| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is bceB [H]
Identifier: 116516245
GI number: 116516245
Start: 821910
End: 823898
Strand: Direct
Name: bceB [H]
Synonym: SPD_0805
Alternate gene names: 116516245
Gene position: 821910-823898 (Clockwise)
Preceding gene: 116515744
Following gene: 116516967
Centisome position: 40.17
GC content: 38.46
Gene sequence:
>1989_bases ATGTTTCGATTAACCAATAAGTTAGCGGTATCGAACTTGATTAAAAACCGCAAACTCTACTATCCTTTTGCGCTGGCTGT TCTCTTGGCAGTCACTGTCACCTATCTCTTTTACTCTCTAACCTTCAATCCTAAGATTGCGGAAATCCGTGGAGGAACAA CCATTCAGGCTACACTTGGATTTGGTATGTTTGTCGTCACCCTTGCGTCAGCCATTATCGTTCTCTATGCCAATAGTTTT GTCATGAAGAACCGTTCCAAGGAACTAGGAATTTATGGCATGTTGGGCTTGGAGAAGCGTCATCTTATCAGTATGACCTT TAAGGAGTTAGTGGTATTTGGGATTCTAACTGTTGGAGCGGGTATCGGTATTGGAGCCTTGTTTGACAAGTTAATTTTCG CTTTCCTGCTCAAACTAATGAAATTGAAGGTTGAGCTGGTTGCTACCTTCCAGACGAAAGTTGTCATTACAGTGCTTGTT GTCTTCGGTTTGATTTTCCTAGGCCTCATGTTCCTGAATGCCCTTCGAATCGCCCGTATGAATGCCCTCCAGCTCTCTCG TGAGAAAGCTAGTGGAGAGAAAAAAGGTCGCTTCCTTCCTCTCCAAACCATTCTTGGTTCCATAAGTTTAGGAATTGGCT ATTATCTTGCCCTTACGGTAAAAGATCCTCTTACAGCCTTAACAACCTTCTTCATAGCTGTTTTACTGGTTATCTTTGGG ACTTATCTCTTGTTTAATGCAGGGATTACCGTTTTCCTCCAAATCTTAAAGAAAAATAAGAAATACTATTACCAACCAAA TAACCTCATATCTGTTTCTAACTTGATTTTCCGTATGAAGAAAAATGCAGTTGGACTAGCCACCATCGCTATCTTGTCAA CAATGGTTTTGGTAACCATGTCAGCAGCGACAAGCATTTTCAATTCCTCAGAAAGCTTTAAAAAAGTTCTAAATCCTCAT GATTTTGGGGTTTCAGGGCAAAATGTTGAAAAAGAAGACTTGGACAAACTCTTGAGCCAGTTTGCAAGTGACAAAGGTTA TAAGATTAAAGAAAAAGAAGTATTTCGTTACACTTACTTTGCTGTTGCGAATCAAGAAGGAACCAAGTTAACTATTTTTG AAAAAGGACAAAACCGTGTCCAACCAAAAACAGTTTTCATGGTATTTGACCAAAAAGATTATGAAAATATGACTGGTCAA AAACTGTCTCTATCAGGAAATGAGGTCGGACTCTTTGCAAAGAATGAGGGAGTTAAAGAACAGAAAGCTCTAACTCTAAA TGATCATCAATTTTCTGTAAAAGAAGAATTTACTAAAGATTTTATTGTCAACCATGTTCCAAATCAGTTTAATATTTTGA CTGCTGATTACAATTACCTTGTTGTACCTGATTTACAAGCCTTTTTGGATCAATTCCCAGATTCGGCTATCTATAATCAG TTTTACGGTGGTATGAATGTAAATGCCAGTGAAGCAGAACAACTCAAGGTCGCTGAGGAGTATGAAAAATACTTACAAAA GTTTAATGCTCAATTAAACACTGAAGGTAACTATGTGTATGGTAGCACTCTAGCAGATGCTAGTGCTCAGATGAGTGCCC TCTTTGGTGGTGTCTTCTTTATCGGTATTTTCTTATCCATTATCTTTATGGTCGGAACCGTTCTGGTCATCTACTACAAA CAAATTTCTGAAGGATATGAAGACCGTGAGCGCTTTATTATCTTGCAGAAAGTCGGTTTAGATCAAAAGCAAATCAAGCA AACCATCAACAAACAGGTTTTAACTGTATTCTTCCTTCCTTTGCTCTTTGCCTTCCTACATCTAGCCTTTGCCTACCATA TGCTTAGTCTGATTTTAAAAGTGATTGGTGTACTGGATACGACTATGATGTTGATTGTGACCTTGTCTATCTGCGCTATC TTCCTCATCGCCTATGTGCTGATTTTCATGATTACTTCAAGAAGTTATCGTAAGATTGTCCAAATGTAA
Upstream 100 bases:
>100_bases ATTCTTTACAATCAAATCTACCGTGGAGAGAAGACAGAACGTCAGATGTTCCAAGAAATCTCTGATACCTTGACTGTCAT GGCAAGCGAGGTGAATTAGT
Downstream 100 bases:
>100_bases AAAAAGATACCTCGACTTCAAAATCGAGGTATTTCTTGTTTTCTAAATGCTGAAAAGTTGTCCGAGCAGGAAGGTAACTC CCATAGTTAAGAGACCAATA
Product: transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 662; Mature: 662
Protein sequence:
>662_residues MFRLTNKLAVSNLIKNRKLYYPFALAVLLAVTVTYLFYSLTFNPKIAEIRGGTTIQATLGFGMFVVTLASAIIVLYANSF VMKNRSKELGIYGMLGLEKRHLISMTFKELVVFGILTVGAGIGIGALFDKLIFAFLLKLMKLKVELVATFQTKVVITVLV VFGLIFLGLMFLNALRIARMNALQLSREKASGEKKGRFLPLQTILGSISLGIGYYLALTVKDPLTALTTFFIAVLLVIFG TYLLFNAGITVFLQILKKNKKYYYQPNNLISVSNLIFRMKKNAVGLATIAILSTMVLVTMSAATSIFNSSESFKKVLNPH DFGVSGQNVEKEDLDKLLSQFASDKGYKIKEKEVFRYTYFAVANQEGTKLTIFEKGQNRVQPKTVFMVFDQKDYENMTGQ KLSLSGNEVGLFAKNEGVKEQKALTLNDHQFSVKEEFTKDFIVNHVPNQFNILTADYNYLVVPDLQAFLDQFPDSAIYNQ FYGGMNVNASEAEQLKVAEEYEKYLQKFNAQLNTEGNYVYGSTLADASAQMSALFGGVFFIGIFLSIIFMVGTVLVIYYK QISEGYEDRERFIILQKVGLDQKQIKQTINKQVLTVFFLPLLFAFLHLAFAYHMLSLILKVIGVLDTTMMLIVTLSICAI FLIAYVLIFMITSRSYRKIVQM
Sequences:
>Translated_662_residues MFRLTNKLAVSNLIKNRKLYYPFALAVLLAVTVTYLFYSLTFNPKIAEIRGGTTIQATLGFGMFVVTLASAIIVLYANSF VMKNRSKELGIYGMLGLEKRHLISMTFKELVVFGILTVGAGIGIGALFDKLIFAFLLKLMKLKVELVATFQTKVVITVLV VFGLIFLGLMFLNALRIARMNALQLSREKASGEKKGRFLPLQTILGSISLGIGYYLALTVKDPLTALTTFFIAVLLVIFG TYLLFNAGITVFLQILKKNKKYYYQPNNLISVSNLIFRMKKNAVGLATIAILSTMVLVTMSAATSIFNSSESFKKVLNPH DFGVSGQNVEKEDLDKLLSQFASDKGYKIKEKEVFRYTYFAVANQEGTKLTIFEKGQNRVQPKTVFMVFDQKDYENMTGQ KLSLSGNEVGLFAKNEGVKEQKALTLNDHQFSVKEEFTKDFIVNHVPNQFNILTADYNYLVVPDLQAFLDQFPDSAIYNQ FYGGMNVNASEAEQLKVAEEYEKYLQKFNAQLNTEGNYVYGSTLADASAQMSALFGGVFFIGIFLSIIFMVGTVLVIYYK QISEGYEDRERFIILQKVGLDQKQIKQTINKQVLTVFFLPLLFAFLHLAFAYHMLSLILKVIGVLDTTMMLIVTLSICAI FLIAYVLIFMITSRSYRKIVQM >Mature_662_residues MFRLTNKLAVSNLIKNRKLYYPFALAVLLAVTVTYLFYSLTFNPKIAEIRGGTTIQATLGFGMFVVTLASAIIVLYANSF VMKNRSKELGIYGMLGLEKRHLISMTFKELVVFGILTVGAGIGIGALFDKLIFAFLLKLMKLKVELVATFQTKVVITVLV VFGLIFLGLMFLNALRIARMNALQLSREKASGEKKGRFLPLQTILGSISLGIGYYLALTVKDPLTALTTFFIAVLLVIFG TYLLFNAGITVFLQILKKNKKYYYQPNNLISVSNLIFRMKKNAVGLATIAILSTMVLVTMSAATSIFNSSESFKKVLNPH DFGVSGQNVEKEDLDKLLSQFASDKGYKIKEKEVFRYTYFAVANQEGTKLTIFEKGQNRVQPKTVFMVFDQKDYENMTGQ KLSLSGNEVGLFAKNEGVKEQKALTLNDHQFSVKEEFTKDFIVNHVPNQFNILTADYNYLVVPDLQAFLDQFPDSAIYNQ FYGGMNVNASEAEQLKVAEEYEKYLQKFNAQLNTEGNYVYGSTLADASAQMSALFGGVFFIGIFLSIIFMVGTVLVIYYK QISEGYEDRERFIILQKVGLDQKQIKQTINKQVLTVFFLPLLFAFLHLAFAYHMLSLILKVIGVLDTTMMLIVTLSICAI FLIAYVLIFMITSRSYRKIVQM
Specific function: Part of the ABC transporter complex BceAB (TC 3.A.1.123.5) involved in bacitracin export [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 74510; Mature: 74510
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRLTNKLAVSNLIKNRKLYYPFALAVLLAVTVTYLFYSLTFNPKIAEIRGGTTIQATLG CCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEHHH FGMFVVTLASAIIVLYANSFVMKNRSKELGIYGMLGLEKRHLISMTFKELVVFGILTVGA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHC GIGIGALFDKLIFAFLLKLMKLKVELVATFQTKVVITVLVVFGLIFLGLMFLNALRIARM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NALQLSREKASGEKKGRFLPLQTILGSISLGIGYYLALTVKDPLTALTTFFIAVLLVIFG HHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHHHH TYLLFNAGITVFLQILKKNKKYYYQPNNLISVSNLIFRMKKNAVGLATIAILSTMVLVTM HHHHHHHHHHHHHHHHHCCCCEEECCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SAATSIFNSSESFKKVLNPHDFGVSGQNVEKEDLDKLLSQFASDKGYKIKEKEVFRYTYF HHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECHHHHHEEEEE AVANQEGTKLTIFEKGQNRVQPKTVFMVFDQKDYENMTGQKLSLSGNEVGLFAKNEGVKE EEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCEEEEEECCCCCCH QKALTLNDHQFSVKEEFTKDFIVNHVPNQFNILTADYNYLVVPDLQAFLDQFPDSAIYNQ HCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCHHHHHHHCCCHHHHHH FYGGMNVNASEAEQLKVAEEYEKYLQKFNAQLNTEGNYVYGSTLADASAQMSALFGGVFF HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHH IGIFLSIIFMVGTVLVIYYKQISEGYEDRERFIILQKVGLDQKQIKQTINKQVLTVFFLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEHHCCCCHHHHHHHHHHHHHHHHHHH LLFAFLHLAFAYHMLSLILKVIGVLDTTMMLIVTLSICAIFLIAYVLIFMITSRSYRKIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH QM CC >Mature Secondary Structure MFRLTNKLAVSNLIKNRKLYYPFALAVLLAVTVTYLFYSLTFNPKIAEIRGGTTIQATLG CCCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEHHH FGMFVVTLASAIIVLYANSFVMKNRSKELGIYGMLGLEKRHLISMTFKELVVFGILTVGA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHC GIGIGALFDKLIFAFLLKLMKLKVELVATFQTKVVITVLVVFGLIFLGLMFLNALRIARM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NALQLSREKASGEKKGRFLPLQTILGSISLGIGYYLALTVKDPLTALTTFFIAVLLVIFG HHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHHHHHH TYLLFNAGITVFLQILKKNKKYYYQPNNLISVSNLIFRMKKNAVGLATIAILSTMVLVTM HHHHHHHHHHHHHHHHHCCCCEEECCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH SAATSIFNSSESFKKVLNPHDFGVSGQNVEKEDLDKLLSQFASDKGYKIKEKEVFRYTYF HHHHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEECHHHHHEEEEE AVANQEGTKLTIFEKGQNRVQPKTVFMVFDQKDYENMTGQKLSLSGNEVGLFAKNEGVKE EEECCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCEEEECCCEEEEEECCCCCCH QKALTLNDHQFSVKEEFTKDFIVNHVPNQFNILTADYNYLVVPDLQAFLDQFPDSAIYNQ HCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEECCCHHHHHHHCCCHHHHHH FYGGMNVNASEAEQLKVAEEYEKYLQKFNAQLNTEGNYVYGSTLADASAQMSALFGGVFF HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHH IGIFLSIIFMVGTVLVIYYKQISEGYEDRERFIILQKVGLDQKQIKQTINKQVLTVFFLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEHHCCCCHHHHHHHHHHHHHHHHHHH LLFAFLHLAFAYHMLSLILKVIGVLDTTMMLIVTLSICAIFLIAYVLIFMITSRSYRKIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH QM CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 14612242; 12890034 [H]