| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
Click here to switch to the map view.
The map label for this gene is 116516631
Identifier: 116516631
GI number: 116516631
Start: 669636
End: 669884
Strand: Direct
Name: 116516631
Synonym: SPD_0651
Alternate gene names: NA
Gene position: 669636-669884 (Clockwise)
Preceding gene: 116516216
Following gene: 116515756
Centisome position: 32.73
GC content: 36.55
Gene sequence:
>249_bases ATGTTTGAAAAAGTCAATCGCTCTGGCTTGATTATCTATCTTTACTATAATCGTGATGCCAAAAAACTGCAGGATTATGG AGATATTACCTATCATTCCAAGAAACATCGTTACTTACAACTCTATGTTCCAACTCAAGAAGTGGAGCAATTGGTCGGAC GCTTGAGCAAGGAAAAATTTATTAAAAAAGTTAGGGTTTGTCATATCCAAGAGTTGGAAACACCCTTTGTGGGCAATCTT TATCGATAG
Upstream 100 bases:
>100_bases GGCCAACAATTCATTGAACTAATGATGATAGAAGGCAAACTCGACTGGGTTTGCTTTTTTTGGTATAATAGGGAGAGATT TCTTAGAAAGAGGATTTATC
Downstream 100 bases:
>100_bases GAAAACGCTATCATCGAAAAAGTTCAAGGAAAACATTGACAATTTTCTGATAATTCGGTATATTCTTAACAGACTATTTA AGAAATAAGGAGACAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MFEKVNRSGLIIYLYYNRDAKKLQDYGDITYHSKKHRYLQLYVPTQEVEQLVGRLSKEKFIKKVRVCHIQELETPFVGNL YR
Sequences:
>Translated_82_residues MFEKVNRSGLIIYLYYNRDAKKLQDYGDITYHSKKHRYLQLYVPTQEVEQLVGRLSKEKFIKKVRVCHIQELETPFVGNL YR >Mature_82_residues MFEKVNRSGLIIYLYYNRDAKKLQDYGDITYHSKKHRYLQLYVPTQEVEQLVGRLSKEKFIKKVRVCHIQELETPFVGNL YR
Specific function: Unknown
COG id: COG4471
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0298 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y651_STRP2 (Q04LF3)
Other databases:
- EMBL: CP000410 - RefSeq: YP_816145.1 - STRING: Q04LF3 - EnsemblBacteria: EBSTRT00000019734 - GeneID: 4441420 - GenomeReviews: CP000410_GR - KEGG: spd:SPD_0651 - eggNOG: COG4471 - GeneTree: EBGT00050000027676 - HOGENOM: HBG694525 - OMA: RVEPSHR - ProtClustDB: PRK02302 - GO: GO:0005737 - HAMAP: MF_01126 - InterPro: IPR016979 - PIRSF: PIRSF031653
Pfam domain/function: PF09902 DUF2129
EC number: NA
Molecular weight: Translated: 9941; Mature: 9941
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEKVNRSGLIIYLYYNRDAKKLQDYGDITYHSKKHRYLQLYVPTQEVEQLVGRLSKEKF CCCCCCCCCEEEEEEECCCHHHHHHCCCCEEECCCCEEEEEEECHHHHHHHHHHHHHHHH IKKVRVCHIQELETPFVGNLYR HHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MFEKVNRSGLIIYLYYNRDAKKLQDYGDITYHSKKHRYLQLYVPTQEVEQLVGRLSKEKF CCCCCCCCCEEEEEEECCCHHHHHHCCCCEEECCCCEEEEEEECHHHHHHHHHHHHHHHH IKKVRVCHIQELETPFVGNLYR HHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA