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The map label for this gene is rgg [H]

Identifier: 116516617

GI number: 116516617

Start: 149499

End: 150362

Strand: Direct

Name: rgg [H]

Synonym: SPD_0144

Alternate gene names: 116516617

Gene position: 149499-150362 (Clockwise)

Preceding gene: 116515340

Following gene: 116516089

Centisome position: 7.31

GC content: 39.35

Gene sequence:

>864_bases
ATGATTGAAAAAATGGAACTGGGGGAATTTTACAAGGAATTACGTTTGGCGAGAAAGCTTAAGCAGACAGATGTGGCTTG
TGAGGGTCTAACAGCTTCTCAGTTGTCCAAGTTTGAACTAGGGCAGTCTATGCTGTCTGCGGATAAGTTGATTCTAGCTA
TCCAAGGTATAAATGTGACCTTTGATGAGTTTGGGCACAAGCTCAACAACTATCAAGAATCTCCACATATGCGAATCGGT
CGAAAGGTTGTGAATCGCTTTGCCCATCAGGATATAGCTGCTTTAGAGCAGCTATTGGAGGAAGTTGATCAAGAACAGAT
GGCGCAGACCTATCGTCGTTTGAATGCCATCGTGATTAAAGATGCCATCCATTCACTAAATAAAAGCTACCCACTAGCAG
AGGAGGATAGCGAGTTTTTGACCACCTATCTCTATGCTATCGAGTCTTGGACCTGGTTTGAACTCTATCTCTTTTGCAAT
ACCATGCCCTTCTTGAGCAATCAAGATCTGATTTTTTTATCAACCTCCTTACTCGAAAAATCCAAAGAATTTAAAGAGTT
AGTACACAATCGATTGTATATGAAGCAAGGACTCTTAAATATCTTATCAGAACTCATGGAGCGAAAACTTTTCTCCTACA
TCCCAATCTTCGAAGCCGAGTTGGAGAGGATGTTACGACCGTATGATGTTTTTGAAAAAGTATCGTGGCAATTTTTAAAG
AAGATGAGTGTCTTTCTTCAAACAAAGGGAAGCAATCAAAAAGAGATTGAACGCTTTATCCAATCTCTGCAGGTATTAGA
AAATCCACAATTAACATCCCTTTTTGAATTGCGTTTTCAGCAATATAAAGAACTTATAGATTAG

Upstream 100 bases:

>100_bases
GTCAGCTTAAGGCTGGCTTTTTCAATCACCAAAGTGTCAGAATGTTTTGACAAATGAACACAAATAATGATATAATATGC
AAAAGCTAGGAGGTGGTAGG

Downstream 100 bases:

>100_bases
TTAAAAATGGAATGACAATAACCCACTCCGAAATAAGTAGGAGTATCAGTTGGATTTTTCTTTTCTTCATCTATTATATT
CCTCCTTGTTAGTAATAACT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MIEKMELGEFYKELRLARKLKQTDVACEGLTASQLSKFELGQSMLSADKLILAIQGINVTFDEFGHKLNNYQESPHMRIG
RKVVNRFAHQDIAALEQLLEEVDQEQMAQTYRRLNAIVIKDAIHSLNKSYPLAEEDSEFLTTYLYAIESWTWFELYLFCN
TMPFLSNQDLIFLSTSLLEKSKEFKELVHNRLYMKQGLLNILSELMERKLFSYIPIFEAELERMLRPYDVFEKVSWQFLK
KMSVFLQTKGSNQKEIERFIQSLQVLENPQLTSLFELRFQQYKELID

Sequences:

>Translated_287_residues
MIEKMELGEFYKELRLARKLKQTDVACEGLTASQLSKFELGQSMLSADKLILAIQGINVTFDEFGHKLNNYQESPHMRIG
RKVVNRFAHQDIAALEQLLEEVDQEQMAQTYRRLNAIVIKDAIHSLNKSYPLAEEDSEFLTTYLYAIESWTWFELYLFCN
TMPFLSNQDLIFLSTSLLEKSKEFKELVHNRLYMKQGLLNILSELMERKLFSYIPIFEAELERMLRPYDVFEKVSWQFLK
KMSVFLQTKGSNQKEIERFIQSLQVLENPQLTSLFELRFQQYKELID
>Mature_287_residues
MIEKMELGEFYKELRLARKLKQTDVACEGLTASQLSKFELGQSMLSADKLILAIQGINVTFDEFGHKLNNYQESPHMRIG
RKVVNRFAHQDIAALEQLLEEVDQEQMAQTYRRLNAIVIKDAIHSLNKSYPLAEEDSEFLTTYLYAIESWTWFELYLFCN
TMPFLSNQDLIFLSTSLLEKSKEFKELVHNRLYMKQGLLNILSELMERKLFSYIPIFEAELERMLRPYDVFEKVSWQFLK
KMSVFLQTKGSNQKEIERFIQSLQVLENPQLTSLFELRFQQYKELID

Specific function: Regulates the expression of glucosyltransferase (gtfG) [H]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR010057 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 33948; Mature: 33948

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKMELGEFYKELRLARKLKQTDVACEGLTASQLSKFELGQSMLSADKLILAIQGINVT
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCC
FDEFGHKLNNYQESPHMRIGRKVVNRFAHQDIAALEQLLEEVDQEQMAQTYRRLNAIVIK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAIHSLNKSYPLAEEDSEFLTTYLYAIESWTWFELYLFCNTMPFLSNQDLIFLSTSLLEK
HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
SKEFKELVHNRLYMKQGLLNILSELMERKLFSYIPIFEAELERMLRPYDVFEKVSWQFLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHH
KMSVFLQTKGSNQKEIERFIQSLQVLENPQLTSLFELRFQQYKELID
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEKMELGEFYKELRLARKLKQTDVACEGLTASQLSKFELGQSMLSADKLILAIQGINVT
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCC
FDEFGHKLNNYQESPHMRIGRKVVNRFAHQDIAALEQLLEEVDQEQMAQTYRRLNAIVIK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAIHSLNKSYPLAEEDSEFLTTYLYAIESWTWFELYLFCNTMPFLSNQDLIFLSTSLLEK
HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
SKEFKELVHNRLYMKQGLLNILSELMERKLFSYIPIFEAELERMLRPYDVFEKVSWQFLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHH
KMSVFLQTKGSNQKEIERFIQSLQVLENPQLTSLFELRFQQYKELID
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1534326 [H]