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The map label for this gene is 116517179

Identifier: 116517179

GI number: 116517179

Start: 105242

End: 105490

Strand: Direct

Name: 116517179

Synonym: SPD_0106

Alternate gene names: NA

Gene position: 105242-105490 (Clockwise)

Preceding gene: 116516732

Following gene: 116516371

Centisome position: 5.14

GC content: 39.36

Gene sequence:

>249_bases
ATGGTATGTAGTATACTTGCTTCTACAAGTGTTTTGGCAGTATGGGTTGATGGTGGTCAATGGAACTATGGAGTAGGATG
GTCAGGAAATTTTGGTTATTCTGATTATTTACATTCTACTCGCTCTCATACAGCAACTGTTAAAGATGGAAATAAATTCT
CTAAGGATCGTGCAGAAGCTGAGGCATGGGCTCGGGCTTCAATCTTCAAATTCCCACCAACGGGAATGGAATATTTCTAT
GGATTTTAA

Upstream 100 bases:

>100_bases
GGACTACGATACTTGTTGACAAATTACTATAGCTGTTTCTACGGAATAGCTCTCGATAATAGGAGAAATAAATCATGAGA
AAATTGGTGTTGCATCTTTA

Downstream 100 bases:

>100_bases
TTAAAATTCTCCCTCCCCTTTTGGAGAGGGAGTTTCTTCACGGGAGGTATCTCTATGAAAAAAATCAGTCATCTTTGTAT
GTTACTCCTGCTTCTGTGTA

Product: bacteriocin

Products: NA

Alternate protein names: Bacteriocin Lactococcin

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MVCSILASTSVLAVWVDGGQWNYGVGWSGNFGYSDYLHSTRSHTATVKDGNKFSKDRAEAEAWARASIFKFPPTGMEYFY
GF

Sequences:

>Translated_82_residues
MVCSILASTSVLAVWVDGGQWNYGVGWSGNFGYSDYLHSTRSHTATVKDGNKFSKDRAEAEAWARASIFKFPPTGMEYFY
GF
>Mature_82_residues
MVCSILASTSVLAVWVDGGQWNYGVGWSGNFGYSDYLHSTRSHTATVKDGNKFSKDRAEAEAWARASIFKFPPTGMEYFY
GF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9127; Mature: 9127

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCSILASTSVLAVWVDGGQWNYGVGWSGNFGYSDYLHSTRSHTATVKDGNKFSKDRAEA
CEECEECCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCHHHHH
EAWARASIFKFPPTGMEYFYGF
HHHHHCEEEECCCCCCCEECCC
>Mature Secondary Structure
MVCSILASTSVLAVWVDGGQWNYGVGWSGNFGYSDYLHSTRSHTATVKDGNKFSKDRAEA
CEECEECCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCHHHHH
EAWARASIFKFPPTGMEYFYGF
HHHHHCEEEECCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA