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The map label for this gene is ycdQ [C]

Identifier: 116516685

GI number: 116516685

Start: 98018

End: 99175

Strand: Direct

Name: ycdQ [C]

Synonym: SPD_0098

Alternate gene names: 116516685

Gene position: 98018-99175 (Clockwise)

Preceding gene: 116516138

Following gene: 116517199

Centisome position: 4.79

GC content: 33.33

Gene sequence:

>1158_bases
ATGTCAAGTAAGGTTTCTGGCTTTCAAGATAAAAATGGGAAAGTCTTGAAAATTATGATAGAATGGTGGAAGGAAAAATT
CAGGAGAGTAGTAGTGACTCAAAATGTTGAAAGTCTTCTCGTATCCATTGTAATCAGTGCATACAATGAAGAAAAATATC
TGCCTGGTCTAATTGAAGACTTAAAAAATCAAACCTATCCTAAAGAGGATATTGAAATTCTATTTATAAATGCTATGTCC
ACAGATGGGACCACAGCTATCATTCAGCAATTTATAAAGGAAGATACAGAGTTTAACTCAATTAGATTGTATAACAATCC
TAAGAAAAATCAAGCTAGTGGTTTTAACCTGGGAGTTAAACATTCTGTAGGGGACCTTATTTTAAAAATTGATGCTCATT
CAAAAGTTACTGAGAGTTTTGTAATGAACAATGTGGCTATTATTCAACAAGGTGAATTTGTCTGTGGGGGGCCTAGACCG
ACGATTGTCGAAGGAAAAGGAAAATGGGCAGAGACCTTGCATCTTGTTGAGGAAAATATGTTTGGCAGTAGCATTGCCAA
TTATCGAAATAGTTCCGAGGATAGATATGTTTCTTCTATTTTTCATGGGATGTATAAACGAGAGGTTTTCCAGAAGGTTG
GTTTAGTAAATGAGCAACTTGGCCGAACTGAAGATAATGATATTCATTATAGAATTCGAGAACATGGTTATAAAATCCGC
TATAGCCCAAGTATTCTATCTTATCAGTATATTCGACCAACATTCAAGAAAATGCTGCATCAAAAGTATTCAAATGGTTT
GTGGATTGGCTTGACAAGTCATGTTCAGTTTAAGTGTTTATCATTATTTCACTATGTTCCTTGTTTATTTGTTTTGAGTC
TTGTGTTTAGTCTAGCATTGTTACCGATCACATTCGTATTCATAACTTTACTATTAGGTGCCTATTTTCTACTTTTGTCA
TTACTCACTTTGCTGACTTTATTAAAACATAAAAATGGATTTCTAATTGTGATGCCCTTTCTTTTATTTTCCATTCACTT
TGCTTATGGCCTTGGGACGATTGTAGGTTTAATTAGAGGATTTAAATGGAAGAAGGAGTACAAGGGAACAATAATTTATT
TGGATAAAATAAGCCAAATAAATAAAAATATGCTATAA

Upstream 100 bases:

>100_bases
TCAGGATAATACCTGGAACAAAAAAGAGTGATTGCTTTTTCATATAATACCTCTTCTAGCTGATTTTAATAACAGCTTAT
TTTAAGGCTTTTTCACTATA

Downstream 100 bases:

>100_bases
TAACAATATAGTAAAACTCTTTTAAGGAGGAGTAGATTTCTATGAATAAAAAACTAACAGATTATGTGATTGATCTGGTG
GAAATTTTAAATAAACAACA

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: Succinoglycan Biosynthesis Protein ExoA; Glycosyl Transferase Family Protein; Glycosyltransferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Succinoglycan Biosynthesis Protein; Glycosyl Transferase Group 2 Family Protein; Intercellular Adhesion Protein IcaA Homolog; WblJ Protein; Dolichyl-Phosphate Mannose Synthase Related Protein; Glycosyltransferase-Like Protein; Dolichyl-Phosphate Mannose Synthase-Like Protein; Glucosyltransferase

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MSSKVSGFQDKNGKVLKIMIEWWKEKFRRVVVTQNVESLLVSIVISAYNEEKYLPGLIEDLKNQTYPKEDIEILFINAMS
TDGTTAIIQQFIKEDTEFNSIRLYNNPKKNQASGFNLGVKHSVGDLILKIDAHSKVTESFVMNNVAIIQQGEFVCGGPRP
TIVEGKGKWAETLHLVEENMFGSSIANYRNSSEDRYVSSIFHGMYKREVFQKVGLVNEQLGRTEDNDIHYRIREHGYKIR
YSPSILSYQYIRPTFKKMLHQKYSNGLWIGLTSHVQFKCLSLFHYVPCLFVLSLVFSLALLPITFVFITLLLGAYFLLLS
LLTLLTLLKHKNGFLIVMPFLLFSIHFAYGLGTIVGLIRGFKWKKEYKGTIIYLDKISQINKNML

Sequences:

>Translated_385_residues
MSSKVSGFQDKNGKVLKIMIEWWKEKFRRVVVTQNVESLLVSIVISAYNEEKYLPGLIEDLKNQTYPKEDIEILFINAMS
TDGTTAIIQQFIKEDTEFNSIRLYNNPKKNQASGFNLGVKHSVGDLILKIDAHSKVTESFVMNNVAIIQQGEFVCGGPRP
TIVEGKGKWAETLHLVEENMFGSSIANYRNSSEDRYVSSIFHGMYKREVFQKVGLVNEQLGRTEDNDIHYRIREHGYKIR
YSPSILSYQYIRPTFKKMLHQKYSNGLWIGLTSHVQFKCLSLFHYVPCLFVLSLVFSLALLPITFVFITLLLGAYFLLLS
LLTLLTLLKHKNGFLIVMPFLLFSIHFAYGLGTIVGLIRGFKWKKEYKGTIIYLDKISQINKNML
>Mature_384_residues
SSKVSGFQDKNGKVLKIMIEWWKEKFRRVVVTQNVESLLVSIVISAYNEEKYLPGLIEDLKNQTYPKEDIEILFINAMST
DGTTAIIQQFIKEDTEFNSIRLYNNPKKNQASGFNLGVKHSVGDLILKIDAHSKVTESFVMNNVAIIQQGEFVCGGPRPT
IVEGKGKWAETLHLVEENMFGSSIANYRNSSEDRYVSSIFHGMYKREVFQKVGLVNEQLGRTEDNDIHYRIREHGYKIRY
SPSILSYQYIRPTFKKMLHQKYSNGLWIGLTSHVQFKCLSLFHYVPCLFVLSLVFSLALLPITFVFITLLLGAYFLLLSL
LTLLTLLKHKNGFLIVMPFLLFSIHFAYGLGTIVGLIRGFKWKKEYKGTIIYLDKISQINKNML

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44270; Mature: 44139

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKVSGFQDKNGKVLKIMIEWWKEKFRRVVVTQNVESLLVSIVISAYNEEKYLPGLIED
CCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHH
LKNQTYPKEDIEILFINAMSTDGTTAIIQQFIKEDTEFNSIRLYNNPKKNQASGFNLGVK
HCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
HSVGDLILKIDAHSKVTESFVMNNVAIIQQGEFVCGGPRPTIVEGKGKWAETLHLVEENM
CCCCCEEEEECCCHHHHHHHHHCCEEEEECCCEEECCCCCCEECCCCCHHHHHHHHHHHH
FGSSIANYRNSSEDRYVSSIFHGMYKREVFQKVGLVNEQLGRTEDNDIHYRIREHGYKIR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEHHCCEEEE
YSPSILSYQYIRPTFKKMLHQKYSNGLWIGLTSHVQFKCLSLFHYVPCLFVLSLVFSLAL
ECCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPITFVFITLLLGAYFLLLSLLTLLTLLKHKNGFLIVMPFLLFSIHFAYGLGTIVGLIRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHC
FKWKKEYKGTIIYLDKISQINKNML
CCCHHHHCCEEEEEECHHHHHCCCC
>Mature Secondary Structure 
SSKVSGFQDKNGKVLKIMIEWWKEKFRRVVVTQNVESLLVSIVISAYNEEKYLPGLIED
CCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHH
LKNQTYPKEDIEILFINAMSTDGTTAIIQQFIKEDTEFNSIRLYNNPKKNQASGFNLGVK
HCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC
HSVGDLILKIDAHSKVTESFVMNNVAIIQQGEFVCGGPRPTIVEGKGKWAETLHLVEENM
CCCCCEEEEECCCHHHHHHHHHCCEEEEECCCEEECCCCCCEECCCCCHHHHHHHHHHHH
FGSSIANYRNSSEDRYVSSIFHGMYKREVFQKVGLVNEQLGRTEDNDIHYRIREHGYKIR
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEHHCCEEEE
YSPSILSYQYIRPTFKKMLHQKYSNGLWIGLTSHVQFKCLSLFHYVPCLFVLSLVFSLAL
ECCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPITFVFITLLLGAYFLLLSLLTLLTLLKHKNGFLIVMPFLLFSIHFAYGLGTIVGLIRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHC
FKWKKEYKGTIIYLDKISQINKNML
CCCHHHHCCEEEEEECHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA