTAIANEEVLPDGTSERG CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCC GYPVVRKPMRQWMLKITAYAERLLNDLDELDWSESIKDMQRNWIGKSTGANVTFKVKGTD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEECCC KEFTVFTTRPDTLFGATFTVLAPEHELVDAITSSEQAEAVADYKHQASLKSDLVRTDLAK CEEEEEECCCCCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EKTGVWTGAYAINPVNGKEMPIWIADYVLASYGTGAVMAVPAHDQRDWEFAKQFDLPIVE HHCCCEECCEEECCCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHCCCCHHH VLEGGNVEEAAYTEDGLHVNSDFLDGLNKEDAIAKIVACLEEKGCGQEKVTYRLRDWLFS HHCCCCCCHHHCCCCCCEECHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RQRYWGEPIPIIHWEDGTSTAVPETELPLVLPVTKDIRPSGTGESPLANLTDWLEVTRED HHHHCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHC GVKGRRETNTMPQWAGSSWYYLRYIDPHNTEKLADEDLLKQWLPVDIYVGGAEHAVLHLL CCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHH YARFWHKFLYDLGVVPTKEPFQKLFNQGMILGTSYRDHRGALVATDKVEKRDGSFFHIET HHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEECCCCCCCCCEEEECCHHCCCCCEEEEEC GEELEQAPAKMSKSLKNVVNPDDVVEQYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKF CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHH LDRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESLKFNTAIAQLMVFVNAANKEDK HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQIK EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHEEEEEEEC GKVRAKLMVAKDLSREELQEIALADEKVKAEIDGKEIVKVISVPNKLVNIVVK CCCEEEEHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA