| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
Click here to switch to the map view.
The map label for this gene is 116516854
Identifier: 116516854
GI number: 116516854
Start: 612024
End: 612647
Strand: Direct
Name: 116516854
Synonym: SPD_0585
Alternate gene names: NA
Gene position: 612024-612647 (Clockwise)
Preceding gene: 116517076
Following gene: 116516699
Centisome position: 29.91
GC content: 40.54
Gene sequence:
>624_bases ATGACTGATATTAAAACTTTGGCTCTAAAGTATGGAGGTTATACAAGTCTGGACAAGGTCTATCTGGATCAGCTTCTAGC TGGTAAAACAGATCAGGAGCAGTTAACACTTATTACACCTCCGCCAAGTGTTGTTAATGCCTACTTTGCAGAACTCTATC AGAAAAAGAGTCCTCAGGCTGCGACGGATTATTTTGCAGAACTCAGTCAGGAACTGAATCTTTACAATACTGAGCCAAGT TTCACTCTAGAAAATAAGCCTTTTATTCGGCTTAATCTGTCTGGTAAATCCTTTGGTTTTTGTTATGAGAGTGACGGCCT TGGTCGGATTTTCTTTGAAAATGAGGAGAAAATCTCGGATGACTTGCTCTTTGAAATTGCGCAAATTTTCCCCCATCAAT TAGTCTTTGAAGAGTCTGGTAAGATTTACATGAAGCTTGTCGAGGACGAGGAAGTTATCAGCCTAGAAAGTCTCACAGCT TTGACTGATTTGGAAAGATTGGCTGATGGTCGAAAACGTCTCAAAGGCTACAGCCAAGAGGATTTATTGCAAGAAGCTGC TGCTTTTTCTGGCAAACGCTATTTCCGATCGGAAAACCGCACAGCCATGTTATATATTGATTAA
Upstream 100 bases:
>100_bases GAGAGTGTTGCAATTCTGGAAGAACGTGATTATCAGGAAGACGGCGAAGTGATTACAGGCTACATTTCCGAGAAAAATAA ATGGAGGTTAGAAGAATTTT
Downstream 100 bases:
>100_bases TTAGAAAGTATCGAATGGATATTCAATTTTTAGGAACGGGGGCTGGTCAGCCCTCTAAAGCCCGCAACGTTTCAAGTCTC GCCCTGAAACTTTTGGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTDIKTLALKYGGYTSLDKVYLDQLLAGKTDQEQLTLITPPPSVVNAYFAELYQKKSPQAATDYFAELSQELNLYNTEPS FTLENKPFIRLNLSGKSFGFCYESDGLGRIFFENEEKISDDLLFEIAQIFPHQLVFEESGKIYMKLVEDEEVISLESLTA LTDLERLADGRKRLKGYSQEDLLQEAAAFSGKRYFRSENRTAMLYID
Sequences:
>Translated_207_residues MTDIKTLALKYGGYTSLDKVYLDQLLAGKTDQEQLTLITPPPSVVNAYFAELYQKKSPQAATDYFAELSQELNLYNTEPS FTLENKPFIRLNLSGKSFGFCYESDGLGRIFFENEEKISDDLLFEIAQIFPHQLVFEESGKIYMKLVEDEEVISLESLTA LTDLERLADGRKRLKGYSQEDLLQEAAAFSGKRYFRSENRTAMLYID >Mature_206_residues TDIKTLALKYGGYTSLDKVYLDQLLAGKTDQEQLTLITPPPSVVNAYFAELYQKKSPQAATDYFAELSQELNLYNTEPSF TLENKPFIRLNLSGKSFGFCYESDGLGRIFFENEEKISDDLLFEIAQIFPHQLVFEESGKIYMKLVEDEEVISLESLTAL TDLERLADGRKRLKGYSQEDLLQEAAAFSGKRYFRSENRTAMLYID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23685; Mature: 23554
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIKTLALKYGGYTSLDKVYLDQLLAGKTDQEQLTLITPPPSVVNAYFAELYQKKSPQA CCCHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCH ATDYFAELSQELNLYNTEPSFTLENKPFIRLNLSGKSFGFCYESDGLGRIFFENEEKISD HHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCCEEEEECCCCCEEEEECCCHHHHH DLLFEIAQIFPHQLVFEESGKIYMKLVEDEEVISLESLTALTDLERLADGRKRLKGYSQE HHHHHHHHHCCHHEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DLLQEAAAFSGKRYFRSENRTAMLYID HHHHHHHHHCCHHHHCCCCCEEEEEEC >Mature Secondary Structure TDIKTLALKYGGYTSLDKVYLDQLLAGKTDQEQLTLITPPPSVVNAYFAELYQKKSPQA CCHHEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCH ATDYFAELSQELNLYNTEPSFTLENKPFIRLNLSGKSFGFCYESDGLGRIFFENEEKISD HHHHHHHHHHHCCCCCCCCCEEECCCCEEEEEECCCCEEEEECCCCCEEEEECCCHHHHH DLLFEIAQIFPHQLVFEESGKIYMKLVEDEEVISLESLTALTDLERLADGRKRLKGYSQE HHHHHHHHHCCHHEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DLLQEAAAFSGKRYFRSENRTAMLYID HHHHHHHHHCCHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA