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The map label for this gene is 116516928

Identifier: 116516928

GI number: 116516928

Start: 89931

End: 91406

Strand: Direct

Name: 116516928

Synonym: SPD_0090

Alternate gene names: NA

Gene position: 89931-91406 (Clockwise)

Preceding gene: 116516742

Following gene: 116517133

Centisome position: 4.4

GC content: 38.48

Gene sequence:

>1476_bases
ATGAAAAACTGGAAAAAATATGCTTTTGCATCTGCTAGTGTAGTCGCTCTGGCTGCAGGTCTTGCTGCTTGTGGAAATTT
GACAGGTAACAGCAAAAAAGCTGCTGATTCAGGTGACAAACCTGTTATCAAAATGTACCAAATCGGTGACAAACCAGACA
ACTTGGATGAATTGTTAGCAAATGCCAACAAAATCATCGAAGAAAAAGTTGGTGCCAAATTGGATATCCAATACCTTGGC
TGGGGTGACTATGGTAAGAAAATGTCAGTTATCACATCATCTGGTGAAAACTATGATATTGCCTTTGCAGATAACTATAT
TGTAAATGCTCAAAAAGGTGCTTACGCTGACTTGACAGAATTGTACAAAAAAGAAGGTAAAGACCTTTACAAAGCACTTG
ACCCAGCTTACATCAAGGGTAATACTGTAAATGGTAAGATTTACGCTGTTCCAGTTGCAGCCAACGTTGCATCATCTCAA
AACTTTGCCTTCAACGGAACTCTCCTTGCTAAATATGGTATCGATATTTCAGGTGTTACTTCTTACGAAACTCTTGAGCC
AGTCTTGAAACAAATCAAAGAAAAAGCTCCAGACGTAGTACCATTTGCTATTGGTAAAGTTTTCATCCCATCTGATAACT
TTGACTACCCAGTAGCAAACGGTCTTCCATTCGTTATCGACCTTGAAGGCGATACTACTAAAGTTGTAAACCGTTACGAA
GTGCCTCGTTTCAAAGAACACTTGAAGACTCTTCACAAATTCTATGAAGCTGGCTACATTCCAAAAGACGTCGCAACAAG
CGATACTTCCTTTGACCTTCAACAAGATACTTGGTTCGTTCGTGAAGAAACAGTAGGACCAGCTGACTACGGTAACAGCT
TGCTTTCACGTGTTGCCAACAAAGATATCCAAATCAAACCAATTACTAACTTCATCAAGAAAAACCAAACAACACAAGTT
GCTAACTTTGTCATCTCAAACAACTCTAAGAACAAAGAAAAATCAATGGAAATCTTGAACCTCTTGAATACGAATCCAGA
ACTCTTGAACGGTCTTGTTTACGGTCCAGAAGGCAAGAACTGGGAAAAAATTGAAGGTAAAGAAAACCGTGTTCGCGTTC
TTGATGGCTACAAAGGAAACACTCACATGGGTGGATGGAACACTGGTAACAACTGGATCCTTTACATCAACGAAAACGTT
ACAGACCAACAAATCGAAAATTCTAAGAAAGAATTGGCAGAAGCTAAAGAATCTCCAGCGCTTGGATTTATCTTCAATAC
TGACAATGTGAAATCTGAAATCTCAGCTATTGCTAACACAATGCAACAATTTGATACAGCTATCAACACTGGTACTGTAG
ACCCAGATAAAGCGATTCCAGAATTGATGGAAAAATTGAAATCTGAAGGTGCCTACGAAAAAGTATTGAACGAAATGCAA
AAACAATACGATGAATTCTTGAAAAACAAAAAATAA

Upstream 100 bases:

>100_bases
GCAGCCTGCGGCTAGTTTTCTAGTTTGCTCTTTGATTTTCATTGAGTATAAGATCATTACATTGTTTATAAGTTTAAAAA
TAAAAAAAGGAGTTTTTATC

Downstream 100 bases:

>100_bases
TCAGCTAAATTGATTTCGTGTATTCATTCCTAACTCCTAAAATAAGAATCACTGCTTTCCTCAGGTTGGTCTGGGGAGGG
CAGTGGTTTTTTTGGCACAA

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MKNWKKYAFASASVVALAAGLAACGNLTGNSKKAADSGDKPVIKMYQIGDKPDNLDELLANANKIIEEKVGAKLDIQYLG
WGDYGKKMSVITSSGENYDIAFADNYIVNAQKGAYADLTELYKKEGKDLYKALDPAYIKGNTVNGKIYAVPVAANVASSQ
NFAFNGTLLAKYGIDISGVTSYETLEPVLKQIKEKAPDVVPFAIGKVFIPSDNFDYPVANGLPFVIDLEGDTTKVVNRYE
VPRFKEHLKTLHKFYEAGYIPKDVATSDTSFDLQQDTWFVREETVGPADYGNSLLSRVANKDIQIKPITNFIKKNQTTQV
ANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGPEGKNWEKIEGKENRVRVLDGYKGNTHMGGWNTGNNWILYINENV
TDQQIENSKKELAEAKESPALGFIFNTDNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGAYEKVLNEMQ
KQYDEFLKNKK

Sequences:

>Translated_491_residues
MKNWKKYAFASASVVALAAGLAACGNLTGNSKKAADSGDKPVIKMYQIGDKPDNLDELLANANKIIEEKVGAKLDIQYLG
WGDYGKKMSVITSSGENYDIAFADNYIVNAQKGAYADLTELYKKEGKDLYKALDPAYIKGNTVNGKIYAVPVAANVASSQ
NFAFNGTLLAKYGIDISGVTSYETLEPVLKQIKEKAPDVVPFAIGKVFIPSDNFDYPVANGLPFVIDLEGDTTKVVNRYE
VPRFKEHLKTLHKFYEAGYIPKDVATSDTSFDLQQDTWFVREETVGPADYGNSLLSRVANKDIQIKPITNFIKKNQTTQV
ANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGPEGKNWEKIEGKENRVRVLDGYKGNTHMGGWNTGNNWILYINENV
TDQQIENSKKELAEAKESPALGFIFNTDNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGAYEKVLNEMQ
KQYDEFLKNKK
>Mature_491_residues
MKNWKKYAFASASVVALAAGLAACGNLTGNSKKAADSGDKPVIKMYQIGDKPDNLDELLANANKIIEEKVGAKLDIQYLG
WGDYGKKMSVITSSGENYDIAFADNYIVNAQKGAYADLTELYKKEGKDLYKALDPAYIKGNTVNGKIYAVPVAANVASSQ
NFAFNGTLLAKYGIDISGVTSYETLEPVLKQIKEKAPDVVPFAIGKVFIPSDNFDYPVANGLPFVIDLEGDTTKVVNRYE
VPRFKEHLKTLHKFYEAGYIPKDVATSDTSFDLQQDTWFVREETVGPADYGNSLLSRVANKDIQIKPITNFIKKNQTTQV
ANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGPEGKNWEKIEGKENRVRVLDGYKGNTHMGGWNTGNNWILYINENV
TDQQIENSKKELAEAKESPALGFIFNTDNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGAYEKVLNEMQ
KQYDEFLKNKK

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54486; Mature: 54486

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNWKKYAFASASVVALAAGLAACGNLTGNSKKAADSGDKPVIKMYQIGDKPDNLDELLA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH
NANKIIEEKVGAKLDIQYLGWGDYGKKMSVITSSGENYDIAFADNYIVNAQKGAYADLTE
HHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCEEEECCCCCHHHHHH
LYKKEGKDLYKALDPAYIKGNTVNGKIYAVPVAANVASSQNFAFNGTLLAKYGIDISGVT
HHHHHCHHHHHHCCCCEEECCCCCCEEEEEEEEEECCCCCCEEECCEEEEEECCCCCCCC
SYETLEPVLKQIKEKAPDVVPFAIGKVFIPSDNFDYPVANGLPFVIDLEGDTTKVVNRYE
CHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHCC
VPRFKEHLKTLHKFYEAGYIPKDVATSDTSFDLQQDTWFVREETVGPADYGNSLLSRVAN
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHC
KDIQIKPITNFIKKNQTTQVANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGPEGKN
CCEEEEHHHHHHHCCCCCEEHEEEEECCCCCHHHHHHHHHHHCCCHHHHCCEEECCCCCC
WEKIEGKENRVRVLDGYKGNTHMGGWNTGNNWILYINENVTDQQIENSKKELAEAKESPA
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCC
LGFIFNTDNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGAYEKVLNEMQ
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
KQYDEFLKNKK
HHHHHHHHCCC
>Mature Secondary Structure
MKNWKKYAFASASVVALAAGLAACGNLTGNSKKAADSGDKPVIKMYQIGDKPDNLDELLA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH
NANKIIEEKVGAKLDIQYLGWGDYGKKMSVITSSGENYDIAFADNYIVNAQKGAYADLTE
HHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCEEEECCCCCHHHHHH
LYKKEGKDLYKALDPAYIKGNTVNGKIYAVPVAANVASSQNFAFNGTLLAKYGIDISGVT
HHHHHCHHHHHHCCCCEEECCCCCCEEEEEEEEEECCCCCCEEECCEEEEEECCCCCCCC
SYETLEPVLKQIKEKAPDVVPFAIGKVFIPSDNFDYPVANGLPFVIDLEGDTTKVVNRYE
CHHHHHHHHHHHHHHCCCEEEEECCEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHCC
VPRFKEHLKTLHKFYEAGYIPKDVATSDTSFDLQQDTWFVREETVGPADYGNSLLSRVAN
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHC
KDIQIKPITNFIKKNQTTQVANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGPEGKN
CCEEEEHHHHHHHCCCCCEEHEEEEECCCCCHHHHHHHHHHHCCCHHHHCCEEECCCCCC
WEKIEGKENRVRVLDGYKGNTHMGGWNTGNNWILYINENVTDQQIENSKKELAEAKESPA
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCC
LGFIFNTDNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGAYEKVLNEMQ
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
KQYDEFLKNKK
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA