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The map label for this gene is cps2A [H]

Identifier: 116516963

GI number: 116516963

Start: 313744

End: 315189

Strand: Direct

Name: cps2A [H]

Synonym: SPD_0315

Alternate gene names: 116516963

Gene position: 313744-315189 (Clockwise)

Preceding gene: 116516728

Following gene: 116516159

Centisome position: 15.33

GC content: 38.45

Gene sequence:

>1446_bases
ATGAGTAGACGTTTTAAAAAATCACGTTCACAGAAAGTGAAGCGAAGTGTTAATATAGTTTTGTTGACTATTTATTTATT
GTTAGTTTGTTTTTTATTGTTCTTAATCTTTAAGTACAATATCCTTGCTTTTAGATATCTTAATCTAGTGGTAACTGCGT
TAGTCCTACTAGTTGCCTTGGTAGGGCTACTCTTGATTATCTATAAAAAAGCTGAAAAATTTACTATTTTTCTGTTGGTG
TTCTCTATCCTTGTCAGCTCTGTGTCGCTCTTTGCAGTCCAGCAGTTTGTTGGACTGACCAATCGTTTAAATGCGACTTC
TAATTACTCAGAATATTCGCTCAGTGTCGCTGTTTTAGCAGATAGTGAGATCGAAAATGTTACGCAACTGACGAGTGTGA
CAGCACCGACTGGGACTGATAATGAAAATATTCAAAAACTACTAGCTGATATCAAGTCAAGTCAGAATACCGATTTGACG
GTTAACCAGAGTTCGTCTTACTTGGCAGCTTACAAGAGTTTGATTGCAGGGGAGACTAAGGCCATTGTCCTAAATAGTGT
CTTTGAAAATATCATCGAGTTAGAGTATCCAGACTACGCATCGAAGATAAAGAAGATTTATACCAAGGGATTCACTAAAA
AAGTAGAAGCTCCTAAGACGTCTAAGAATCAGTCTTTCAATATCTATGTTAGTGGAATTGACACCTATGGTCCTATTAGT
TCGGTGTCGCGATCAGATGTCAATATCCTGATGACTGTCAATCGTGATACCAAGAAAATCCTCTTGACCACAACGCCACG
TGATGCCTATGTACCAATCGCAGATGGTGGAAATAATCAAAAAGATAAATTAACCCATGCGGGCATTTATGGAGTTGATT
CGTCCATTCACACCTTAGAAAACCTCTATGGAGTGGATATCAATTACTATGTGCGATTGAACTTCACTTCTTTCTTGAAA
ATGATTGACTTATTGGGAGGGGTAGATGTTCATAATGATCAAGAGTTTTCAGCTCTACATGGGAAGTTCCATTTCCCAGT
AGGGAATGTCCATCTAGACTCTGAGCAAGCTCTAGGTTTTGTACGTGAACGCTACTCACTAGCCGATGGAGACCGTGACC
GCGGGCGCAATCAACAAAAGGTGATTGTGGCTATCCTTCAAAAATTAACGTCAACCGAAGCACTGAAAAATTATAGTACG
ATCATTAATAGCTTGCAAGATTCTATCCAAACAAATGTGCCACTTGAGACTATGATAAATTTGGTCAATGCTCAGTTAGA
AAGTGGAGGAAATTATAAAGTAAATTCTCAAGATTTAAAAGGGACAGGTCGGATGGATCTTCCTTCTTATGCAATGCCAG
ACAGTAACCTCTATGTGATGGAAATAGATGATAGTAGTTTAGCTGTAGTTAAAGCAGCTATACAGGATGTGATGGAGGGT
AGATGA

Upstream 100 bases:

>100_bases
TCTACTAAGATACTTAAAGATGCAGATAGTGAAAAAAGGTGTAGACATTACCGTAAAAAAGTGATATAATCGTAAGATGT
TCAATGTATAGGTGTTAATC

Downstream 100 bases:

>100_bases
AATGATAGACGTCCATTCGCATATCGTTTTTGATGTAGATGACGGTCCCAAGTCAAGAGAGGAAAGCAAGGCTCTCTTGG
CAGAATCCTACAGGCAGGGG

Product: integral membrane regulatory protein Cps2A

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 481; Mature: 480

Protein sequence:

>481_residues
MSRRFKKSRSQKVKRSVNIVLLTIYLLLVCFLLFLIFKYNILAFRYLNLVVTALVLLVALVGLLLIIYKKAEKFTIFLLV
FSILVSSVSLFAVQQFVGLTNRLNATSNYSEYSLSVAVLADSEIENVTQLTSVTAPTGTDNENIQKLLADIKSSQNTDLT
VNQSSSYLAAYKSLIAGETKAIVLNSVFENIIELEYPDYASKIKKIYTKGFTKKVEAPKTSKNQSFNIYVSGIDTYGPIS
SVSRSDVNILMTVNRDTKKILLTTTPRDAYVPIADGGNNQKDKLTHAGIYGVDSSIHTLENLYGVDINYYVRLNFTSFLK
MIDLLGGVDVHNDQEFSALHGKFHFPVGNVHLDSEQALGFVRERYSLADGDRDRGRNQQKVIVAILQKLTSTEALKNYST
IINSLQDSIQTNVPLETMINLVNAQLESGGNYKVNSQDLKGTGRMDLPSYAMPDSNLYVMEIDDSSLAVVKAAIQDVMEG
R

Sequences:

>Translated_481_residues
MSRRFKKSRSQKVKRSVNIVLLTIYLLLVCFLLFLIFKYNILAFRYLNLVVTALVLLVALVGLLLIIYKKAEKFTIFLLV
FSILVSSVSLFAVQQFVGLTNRLNATSNYSEYSLSVAVLADSEIENVTQLTSVTAPTGTDNENIQKLLADIKSSQNTDLT
VNQSSSYLAAYKSLIAGETKAIVLNSVFENIIELEYPDYASKIKKIYTKGFTKKVEAPKTSKNQSFNIYVSGIDTYGPIS
SVSRSDVNILMTVNRDTKKILLTTTPRDAYVPIADGGNNQKDKLTHAGIYGVDSSIHTLENLYGVDINYYVRLNFTSFLK
MIDLLGGVDVHNDQEFSALHGKFHFPVGNVHLDSEQALGFVRERYSLADGDRDRGRNQQKVIVAILQKLTSTEALKNYST
IINSLQDSIQTNVPLETMINLVNAQLESGGNYKVNSQDLKGTGRMDLPSYAMPDSNLYVMEIDDSSLAVVKAAIQDVMEG
R
>Mature_480_residues
SRRFKKSRSQKVKRSVNIVLLTIYLLLVCFLLFLIFKYNILAFRYLNLVVTALVLLVALVGLLLIIYKKAEKFTIFLLVF
SILVSSVSLFAVQQFVGLTNRLNATSNYSEYSLSVAVLADSEIENVTQLTSVTAPTGTDNENIQKLLADIKSSQNTDLTV
NQSSSYLAAYKSLIAGETKAIVLNSVFENIIELEYPDYASKIKKIYTKGFTKKVEAPKTSKNQSFNIYVSGIDTYGPISS
VSRSDVNILMTVNRDTKKILLTTTPRDAYVPIADGGNNQKDKLTHAGIYGVDSSIHTLENLYGVDINYYVRLNFTSFLKM
IDLLGGVDVHNDQEFSALHGKFHFPVGNVHLDSEQALGFVRERYSLADGDRDRGRNQQKVIVAILQKLTSTEALKNYSTI
INSLQDSIQTNVPLETMINLVNAQLESGGNYKVNSQDLKGTGRMDLPSYAMPDSNLYVMEIDDSSLAVVKAAIQDVMEGR

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 53514; Mature: 53383

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRFKKSRSQKVKRSVNIVLLTIYLLLVCFLLFLIFKYNILAFRYLNLVVTALVLLVAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLLLIIYKKAEKFTIFLLVFSILVSSVSLFAVQQFVGLTNRLNATSNYSEYSLSVAVLA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE
DSEIENVTQLTSVTAPTGTDNENIQKLLADIKSSQNTDLTVNQSSSYLAAYKSLIAGETK
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCH
AIVLNSVFENIIELEYPDYASKIKKIYTKGFTKKVEAPKTSKNQSFNIYVSGIDTYGPIS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEECCCCCCCHH
SVSRSDVNILMTVNRDTKKILLTTTPRDAYVPIADGGNNQKDKLTHAGIYGVDSSIHTLE
CCCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCHHHHHCCCEECCCCHHHHHH
NLYGVDINYYVRLNFTSFLKMIDLLGGVDVHNDQEFSALHGKFHFPVGNVHLDSEQALGF
HHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHCCEEECCCCCEEECHHHHHHH
VRERYSLADGDRDRGRNQQKVIVAILQKLTSTEALKNYSTIINSLQDSIQTNVPLETMIN
HHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LVNAQLESGGNYKVNSQDLKGTGRMDLPSYAMPDSNLYVMEIDDSSLAVVKAAIQDVMEG
HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCC
R
C
>Mature Secondary Structure 
SRRFKKSRSQKVKRSVNIVLLTIYLLLVCFLLFLIFKYNILAFRYLNLVVTALVLLVAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLLLIIYKKAEKFTIFLLVFSILVSSVSLFAVQQFVGLTNRLNATSNYSEYSLSVAVLA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEE
DSEIENVTQLTSVTAPTGTDNENIQKLLADIKSSQNTDLTVNQSSSYLAAYKSLIAGETK
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCH
AIVLNSVFENIIELEYPDYASKIKKIYTKGFTKKVEAPKTSKNQSFNIYVSGIDTYGPIS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEEECCCCCCCHH
SVSRSDVNILMTVNRDTKKILLTTTPRDAYVPIADGGNNQKDKLTHAGIYGVDSSIHTLE
CCCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCHHHHHCCCEECCCCHHHHHH
NLYGVDINYYVRLNFTSFLKMIDLLGGVDVHNDQEFSALHGKFHFPVGNVHLDSEQALGF
HHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHCCEEECCCCCEEECHHHHHHH
VRERYSLADGDRDRGRNQQKVIVAILQKLTSTEALKNYSTIINSLQDSIQTNVPLETMIN
HHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LVNAQLESGGNYKVNSQDLKGTGRMDLPSYAMPDSNLYVMEIDDSSLAVVKAAIQDVMEG
HHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12721630 [H]