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The map label for this gene is dsbE [C]

Identifier: 116517064

GI number: 116517064

Start: 593895

End: 594461

Strand: Direct

Name: dsbE [C]

Synonym: SPD_0572

Alternate gene names: 116517064

Gene position: 593895-594461 (Clockwise)

Preceding gene: 116515707

Following gene: 116515600

Centisome position: 29.03

GC content: 42.86

Gene sequence:

>567_bases
ATGAAAAAATGGCAAACATGTGTTCTTGGAGCAGGTTCGCTCCTTTGTTTGACGGCTTGTTCAGGCAAGTCCGTGACTAG
TGAACACCAAACGAAAGATGAAATGAAGACGGAGCAGACAGCTAGTAAAACAAGCGCAGCTAAAGGGAAAGAGGTGGCTG
ATTTTGAATTGATGGGAGTAGATGGCAAGACCTACCGTTTATCTGATTACAAGGGCAAGAAAGTCTATCTCAAATTCTGG
GCTTCTTGGTGTTCCATCTGTCTGGCTAGTCTTCCAGATACGGATGAGATTGCTAAAGAAGCTGGTGATGACTATGTGGT
CTTGACAGTAGTGTCACCAGGACATAAGGGAGAGCAATCTGAAGCGGACTTTAAGAATTGGTATAAGGGATTGGATTATA
AAAATCTCCCAGTCCTAGTTGACCCATCAGGCAAACTTTTGGAAACTTATGGTGTCCGTTCTTACCCAACCCAAGCCTTT
ATAGACAAAGAAGGCAAGCTGGTCAAAACACATCCAGGATTCATGGAAAAAGATGCAATTTTGCAAACTTTGAAGGAATT
ATCCTAG

Upstream 100 bases:

>100_bases
GTGGGTGGTTTTCTCATTATTGTGATGGGATTCTTGGTTCTGTTTGGAAATGCTTCAATTTTAAGTCAATTATTTGAATA
AAATGGAAAGGAATATCAAT

Downstream 100 bases:

>100_bases
GAGGCGTCTTATGAATGATAAGTTAAAAATCTTCTTGTTGCTAGGAGTATTTTTTCTAGCCATAACCGGTTTCTATGTTC
TATTGATACGAAATGCAGGG

Product: thioredoxin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKKWQTCVLGAGSLLCLTACSGKSVTSEHQTKDEMKTEQTASKTSAAKGKEVADFELMGVDGKTYRLSDYKGKKVYLKFW
ASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAF
IDKEGKLVKTHPGFMEKDAILQTLKELS

Sequences:

>Translated_188_residues
MKKWQTCVLGAGSLLCLTACSGKSVTSEHQTKDEMKTEQTASKTSAAKGKEVADFELMGVDGKTYRLSDYKGKKVYLKFW
ASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAF
IDKEGKLVKTHPGFMEKDAILQTLKELS
>Mature_188_residues
MKKWQTCVLGAGSLLCLTACSGKSVTSEHQTKDEMKTEQTASKTSAAKGKEVADFELMGVDGKTYRLSDYKGKKVYLKFW
ASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAF
IDKEGKLVKTHPGFMEKDAILQTLKELS

Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: NA

Molecular weight: Translated: 20792; Mature: 20792

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWQTCVLGAGSLLCLTACSGKSVTSEHQTKDEMKTEQTASKTSAAKGKEVADFELMGV
CCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
DGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQS
CCCEEEECCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCCC
EADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAI
CHHHHHHHHCCCCCCCCEEECCCCCEEHHCCCCCCCCHHEECCCCCEEECCCCCCCHHHH
LQTLKELS
HHHHHHCC
>Mature Secondary Structure
MKKWQTCVLGAGSLLCLTACSGKSVTSEHQTKDEMKTEQTASKTSAAKGKEVADFELMGV
CCCCCEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
DGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQS
CCCEEEECCCCCCEEHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCCC
EADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAI
CHHHHHHHHCCCCCCCCEEECCCCCEEHHCCCCCCCCHHEECCCCCEEECCCCCCCHHHH
LQTLKELS
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]