Click here to switch to the map view.

The map label for this gene is cps2B [H]

Identifier: 116516159

GI number: 116516159

Start: 315191

End: 315922

Strand: Direct

Name: cps2B [H]

Synonym: SPD_0316

Alternate gene names: 116516159

Gene position: 315191-315922 (Clockwise)

Preceding gene: 116516963

Following gene: 116517039

Centisome position: 15.4

GC content: 41.53

Gene sequence:

>732_bases
ATGATAGACGTCCATTCGCATATCGTTTTTGATGTAGATGACGGTCCCAAGTCAAGAGAGGAAAGCAAGGCTCTCTTGGC
AGAATCCTACAGGCAGGGGGTGCGAACCATTGTCTCTACCTCTCACCGTCGCAAGGGTATGTTTGAAACTCCGGAAGAGA
AGATAGCAGAAAACTTTCTTCAGGTTCGGGAAATTGCAAAAGAAGTAGCAGATGATTTAGTCATTGCTTACGGGGCTGAA
ATTTACTACACACCAGATGTTCTGGATAAGCTGGGAAAAAAGCGGATTCCGACCCTCAATGATAGTCGTTATGCCTTGAT
AGAATTTAGTATGAACACTCCTTATCGCGATATTCATAGCGCCTTGAGCAAGATCTTGATGTCGGGAATTACTCCAGTCA
TTGCCCACATTGAGCGCTATGATGCTCTTGGAAATAATGAAAAACGCGTTCGAGAACTGATTGATATGGGCTGTTACACG
CAAGTAAATAGTTCACATGTCCTCAAACCAAAACTTTTTGGAGAACGTTATAAATTCATGAAAAAAAGAGCTCAGTATTT
TTTAGAGCAGGATTTGGTTCATGTCATTGCAAGTGATATGCACAATCTAGACGGTAGACCTCCTCATATGGCAGAAGCAT
ATGACCTTGTTACCCAAAAATACGGAGAAGCGAAGGCTCAGGAACTTTTTATAGACAATCCTCGAAAAATTGTAATGGAT
CAACTAATTTAG

Upstream 100 bases:

>100_bases
TATGCAATGCCAGACAGTAACCTCTATGTGATGGAAATAGATGATAGTAGTTTAGCTGTAGTTAAAGCAGCTATACAGGA
TGTGATGGAGGGTAGATGAA

Downstream 100 bases:

>100_bases
GAGAAATGATGAAAGAACAAAACACGATAGAAATCGATGTATTTCAATTATTTAAAACCTTGTGGAAACGCAAGCTAATG
ATTTTATTAGTGGCACTTGT

Product: tyrosine-protein phosphatase CpsB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MIDVHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVADDLVIAYGAE
IYYTPDVLDKLGKKRIPTLNDSRYALIEFSMNTPYRDIHSALSKILMSGITPVIAHIERYDALGNNEKRVRELIDMGCYT
QVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIASDMHNLDGRPPHMAEAYDLVTQKYGEAKAQELFIDNPRKIVMD
QLI

Sequences:

>Translated_243_residues
MIDVHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVADDLVIAYGAE
IYYTPDVLDKLGKKRIPTLNDSRYALIEFSMNTPYRDIHSALSKILMSGITPVIAHIERYDALGNNEKRVRELIDMGCYT
QVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIASDMHNLDGRPPHMAEAYDLVTQKYGEAKAQELFIDNPRKIVMD
QLI
>Mature_243_residues
MIDVHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVADDLVIAYGAE
IYYTPDVLDKLGKKRIPTLNDSRYALIEFSMNTPYRDIHSALSKILMSGITPVIAHIERYDALGNNEKRVRELIDMGCYT
QVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIASDMHNLDGRPPHMAEAYDLVTQKYGEAKAQELFIDNPRKIVMD
QLI

Specific function: Dephosphorylates CpsD. Involved in the regulation of capsular polysaccharide biosynthesis [H]

COG id: COG4464

COG function: function code GM; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsB/CapC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016667
- InterPro:   IPR004013 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 27975; Mature: 27975

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDVHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFL
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
QVREIAKEVADDLVIAYGAEIYYTPDVLDKLGKKRIPTLNDSRYALIEFSMNTPYRDIHS
HHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHH
ALSKILMSGITPVIAHIERYDALGNNEKRVRELIDMGCYTQVNSSHVLKPKLFGERYKFM
HHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
KKRAQYFLEQDLVHVIASDMHNLDGRPPHMAEAYDLVTQKYGEAKAQELFIDNPRKIVMD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
QLI
HCC
>Mature Secondary Structure
MIDVHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFL
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
QVREIAKEVADDLVIAYGAEIYYTPDVLDKLGKKRIPTLNDSRYALIEFSMNTPYRDIHS
HHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHH
ALSKILMSGITPVIAHIERYDALGNNEKRVRELIDMGCYTQVNSSHVLKPKLFGERYKFM
HHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
KKRAQYFLEQDLVHVIASDMHNLDGRPPHMAEAYDLVTQKYGEAKAQELFIDNPRKIVMD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
QLI
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11179285; 11463916 [H]