| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516138
Identifier: 116516138
GI number: 116516138
Start: 92786
End: 93646
Strand: Direct
Name: 116516138
Synonym: SPD_0092
Alternate gene names: NA
Gene position: 92786-93646 (Clockwise)
Preceding gene: 116517133
Following gene: 116516685
Centisome position: 4.53
GC content: 41.11
Gene sequence:
>861_bases ATGGCAAAAACATTTTTTATTCCAAATAAACAGAGCATTTTAGGAGAACAAGAGATTTTGAATGCCAAGTCGATCTTGGC CTTGCTAGACGGTTTGGAGTCACATAGCTATGATGTAGTCTATCTTCGTCAGCCTCTTAATCGTCTCGAGTATATTGAGT GTGCGATAGTGGGGCAATCACAATTTCTCTTTAAGGTCAGTTATGCTGATGGTCAAAAGGCTTACCGTGTCGATCTTCCT GACCTACTAACAAAGACAGACTGGCAGATTATCAAGTCATTTTTAGATGCTTTGCTTGCTTATACAGGGACTGATATTGA AGGGCTAGATGGTTTTGATTTTGAAGCTTATTTCCAAGCAAGTATTCAAGCCTATCTAGCAGACCCTGTAGCTCGTTTTA CGATTTGCCAAGGAATTTTTAATCCTATTTTCTTTAGTCGTGAGAACTTGAAAAGCTTTTTAGAGGCAGATGGCTTGGCT CAGTTTGAAGCGCGTGTGCGTGCGGTTCAAGAGACAGATGCCTACTTTGCAAGAGTTTCCTTCTATCAGGATGGAGAAGG AAAAGTGCATGGCGTTTACCATTTAGCTCAAGGAGTCAAGACAGTTTTACCGAGAGAACCGTTTGTTCCTGCAGCCTATA TTGAGCAATTGGTGGATAAGGAAGTCCAGTGGGAGATTGACTTGGTTCAAATCACAGGAGATGGCTCTAAACCAGAAGAC TATGAAGCCATCGCCCGCTTGGACTATGCAAAATTCTTAGAGGTATTACCCCCATCTTTTTACCACCAACTAGACGCCAA TCAAATAGAAATACAACCCATCCTAGGACAAGATTTTAAAACATTAGCACAAGAAAAGTAA
Upstream 100 bases:
>100_bases TGTTTTTCTATGCTTTGTACTCAAAAATCTAAAGTTTGTTTTTGTATCTTTCAGGAAAATAAGGTATACTGTATGTAAAC GATTTCAAAGGAGTCCAGTT
Downstream 100 bases:
>100_bases AGCAGAAGCAGGTCAATCGACTTGCTTTTTTGACATAGAAAAAATCCTGCCAAGGATGACAGGATTGAATTTTAAAGAAA GGCCAAGATACGAAGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MAKTFFIPNKQSILGEQEILNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQSQFLFKVSYADGQKAYRVDLP DLLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQASIQAYLADPVARFTICQGIFNPIFFSRENLKSFLEADGLA QFEARVRAVQETDAYFARVSFYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIDLVQITGDGSKPED YEAIARLDYAKFLEVLPPSFYHQLDANQIEIQPILGQDFKTLAQEK
Sequences:
>Translated_286_residues MAKTFFIPNKQSILGEQEILNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQSQFLFKVSYADGQKAYRVDLP DLLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQASIQAYLADPVARFTICQGIFNPIFFSRENLKSFLEADGLA QFEARVRAVQETDAYFARVSFYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIDLVQITGDGSKPED YEAIARLDYAKFLEVLPPSFYHQLDANQIEIQPILGQDFKTLAQEK >Mature_285_residues AKTFFIPNKQSILGEQEILNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQSQFLFKVSYADGQKAYRVDLPD LLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQASIQAYLADPVARFTICQGIFNPIFFSRENLKSFLEADGLAQ FEARVRAVQETDAYFARVSFYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIDLVQITGDGSKPEDY EAIARLDYAKFLEVLPPSFYHQLDANQIEIQPILGQDFKTLAQEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32480; Mature: 32349
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTFFIPNKQSILGEQEILNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQS CCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHEEEEEEECCC QFLFKVSYADGQKAYRVDLPDLLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQA EEEEEEEECCCCCEEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH SIQAYLADPVARFTICQGIFNPIFFSRENLKSFLEADGLAQFEARVRAVQETDAYFARVS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEE FYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIDLVQITGDGSKPED EEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCHH YEAIARLDYAKFLEVLPPSFYHQLDANQIEIQPILGQDFKTLAQEK HHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCCHHHHHHCCC >Mature Secondary Structure AKTFFIPNKQSILGEQEILNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQS CCEEECCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHEEEEEEECCC QFLFKVSYADGQKAYRVDLPDLLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQA EEEEEEEECCCCCEEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH SIQAYLADPVARFTICQGIFNPIFFSRENLKSFLEADGLAQFEARVRAVQETDAYFARVS HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEE FYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIDLVQITGDGSKPED EEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCHH YEAIARLDYAKFLEVLPPSFYHQLDANQIEIQPILGQDFKTLAQEK HHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA