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The map label for this gene is ycjP [C]

Identifier: 116516337

GI number: 116516337

Start: 1517856

End: 1518689

Strand: Reverse

Name: ycjP [C]

Synonym: SPD_1500

Alternate gene names: 116516337

Gene position: 1518689-1517856 (Counterclockwise)

Preceding gene: 116515660

Following gene: 116516987

Centisome position: 74.22

GC content: 35.97

Gene sequence:

>834_bases
ATGAAGAAGAAATCCGGTATTTATTTAGATATTCTCTCACATGTACTTTTAGTTGGTGCGACCATCGTTGCAGTTTTCCC
ATTGGTATGGATTATCATATCTTCTGTCAAAGGGAAAGGGGAATTAACTCAGTATCCAACACGATTTTGGCCTGAACAGT
TTACATTAGATTATTTCACTCATGTTATCAACGATTTGCACTTCATTGATAATATTCGAAACAGTTTAATCATTGCCTTG
GCTACAACCCTCATTGCGATTATTATTTCTGCTATGGCAGCCTATGGTATTGTTCGATTCTTTCCTAAATTGGGAGCAAT
CATGTCGAGACTACTCGTCATTACCTACATTTTCCCACCAATTTTGTTAGCAATTCCCTATTCAATTGCCATTGCTAAAG
TTGGGTTAACAAATAGTTTATTTGGCTTGATGATGGTTTATCTATCTTTTAGTGTTCCATATGCAGTTTGGCTCTTAGTT
GGATTTTTCCAAACAGTTCCAATTGGAATTGAAGAAGCGGCTAGAATTGATGGTGCAAATAAATTTGTTACGTTTTATAA
AGTTGTGCTACCGATTGTAGCACCAGGTATTGTAGCAACAGCTATTTATACATTTATCAATGCTTGGAATGAATTTCTGT
ATGCCTTGATTTTGATTAACAATACAGGAAAGATGACAGTAGCAGTAGCCCTTCGTTCACTTAATGGTTCAGAAATACTA
GACTGGGGAGATATGATGGCAGCGTCTGTTATTGTAGTTCTTCCATCAATTATTTTCTTCTCTATCATCCAAAATAAGAT
TGCAAGTGGATTATCAGAAGGATCTGTGAAGTAG

Upstream 100 bases:

>100_bases
GTGCTTCAGCAGTTACAGTATTGCTCTTTATCTTCTTGGTGGCGATTTGCTTTATCTACTTTGCTATCATCAGTAAGTGG
GAAAAGGAGGGTAGAAAATA

Downstream 100 bases:

>100_bases
ACGAAAGAAGGAAAAAAATGAATAAAAGAGGTCTTTATTCAAAACTAGGAATTTCTGTTGTAGGCATTAGTCTTTTAATG
GGAGTCCCCGCTTTGATTCA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKKKSGIYLDILSHVLLVGATIVAVFPLVWIIISSVKGKGELTQYPTRFWPEQFTLDYFTHVINDLHFIDNIRNSLIIAL
ATTLIAIIISAMAAYGIVRFFPKLGAIMSRLLVITYIFPPILLAIPYSIAIAKVGLTNSLFGLMMVYLSFSVPYAVWLLV
GFFQTVPIGIEEAARIDGANKFVTFYKVVLPIVAPGIVATAIYTFINAWNEFLYALILINNTGKMTVAVALRSLNGSEIL
DWGDMMAASVIVVLPSIIFFSIIQNKIASGLSEGSVK

Sequences:

>Translated_277_residues
MKKKSGIYLDILSHVLLVGATIVAVFPLVWIIISSVKGKGELTQYPTRFWPEQFTLDYFTHVINDLHFIDNIRNSLIIAL
ATTLIAIIISAMAAYGIVRFFPKLGAIMSRLLVITYIFPPILLAIPYSIAIAKVGLTNSLFGLMMVYLSFSVPYAVWLLV
GFFQTVPIGIEEAARIDGANKFVTFYKVVLPIVAPGIVATAIYTFINAWNEFLYALILINNTGKMTVAVALRSLNGSEIL
DWGDMMAASVIVVLPSIIFFSIIQNKIASGLSEGSVK
>Mature_277_residues
MKKKSGIYLDILSHVLLVGATIVAVFPLVWIIISSVKGKGELTQYPTRFWPEQFTLDYFTHVINDLHFIDNIRNSLIIAL
ATTLIAIIISAMAAYGIVRFFPKLGAIMSRLLVITYIFPPILLAIPYSIAIAKVGLTNSLFGLMMVYLSFSVPYAVWLLV
GFFQTVPIGIEEAARIDGANKFVTFYKVVLPIVAPGIVATAIYTFINAWNEFLYALILINNTGKMTVAVALRSLNGSEIL
DWGDMMAASVIVVLPSIIFFSIIQNKIASGLSEGSVK

Specific function: May participate in oleandomycin secretion during antibiotic production [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=259, Percent_Identity=30.8880308880309, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1789860, Length=276, Percent_Identity=25.7246376811594, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1790464, Length=211, Percent_Identity=28.9099526066351, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30460; Mature: 30460

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSGIYLDILSHVLLVGATIVAVFPLVWIIISSVKGKGELTQYPTRFWPEQFTLDYFT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHH
HVINDLHFIDNIRNSLIIALATTLIAIIISAMAAYGIVRFFPKLGAIMSRLLVITYIFPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLAIPYSIAIAKVGLTNSLFGLMMVYLSFSVPYAVWLLVGFFQTVPIGIEEAARIDGAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCH
KFVTFYKVVLPIVAPGIVATAIYTFINAWNEFLYALILINNTGKMTVAVALRSLNGSEIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHCCCCCHH
DWGDMMAASVIVVLPSIIFFSIIQNKIASGLSEGSVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKKSGIYLDILSHVLLVGATIVAVFPLVWIIISSVKGKGELTQYPTRFWPEQFTLDYFT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHH
HVINDLHFIDNIRNSLIIALATTLIAIIISAMAAYGIVRFFPKLGAIMSRLLVITYIFPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLAIPYSIAIAKVGLTNSLFGLMMVYLSFSVPYAVWLLVGFFQTVPIGIEEAARIDGAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCH
KFVTFYKVVLPIVAPGIVATAIYTFINAWNEFLYALILINNTGKMTVAVALRSLNGSEIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHCCCCCHH
DWGDMMAASVIVVLPSIIFFSIIQNKIASGLSEGSVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8244027 [H]