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The map label for this gene is ccdA-1 [C]

Identifier: 116515707

GI number: 116515707

Start: 593165

End: 593875

Strand: Direct

Name: ccdA-1 [C]

Synonym: SPD_0571

Alternate gene names: 116515707

Gene position: 593165-593875 (Clockwise)

Preceding gene: 116516563

Following gene: 116517064

Centisome position: 28.99

GC content: 41.49

Gene sequence:

>711_bases
ATGGGTCATATTTTCTTTTTTCTAAGTGTCTTTTTGGCAGGGATTCTATCCTTCTTTTCTCCTTGTATCTTACCTTTGTT
ACCGGTCTATACAGGAGTGTTACTAGATGATAAGGATGGTGCTCAGGCTTCTAGCGGCAAATTTTCAATTTCAGTTACTA
GTTTATTACGAACTCTGGCCTTTATAGCAGGAATTTCCTTTATATTTATTTTGTTGGGCTATGGAGCTGGTTTTTTAGGC
GATTTGCTTTATGCTTCTTGGTTCCAATATCTTACTGGGGCAATTATTATCCTTCTTGGTTTGCACCAAATGGAGATTCT
ACACTTTAAGGGGCTTTATAAGGAAAAGAGGCTACAACTGCAAGGACAGGGGCAAAATGGTAAGGGCTATAGTCAGGCAT
TTTTATTGGGCTTGACCTTTAGTTTTGCTTGGACGCCTTGCGTGGGGCCGGTTCTGGGGTCTGTTTTGGCCTTGGCGGCT
TCAGGTGGTTCAGGAGCTTGGCAGGGAGCTGGTCTCATGTTGGTGTATACGCTGGGCTTGGCGCTACCATTCTTGCTTCT
AGCTCTGACCTCTAGTTATGTTTTGAAACATTTCCGAAAACTTCATCCCTATCTCGGAATCCTCAAAAAAGTGGGTGGTT
TTCTCATTATTGTGATGGGATTCTTGGTTCTGTTTGGAAATGCTTCAATTTTAAGTCAATTATTTGAATAA

Upstream 100 bases:

>100_bases
TCATCTGATTAAATTCCTATTTTCCCCTATCATTGTCCCTGTTTTTTCGAAAATGGAAGGAGTATAATAAATCTATCAAT
AAAATGATAGGAGGAACTTT

Downstream 100 bases:

>100_bases
AATGGAAAGGAATATCAATATGAAAAAATGGCAAACATGTGTTCTTGGAGCAGGTTCGCTCCTTTGTTTGACGGCTTGTT
CAGGCAAGTCCGTGACTAGT

Product: cytochrome c-type biogenesis protein CcdA

Products: DsbDoxidized; DsbGreduced [C]

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MGHIFFFLSVFLAGILSFFSPCILPLLPVYTGVLLDDKDGAQASSGKFSISVTSLLRTLAFIAGISFIFILLGYGAGFLG
DLLYASWFQYLTGAIIILLGLHQMEILHFKGLYKEKRLQLQGQGQNGKGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAA
SGGSGAWQGAGLMLVYTLGLALPFLLLALTSSYVLKHFRKLHPYLGILKKVGGFLIIVMGFLVLFGNASILSQLFE

Sequences:

>Translated_236_residues
MGHIFFFLSVFLAGILSFFSPCILPLLPVYTGVLLDDKDGAQASSGKFSISVTSLLRTLAFIAGISFIFILLGYGAGFLG
DLLYASWFQYLTGAIIILLGLHQMEILHFKGLYKEKRLQLQGQGQNGKGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAA
SGGSGAWQGAGLMLVYTLGLALPFLLLALTSSYVLKHFRKLHPYLGILKKVGGFLIIVMGFLVLFGNASILSQLFE
>Mature_235_residues
GHIFFFLSVFLAGILSFFSPCILPLLPVYTGVLLDDKDGAQASSGKFSISVTSLLRTLAFIAGISFIFILLGYGAGFLGD
LLYASWFQYLTGAIIILLGLHQMEILHFKGLYKEKRLQLQGQGQNGKGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAAS
GGSGAWQGAGLMLVYTLGLALPFLLLALTSSYVLKHFRKLHPYLGILKKVGGFLIIVMGFLVLFGNASILSQLFE

Specific function: Could be involved in cytochrome c synthesis [H]

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: 1.8.1.8 [C]

Molecular weight: Translated: 25431; Mature: 25300

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHIFFFLSVFLAGILSFFSPCILPLLPVYTGVLLDDKDGAQASSGKFSISVTSLLRTLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEHHHHHHHHH
FIAGISFIFILLGYGAGFLGDLLYASWFQYLTGAIIILLGLHQMEILHFKGLYKEKRLQL
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGQGQNGKGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
ALPFLLLALTSSYVLKHFRKLHPYLGILKKVGGFLIIVMGFLVLFGNASILSQLFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure 
GHIFFFLSVFLAGILSFFSPCILPLLPVYTGVLLDDKDGAQASSGKFSISVTSLLRTLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEHHHHHHHHH
FIAGISFIFILLGYGAGFLGDLLYASWFQYLTGAIIILLGLHQMEILHFKGLYKEKRLQL
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGQGQNGKGYSQAFLLGLTFSFAWTPCVGPVLGSVLALAASGGSGAWQGAGLMLVYTLGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
ALPFLLLALTSSYVLKHFRKLHPYLGILKKVGGFLIIVMGFLVLFGNASILSQLFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]

Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]