| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is 116516371
Identifier: 116516371
GI number: 116516371
Start: 105545
End: 107653
Strand: Direct
Name: 116516371
Synonym: SPD_0107
Alternate gene names: NA
Gene position: 105545-107653 (Clockwise)
Preceding gene: 116517179
Following gene: 116516985
Centisome position: 5.16
GC content: 37.89
Gene sequence:
>2109_bases ATGAAAAAAATCAGTCATCTTTGTATGTTACTCCTGCTTCTGTGTACCACTTTTTTTGTTTTTAATGTAAACTATACACG AGAAGTGGTTCGGATTCAAGAAATGGGAAAGACTGTAGATTCTTTGGATTTGTATTTGAAAGATATTAACGAACCTGCAG CGTCTGTTCTTCGATTTTTTGAGGATGTATCAAAGGAGTATAAAGTCTCCATCATCAAAACAGACAGTGGTGATGAGGTG GTCAAGTCTGGTGTTTTTGATAAAGATACCTTCCCCTACCAAGAGTTTGGGATTTCTTCTCTTGATTTTACCACAGATGG TGAAGGAGTCTATAGTAATAAAGAAATTTCCAATAAACTTGGTACGATTCCGACCTTTCTAAAAGCCAAACCTATTCAGC TTATGACTTTTCAAACCTATATCAAGGATACATCTCGTAGTTTAAATGGTCGCTATACGATAACTTCTACACAAGAGATG GACAAGGATAGGATTGTACAGAAATGGAGCGATTTTTTCAAGATAGACCAGGCTACCTTGCTAGAGCCGACCTACAAAAG TGCAGTGGAAGTCATAAATCGAGATTTGCTTTTATCTGCCATTGTTTTTGTCTTGGCTATTTTGCTTCTTGTGTTAGTGA CAGTGTATCAACCGATGATGGAGATGAAAAGAGTTGGGGTACAAAAATTACTTGGTTTTCAAGATAGGGCTGTTTTAGCT GATGTTGTAAAAGGCAACCTTTACCTCCTCCTAGGTGGGGCTCTTGTGATCAATCTAGGCGTGTTTTTCTTGCTTGATTA TAAGCCAAAAGATTTGTTTCCTATGCTGTGGTTGTCTCATTTTTTGCTGTTGCAGCTTTATCTCTTTATCAGTTGGTTGA CTTACCTCTTAATCCAAAAAATGACAATCAGCTCTCTGCTGAAAGGTTTTTCATCTTTCAAATTTGGTCTTATCTTCAAT TATGTGATGAAAATAGGGACAACTATTTTACTGACGGCCTTACTGATTGGGGTGGGCAGAAGTTTAGAACAAGAAAACAA AGAACTTGCTTATCAGCAACAGTGGGTAAGTCAAGGTAATTACCTGACCTTAGAAACCTTCAAACTCAATGATAATCTGT GGCAAGAAGAGCTAGCAGGGTCAGGGAAATCTACAGATTATTTCTATCGATTTTATCAGGATTTGGTAGAAAAAACGCAG GCGGGCTATGTGCAGAGTAGCAGTCTTCCTGTAAAAAATTTTGTCCAATCAGAACAGATTCAGCAATATCAGTTAACAGA TACGGTGGATGTTTACTATGCCAATCGCAATTTTCTAAAGAGCAAGGGATTCAAGCTACCAGATACCGGTATTAAAAAAG TTATTTTGATGCCAGCAAGTACGAAAGGTGAAGAAGATAAAAATCAGCTCTTGGGGAAGTTAATTGCCTTTCATTCGATG AAGTATGAAGAGCAGCAAAAACGAACGATAGAGGAGATGGATGTCGAGATTGCCTATTATGAAGGAGATTGGTCATTTTT CCCATATAGTGATAAGCGAAAGGAAAATCTCTCCAATCCAATTATTAGCTTGGTCAATGATTCTGATATGATGTGGGATG AGAAAGCCTCCCTGTCAACAACTGGCTTAAATAATCCGATTAAAATTGAAAATACGGTTCAACATCAAAAAGAGATTACA GAGTTAGTTGAGAAATTGTCAGATGGAAATTATTTAAAATTTTCATCTATTCAAGCCATTCAACAAGAGAAAGTGGATTC TTATCGAGATGCTGTTCGGAATTTTAACCTACTCTTTGCTTTGTTTGGTCTCCTTAGCATGATGATTTCCTACTTCTTAC TAGTAACAACTTTCTTATTGAAGCGCAGGGATATCATTACCAAGAAGTTTATGGGGTGGAAACTGGTCGATCGCTACCGT CCTCTCCTCGTTCTGCTCTTGCTGGGCTATAGTTTCCCTCTTCTAGTCTTGATTTTCTTTGCCCATGCGTTCTTACCACT TCTACTGTTTGCAGGTTTTACATGTCTGGATATACTATTTGTGCTAGGCTTAGCTTCTAGGATGGAGAAAAGAAGTCTAG TAGAGTTATTGAAAGGGGGCATCTTATGA
Upstream 100 bases:
>100_bases CTTCAAATTCCCACCAACGGGAATGGAATATTTCTATGGATTTTAATTAAAATTCTCCCTCCCCTTTTGGAGAGGGAGTT TCTTCACGGGAGGTATCTCT
Downstream 100 bases:
>100_bases TTGAGTTGAAAAATATTACCAAAACCATTGGGGGAAAAGTGATTTTGGATAACTTATCTCTCAGGATTGATCAGGGGGAT TTGGTAGCTATTGTTGGTAA
Product: membrnae protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 702; Mature: 702
Protein sequence:
>702_residues MKKISHLCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFFEDVSKEYKVSIIKTDSGDEV VKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKLGTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEM DKDRIVQKWSDFFKIDQATLLEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLA DVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQKMTISSLLKGFSSFKFGLIFN YVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGNYLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQ AGYVQSSSLPVKNFVQSEQIQQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMPASTKGEEDKNQLLGKLIAFHSM KYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLSTTGLNNPIKIENTVQHQKEIT ELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFALFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYR PLLVLLLLGYSFPLLVLIFFAHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL
Sequences:
>Translated_702_residues MKKISHLCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFFEDVSKEYKVSIIKTDSGDEV VKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKLGTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEM DKDRIVQKWSDFFKIDQATLLEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLA DVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQKMTISSLLKGFSSFKFGLIFN YVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGNYLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQ AGYVQSSSLPVKNFVQSEQIQQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMPASTKGEEDKNQLLGKLIAFHSM KYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLSTTGLNNPIKIENTVQHQKEIT ELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFALFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYR PLLVLLLLGYSFPLLVLIFFAHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL >Mature_702_residues MKKISHLCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFFEDVSKEYKVSIIKTDSGDEV VKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKLGTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEM DKDRIVQKWSDFFKIDQATLLEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLA DVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQKMTISSLLKGFSSFKFGLIFN YVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGNYLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQ AGYVQSSSLPVKNFVQSEQIQQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMPASTKGEEDKNQLLGKLIAFHSM KYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLSTTGLNNPIKIENTVQHQKEIT ELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFALFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYR PLLVLLLLGYSFPLLVLIFFAHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80766; Mature: 80766
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKISHLCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFF CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHH EDVSKEYKVSIIKTDSGDEVVKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKL HHHCHHHEEEEEEECCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHH GTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEMDKDRIVQKWSDFFKIDQATL CCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHHHHHHCCHHHH LEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH DVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQK HHHCCCEEEEEHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTISSLLKGFSSFKFGLIFNYVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC YLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQAGYVQSSSLPVKNFVQSEQI EEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH QQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMPASTKGEEDKNQLLGKLIAFHSM HHHCCCCCEEEEECCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH KYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLST HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCC TGLNNPIKIENTVQHQKEITELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFA CCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYRPLLVLLLLGYSFPLLVLIFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKISHLCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFF CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHH EDVSKEYKVSIIKTDSGDEVVKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKL HHHCHHHEEEEEEECCCHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHH GTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEMDKDRIVQKWSDFFKIDQATL CCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHCCHHHHHHHHHHHHHCCHHHH LEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH DVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQK HHHCCCEEEEEHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTISSLLKGFSSFKFGLIFNYVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC YLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQAGYVQSSSLPVKNFVQSEQI EEEEEEEECCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH QQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMPASTKGEEDKNQLLGKLIAFHSM HHHCCCCCEEEEECCCHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH KYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLST HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHCCCHHHHHCCCCCCCCCCCCCCCC TGLNNPIKIENTVQHQKEITELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFA CCCCCCEECCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH LFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYRPLLVLLLLGYSFPLLVLIFF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA