| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is pabB [H]
Identifier: 116516803
GI number: 116516803
Start: 604678
End: 606399
Strand: Direct
Name: pabB [H]
Synonym: SPD_0578
Alternate gene names: 116516803
Gene position: 604678-606399 (Clockwise)
Preceding gene: 116515780
Following gene: 116516626
Centisome position: 29.55
GC content: 43.09
Gene sequence:
>1722_bases ATGCATAGAAAAACAGTGATTGATTTTAGGGCTTTGGGGGAGAGATACATCTTTACCAAGCCGATTAAAGAGTTGAAAAC GAGAAATTTAACAGAAGTGGCAGATTTGCTGGCACAAGTGGAAAGCTATCAAGAGCAAGGCTATTATGTGGTGGGTTATG TCAGCTACGAGGCTGCACCTGCTTTTGAGGAAAAATTAGCAGTTCATAAGGCTCCTCTACTGGGCGAGTACTTGCTTTAC TTTACTGTTCATGATAGGGTAGAAACATCCCCTATTCCTCTGACTTATGATGAGGTTGATTTGCCTTCAAATTGGCAGGA AGTAACGTCTGCAGCAGACTATGAAAAGGCTATTGCACAGATACATCATCATCTACGGCAGGGTGATACCTATCAGGTCA ACTACACCGTCCAACTCAAACAAGATTTAAGCGCCAATCCTTTTGCTATCTACAATCGCATGGTGGTAGAGCAGGAGGCG GGCTACAATGCCTATGTGGAACATGACGATATGGCAGTAATTTCCATGAGCCCAGAGCTCTTTTTTGAGCAAAATGACCG CGAATTGACAACGCGACCAATGAAGGGAACGACTCAGCGTGCCATAACTGACCAAGAAGACTTGGAGCAGGCCAGTTGGT TGGAACAGGATTCCAAAAATCGCTCTGAAAATATGATGATTGTGGACCTCTTGCGCAATGATATGAATCGTATTTCTGAG GTGGGGAGTGAGCACGTGGAGCGTCTCTGCCAAGTGGAGCAGTATTCAACTGTTTGGCAGATGACTTCGACTATCAAGAG TCAGTTACGAGCAGATGTTGATTTAGTTACAATTTTTCGCTCTCTCTTTCCTTGTGGATCTATAACGGGAGCTCCGAAAA TTGCGACTATGGAGATTATCAAGGACTTGGAGCCACAACCGCGTGGAGTCTACTGTGGAACGATTGGTCTCTTGCATCCA AATGGACGACGGATTTTTAATGTTGCTATCCGAACTATTCAACTGCATCAAGGGGAAGCCATCTATGGAGTTGGCGGAGG TATTACATGGGATAGCACCTGGCAATCTGAATACCGCGAGGTTCATCAAAAGGCAGCTGTTCTCTATCGTAAACAAGCTC GTTTCCAGCTGATTACTACTGGAAAAATCAGCCAGAAGAACTTGCTGTTTGAAGAACAACATTTGGAAAGACTGAGAACA GCTAGTCGATATTTTGCCTTTCCTTATGATGCAGAAGACTTAAGACAAAAGATAGAGGCGGAGTGTCAGTCTTGTGACAT TGATCAAGACTATCGCTTGCGAATTTCTCTCAGTAAGTCTGGAGAGATAGAACTTAGTCGACAAATCTTAACACCTCTTA GTCTACATTTTTGTCAGGCCAAACTTTGTCTTCAGGAAGCCAATTTGCAACAAGCCTTTACCTATTTTAAAACGACTTAC AGACCGCATTTAAACCTAGGGGAACAAGAGATTATTTACCACAATAAGTCAGGAGAACTGCTTGAAACCTCTATCGGAAA TTTGGTTTTGAAAATTGCTGGGAAACTCTACACACCGCCTATCAGACTTGGTATCTTGCCAGGAATTTATCGCCAGTATT TACTAGAAACAGGACAAGTAGAAGAGAAAGTCTTGACCTTGACAGATTTTGCCCAAGCAGAAGCTATTTATGGCTGTAAT GCAGTGAGAGGCTTGTATGAATTAAGCCTAGAGGAAAATTAG
Upstream 100 bases:
>100_bases TAGTGATCTATTTACTGCACCACAAGCATAGGGATGAATAAAATCGTAAAAAGGTAGATCAGCTTTGTCTGTATCTGCCT TTTTATGCTATACTTAAGGT
Downstream 100 bases:
>100_bases ATGAAACTGGTATTTTTACACGGTTTAGGGGAGTCAGCAGAGTCTTGGAAAGAAGTTCGGAATCAATTGAAGGATAAGCC CACAGAGACTCTTGAATTGC
Product: para-aminobenzoate synthase, component I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MHRKTVIDFRALGERYIFTKPIKELKTRNLTEVADLLAQVESYQEQGYYVVGYVSYEAAPAFEEKLAVHKAPLLGEYLLY FTVHDRVETSPIPLTYDEVDLPSNWQEVTSAADYEKAIAQIHHHLRQGDTYQVNYTVQLKQDLSANPFAIYNRMVVEQEA GYNAYVEHDDMAVISMSPELFFEQNDRELTTRPMKGTTQRAITDQEDLEQASWLEQDSKNRSENMMIVDLLRNDMNRISE VGSEHVERLCQVEQYSTVWQMTSTIKSQLRADVDLVTIFRSLFPCGSITGAPKIATMEIIKDLEPQPRGVYCGTIGLLHP NGRRIFNVAIRTIQLHQGEAIYGVGGGITWDSTWQSEYREVHQKAAVLYRKQARFQLITTGKISQKNLLFEEQHLERLRT ASRYFAFPYDAEDLRQKIEAECQSCDIDQDYRLRISLSKSGEIELSRQILTPLSLHFCQAKLCLQEANLQQAFTYFKTTY RPHLNLGEQEIIYHNKSGELLETSIGNLVLKIAGKLYTPPIRLGILPGIYRQYLLETGQVEEKVLTLTDFAQAEAIYGCN AVRGLYELSLEEN
Sequences:
>Translated_573_residues MHRKTVIDFRALGERYIFTKPIKELKTRNLTEVADLLAQVESYQEQGYYVVGYVSYEAAPAFEEKLAVHKAPLLGEYLLY FTVHDRVETSPIPLTYDEVDLPSNWQEVTSAADYEKAIAQIHHHLRQGDTYQVNYTVQLKQDLSANPFAIYNRMVVEQEA GYNAYVEHDDMAVISMSPELFFEQNDRELTTRPMKGTTQRAITDQEDLEQASWLEQDSKNRSENMMIVDLLRNDMNRISE VGSEHVERLCQVEQYSTVWQMTSTIKSQLRADVDLVTIFRSLFPCGSITGAPKIATMEIIKDLEPQPRGVYCGTIGLLHP NGRRIFNVAIRTIQLHQGEAIYGVGGGITWDSTWQSEYREVHQKAAVLYRKQARFQLITTGKISQKNLLFEEQHLERLRT ASRYFAFPYDAEDLRQKIEAECQSCDIDQDYRLRISLSKSGEIELSRQILTPLSLHFCQAKLCLQEANLQQAFTYFKTTY RPHLNLGEQEIIYHNKSGELLETSIGNLVLKIAGKLYTPPIRLGILPGIYRQYLLETGQVEEKVLTLTDFAQAEAIYGCN AVRGLYELSLEEN >Mature_573_residues MHRKTVIDFRALGERYIFTKPIKELKTRNLTEVADLLAQVESYQEQGYYVVGYVSYEAAPAFEEKLAVHKAPLLGEYLLY FTVHDRVETSPIPLTYDEVDLPSNWQEVTSAADYEKAIAQIHHHLRQGDTYQVNYTVQLKQDLSANPFAIYNRMVVEQEA GYNAYVEHDDMAVISMSPELFFEQNDRELTTRPMKGTTQRAITDQEDLEQASWLEQDSKNRSENMMIVDLLRNDMNRISE VGSEHVERLCQVEQYSTVWQMTSTIKSQLRADVDLVTIFRSLFPCGSITGAPKIATMEIIKDLEPQPRGVYCGTIGLLHP NGRRIFNVAIRTIQLHQGEAIYGVGGGITWDSTWQSEYREVHQKAAVLYRKQARFQLITTGKISQKNLLFEEQHLERLRT ASRYFAFPYDAEDLRQKIEAECQSCDIDQDYRLRISLSKSGEIELSRQILTPLSLHFCQAKLCLQEANLQQAFTYFKTTY RPHLNLGEQEIIYHNKSGELLETSIGNLVLKIAGKLYTPPIRLGILPGIYRQYLLETGQVEEKVLTLTDFAQAEAIYGCN AVRGLYELSLEEN
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=268, Percent_Identity=37.6865671641791, Blast_Score=190, Evalue=2e-49, Organism=Escherichia coli, GI1787518, Length=292, Percent_Identity=29.1095890410959, Blast_Score=126, Evalue=4e-30, Organism=Escherichia coli, GI1786809, Length=244, Percent_Identity=22.9508196721311, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI87082077, Length=209, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320935, Length=282, Percent_Identity=33.3333333333333, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6324361, Length=282, Percent_Identity=29.0780141843972, Blast_Score=119, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 65820; Mature: 65820
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRKTVIDFRALGERYIFTKPIKELKTRNLTEVADLLAQVESYQEQGYYVVGYVSYEAAP CCCCEEEHHHHCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC AFEEKLAVHKAPLLGEYLLYFTVHDRVETSPIPLTYDEVDLPSNWQEVTSAADYEKAIAQ HHHHHHHHHCCCHHHCEEEEEEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHH IHHHLRQGDTYQVNYTVQLKQDLSANPFAIYNRMVVEQEAGYNAYVEHDDMAVISMSPEL HHHHHHCCCEEEEEEEEEEECCCCCCCHHHHHHHHEECCCCCCEEEECCCEEEEEECCHH FFEQNDRELTTRPMKGTTQRAITDQEDLEQASWLEQDSKNRSENMMIVDLLRNDMNRISE EEECCCCEEECCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHH VGSEHVERLCQVEQYSTVWQMTSTIKSQLRADVDLVTIFRSLFPCGSITGAPKIATMEII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH KDLEPQPRGVYCGTIGLLHPNGRRIFNVAIRTIQLHQGEAIYGVGGGITWDSTWQSEYRE HHCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEEECCCEEEECCCCCCCCCCHHHHHHH VHQKAAVLYRKQARFQLITTGKISQKNLLFEEQHLERLRTASRYFAFPYDAEDLRQKIEA HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH ECQSCDIDQDYRLRISLSKSGEIELSRQILTPLSLHFCQAKLCLQEANLQQAFTYFKTTY HHHHCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RPHLNLGEQEIIYHNKSGELLETSIGNLVLKIAGKLYTPPIRLGILPGIYRQYLLETGQV CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCH EEKVLTLTDFAQAEAIYGCNAVRGLYELSLEEN HHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCC >Mature Secondary Structure MHRKTVIDFRALGERYIFTKPIKELKTRNLTEVADLLAQVESYQEQGYYVVGYVSYEAAP CCCCEEEHHHHCCCCCEECCCHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC AFEEKLAVHKAPLLGEYLLYFTVHDRVETSPIPLTYDEVDLPSNWQEVTSAADYEKAIAQ HHHHHHHHHCCCHHHCEEEEEEEECCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHH IHHHLRQGDTYQVNYTVQLKQDLSANPFAIYNRMVVEQEAGYNAYVEHDDMAVISMSPEL HHHHHHCCCEEEEEEEEEEECCCCCCCHHHHHHHHEECCCCCCEEEECCCEEEEEECCHH FFEQNDRELTTRPMKGTTQRAITDQEDLEQASWLEQDSKNRSENMMIVDLLRNDMNRISE EEECCCCEEECCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHH VGSEHVERLCQVEQYSTVWQMTSTIKSQLRADVDLVTIFRSLFPCGSITGAPKIATMEII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHH KDLEPQPRGVYCGTIGLLHPNGRRIFNVAIRTIQLHQGEAIYGVGGGITWDSTWQSEYRE HHCCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEEECCCEEEECCCCCCCCCCHHHHHHH VHQKAAVLYRKQARFQLITTGKISQKNLLFEEQHLERLRTASRYFAFPYDAEDLRQKIEA HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH ECQSCDIDQDYRLRISLSKSGEIELSRQILTPLSLHFCQAKLCLQEANLQQAFTYFKTTY HHHHCCCCCCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RPHLNLGEQEIIYHNKSGELLETSIGNLVLKIAGKLYTPPIRLGILPGIYRQYLLETGQV CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCH EEKVLTLTDFAQAEAIYGCNAVRGLYELSLEEN HHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2123867; 7584024; 9384377 [H]