| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116517193
Identifier: 116517193
GI number: 116517193
Start: 1025243
End: 1025689
Strand: Reverse
Name: 116517193
Synonym: SPD_1010
Alternate gene names: NA
Gene position: 1025689-1025243 (Counterclockwise)
Preceding gene: 116515952
Following gene: 116515690
Centisome position: 50.13
GC content: 35.12
Gene sequence:
>447_bases ATGACAGATTTATCAAAACAATTACTTGAAAAAGCTCATGGTGGGTTAAAAATAAATCCGGATGAGCAAAGACGCTATCT TGGTACTTTTGAGGAAAGAGTTCTTGGATATGTAGATATTGACACAGCAAATAGCCCTCAGTTAGAAAAAGGCTTTTTAT TTATTTTAGAAAACCTTCAGGAAAAAGCAGAGCCACTATTTGTGAAGATTTCACCAACTATCGAATTTGATAAGCAAGTT TTCTACTTAAAAGAAGCAAAAGAAACTGATAGTCAAGCCACCATAGTATCTGAAGAGCATATTACTTCTCCTTTTGGCCT GGTTATTCATAGCAATGCACCAGTTCAAGTAGAAGAAAAAGACCTTCGACTTGCTTTTCCAAAACTTTGGGAAGTTAAAA AGGAAGAACCAGCCAAAACATCCTTATGGAAGAAATGGTTTAGCTAA
Upstream 100 bases:
>100_bases TCAAGAAAAAACGTTATCTTTGTGCAACTTTTCCTTAACTTTATAAAGTAATCGCTTTCTTTTGTCTGTTTTATTCTAAC TTTTATGATATACTGTTTTC
Downstream 100 bases:
>100_bases ATCTTGCACATATTTAATAAGTGCCCAATATTGGCAGCCGTGCGCTCCAGATAGAGACTGGCATTTTTCAAACTATCTTC TAAAGGTTCACTTTTCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTDLSKQLLEKAHGGLKINPDEQRRYLGTFEERVLGYVDIDTANSPQLEKGFLFILENLQEKAEPLFVKISPTIEFDKQV FYLKEAKETDSQATIVSEEHITSPFGLVIHSNAPVQVEEKDLRLAFPKLWEVKKEEPAKTSLWKKWFS
Sequences:
>Translated_148_residues MTDLSKQLLEKAHGGLKINPDEQRRYLGTFEERVLGYVDIDTANSPQLEKGFLFILENLQEKAEPLFVKISPTIEFDKQV FYLKEAKETDSQATIVSEEHITSPFGLVIHSNAPVQVEEKDLRLAFPKLWEVKKEEPAKTSLWKKWFS >Mature_147_residues TDLSKQLLEKAHGGLKINPDEQRRYLGTFEERVLGYVDIDTANSPQLEKGFLFILENLQEKAEPLFVKISPTIEFDKQVF YLKEAKETDSQATIVSEEHITSPFGLVIHSNAPVQVEEKDLRLAFPKLWEVKKEEPAKTSLWKKWFS
Specific function: Unknown
COG id: COG5506
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17094; Mature: 16962
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLSKQLLEKAHGGLKINPDEQRRYLGTFEERVLGYVDIDTANSPQLEKGFLFILENLQ CCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHH EKAEPLFVKISPTIEFDKQVFYLKEAKETDSQATIVSEEHITSPFGLVIHSNAPVQVEEK HHCCCEEEEEECCEEECCEEEEEECCCCCCCCEEEECHHHCCCCEEEEEECCCCEEECCC DLRLAFPKLWEVKKEEPAKTSLWKKWFS CCEEECHHHHCCCCCCCCHHHHHHHHCC >Mature Secondary Structure TDLSKQLLEKAHGGLKINPDEQRRYLGTFEERVLGYVDIDTANSPQLEKGFLFILENLQ CCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHH EKAEPLFVKISPTIEFDKQVFYLKEAKETDSQATIVSEEHITSPFGLVIHSNAPVQVEEK HHCCCEEEEEECCEEECCEEEEEECCCCCCCCEEEECHHHCCCCEEEEEECCCCEEECCC DLRLAFPKLWEVKKEEPAKTSLWKKWFS CCEEECHHHHCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA