| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is cps2E [H]
Identifier: 116516773
GI number: 116516773
Start: 317328
End: 318695
Strand: Direct
Name: cps2E [H]
Synonym: SPD_0319
Alternate gene names: 116516773
Gene position: 317328-318695 (Clockwise)
Preceding gene: 116517023
Following gene: 116516453
Centisome position: 15.51
GC content: 37.79
Gene sequence:
>1368_bases ATGAATGGAAAAACAGTAAAGTCTTCATTGGCCATAATCCAGAGTTTTCTTATTATTTTATTGACTTATCTACTTAGTGC TGTGAGAGAAGCGGAGATTGTTTCAACAACAGCTATTGCACTTTATATCCTCCATTATTTTGTCTTTTATATCAGTGATT ATGGACAAGATTTCTTTAAAAGGGGATATTTGATTGAACTTGTCCAGACATTGAAATATATCCTATTCTTTGCACTAGCG ATTAGTATTTCTAATTTTTTCTTAGAGGATCGATTTAGTATTTCCAGACGAGGCATGATTTACTTCCTCACATTACATGC TCTCTTAGTCTATGTGCTAAACCTATTTATCAAGTGGTATTGGAAGCGGGCTTATCTCAACTTTAAAGGAAGTAAGAAGA TTCTCCTACTTACAGCAACTTCTCGTGTCGAAAAGGTACTGGATAGATTAATAGAATCAAATGAGGTTGTTGGGGAGTTG GTAGCCGTCAGTGTCTTAGATAAATCAGATTTTCAGCATGATTGTTTAAAGGTAGTAGCAGAGGGGGAGATAGTAAACTT TGCGACTCATGAGGTGGTCGATGAAGTCTTTATCAATCTTCCGAGTGAAAAATACAATATTGGAGAGCTTGTCTCTCAGT TTGAAACGATGGGAATTGATGTAACAGTTAATCTAAATGCTTTTGGTTGTAGTTTGGCACGTAACAAGCAAATTCGTGAG ATGGCAGGATTAAACGTTGTGACTTTTTCTACAACATTTTATAAGACTAGTCATGTAATTGCTAAGCGGATTATTGATAT CATGGGTGCATTGGTAGGGCTGATACTATGTGGTTTAGTCAGTATTGTACTGGTTCCTTTGATTCGAAAGGATGGGGGCT CTGCTATTTTTGCTCAGACGCGTATAGGAAAAAATGGTCGTCAGTTCACTTTTTATAAGTTTCGCTCTATGTGTGTAGAT GCCGAGGCGAAAAAAAGAGAACTCATGGAACAAAATACCATGCAGGGTGGAATGTTTAAGGTGGACGATGATCCTCGTAT CACGAAAATTGGTCGTTTTATACGGAAGACTAGCTTGGACGAGCTACCACAGGTTTATAATGTTCTAAAGGGAGATATGA GTTTGGTTGGCACACGGCCACCAACAGTGGACGAGTATGAACACTATACCCCAGAACAAAAACGTCGTCTGAGTTTTAAA CCTGGCATAACAGGCTTATGGCAGGTCAGCGGACGAAGTGAAATCAAAAATTTCGATGAAGTTGTCAAATTAGATGTAGC CTATATAGACGATTGGACAATTTGGAAAGACATTGAAATTTTATTGAAGACAGTTAAAGTAGTATTTATGAGAGATGGAG CGAAGTAG
Upstream 100 bases:
>100_bases CGTTTTTGGGAGTTGTGTTGAATAAATTCGATACTTCAGTAGACAAATACGGTTCTTATGGAGATTACGGGAAAAATAAA AAATAGGTCGGGGGATAGAG
Downstream 100 bases:
>100_bases TTTACTTTTGTTTTAGACTACTAGGAGAAAAATGAAGAAGTCAGTTTATATCATTGGTTCAAAGGGGATTCCTGCCAAGT ATGGAGGATTTGAAACCTTT
Product: undecaprenylphosphate glucosephosphotransferase Cps2E
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MNGKTVKSSLAIIQSFLIILLTYLLSAVREAEIVSTTAIALYILHYFVFYISDYGQDFFKRGYLIELVQTLKYILFFALA ISISNFFLEDRFSISRRGMIYFLTLHALLVYVLNLFIKWYWKRAYLNFKGSKKILLLTATSRVEKVLDRLIESNEVVGEL VAVSVLDKSDFQHDCLKVVAEGEIVNFATHEVVDEVFINLPSEKYNIGELVSQFETMGIDVTVNLNAFGCSLARNKQIRE MAGLNVVTFSTTFYKTSHVIAKRIIDIMGALVGLILCGLVSIVLVPLIRKDGGSAIFAQTRIGKNGRQFTFYKFRSMCVD AEAKKRELMEQNTMQGGMFKVDDDPRITKIGRFIRKTSLDELPQVYNVLKGDMSLVGTRPPTVDEYEHYTPEQKRRLSFK PGITGLWQVSGRSEIKNFDEVVKLDVAYIDDWTIWKDIEILLKTVKVVFMRDGAK
Sequences:
>Translated_455_residues MNGKTVKSSLAIIQSFLIILLTYLLSAVREAEIVSTTAIALYILHYFVFYISDYGQDFFKRGYLIELVQTLKYILFFALA ISISNFFLEDRFSISRRGMIYFLTLHALLVYVLNLFIKWYWKRAYLNFKGSKKILLLTATSRVEKVLDRLIESNEVVGEL VAVSVLDKSDFQHDCLKVVAEGEIVNFATHEVVDEVFINLPSEKYNIGELVSQFETMGIDVTVNLNAFGCSLARNKQIRE MAGLNVVTFSTTFYKTSHVIAKRIIDIMGALVGLILCGLVSIVLVPLIRKDGGSAIFAQTRIGKNGRQFTFYKFRSMCVD AEAKKRELMEQNTMQGGMFKVDDDPRITKIGRFIRKTSLDELPQVYNVLKGDMSLVGTRPPTVDEYEHYTPEQKRRLSFK PGITGLWQVSGRSEIKNFDEVVKLDVAYIDDWTIWKDIEILLKTVKVVFMRDGAK >Mature_455_residues MNGKTVKSSLAIIQSFLIILLTYLLSAVREAEIVSTTAIALYILHYFVFYISDYGQDFFKRGYLIELVQTLKYILFFALA ISISNFFLEDRFSISRRGMIYFLTLHALLVYVLNLFIKWYWKRAYLNFKGSKKILLLTATSRVEKVLDRLIESNEVVGEL VAVSVLDKSDFQHDCLKVVAEGEIVNFATHEVVDEVFINLPSEKYNIGELVSQFETMGIDVTVNLNAFGCSLARNKQIRE MAGLNVVTFSTTFYKTSHVIAKRIIDIMGALVGLILCGLVSIVLVPLIRKDGGSAIFAQTRIGKNGRQFTFYKFRSMCVD AEAKKRELMEQNTMQGGMFKVDDDPRITKIGRFIRKTSLDELPQVYNVLKGDMSLVGTRPPTVDEYEHYTPEQKRRLSFK PGITGLWQVSGRSEIKNFDEVVKLDVAYIDDWTIWKDIEILLKTVKVVFMRDGAK
Specific function: Galactosyl transferase is essential for the assembly of the group B streptococci (GBS) type III capsular polysaccharide. May be involved in the formation of either or both galactosidic bonds by catalyzing the addition of galactose to an oligosaccharide pr
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=228, Percent_Identity=35.5263157894737, Blast_Score=125, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 51960; Mature: 51960
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGKTVKSSLAIIQSFLIILLTYLLSAVREAEIVSTTAIALYILHYFVFYISDYGQDFFK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGYLIELVQTLKYILFFALAISISNFFLEDRFSISRRGMIYFLTLHALLVYVLNLFIKWY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH WKRAYLNFKGSKKILLLTATSRVEKVLDRLIESNEVVGELVAVSVLDKSDFQHDCLKVVA HHHHHEEECCCCEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHH EGEIVNFATHEVVDEVFINLPSEKYNIGELVSQFETMGIDVTVNLNAFGCSLARNKQIRE CCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECCHHCCHHHCCHHHHH MAGLNVVTFSTTFYKTSHVIAKRIIDIMGALVGLILCGLVSIVLVPLIRKDGGSAIFAQT HHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE RIGKNGRQFTFYKFRSMCVDAEAKKRELMEQNTMQGGMFKVDDDPRITKIGRFIRKTSLD ECCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCHH ELPQVYNVLKGDMSLVGTRPPTVDEYEHYTPEQKRRLSFKPGITGLWQVSGRSEIKNFDE HHHHHHHHHHCCHHEECCCCCCCCCHHCCCCHHHHCCCCCCCCCEEEEECCHHHHHHHHH VVKLDVAYIDDWTIWKDIEILLKTVKVVFMRDGAK HHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNGKTVKSSLAIIQSFLIILLTYLLSAVREAEIVSTTAIALYILHYFVFYISDYGQDFFK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGYLIELVQTLKYILFFALAISISNFFLEDRFSISRRGMIYFLTLHALLVYVLNLFIKWY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH WKRAYLNFKGSKKILLLTATSRVEKVLDRLIESNEVVGELVAVSVLDKSDFQHDCLKVVA HHHHHEEECCCCEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHH EGEIVNFATHEVVDEVFINLPSEKYNIGELVSQFETMGIDVTVNLNAFGCSLARNKQIRE CCCEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECCHHCCHHHCCHHHHH MAGLNVVTFSTTFYKTSHVIAKRIIDIMGALVGLILCGLVSIVLVPLIRKDGGSAIFAQT HHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE RIGKNGRQFTFYKFRSMCVDAEAKKRELMEQNTMQGGMFKVDDDPRITKIGRFIRKTSLD ECCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCHH ELPQVYNVLKGDMSLVGTRPPTVDEYEHYTPEQKRRLSFKPGITGLWQVSGRSEIKNFDE HHHHHHHHHHCCHHEECCCCCCCCCHHCCCCHHHHCCCCCCCCCEEEEECCHHHHHHHHH VVKLDVAYIDDWTIWKDIEILLKTVKVVFMRDGAK HHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8355611; 10913080; 11773119; 12354221 [H]