Definition | Streptococcus pneumoniae D39, complete genome. |
---|---|
Accession | NC_008533 |
Length | 2,046,115 |
Click here to switch to the map view.
The map label for this gene is 116516098
Identifier: 116516098
GI number: 116516098
Start: 402650
End: 403015
Strand: Direct
Name: 116516098
Synonym: SPD_0402
Alternate gene names: NA
Gene position: 402650-403015 (Clockwise)
Preceding gene: 116515847
Following gene: 116516992
Centisome position: 19.68
GC content: 38.8
Gene sequence:
>366_bases ATGACTGTAAAAATTAATACAAAAGATGGTCAAATCGAACTAACAGATGAAGTGATTGCAACCGTCGTAGGTGGAGCAGC AACTGAGATTTTTGGTGTGGTCGGTATGGCTAGTAAAAATGCCCTCAAAGATAATTTCCAAGCCCTGCTAGGTAAGGAAA ATTATTCTAAAGGTGTCGTCGTAAAGGCAGCCGAAGATGGCAGTATTGCAGTTGATGTATATACCGTGTTAAGCTACGGA ACAAAGATTAGTGAAGTGTCAAAAAACATTCAAGAGCGTGTTGCCTTTAGCTTGGAAAACCAGCTTGGAATTACTGCTCA GACTGTAAATGTCTACATTCAAAATATCAAAGTTGTAGGAGAATAA
Upstream 100 bases:
>100_bases GTTTGAAAAATAGAGTAAATATCCGCTGATACATCATTCTGCTTTTACACTTGGGCTGAAATATGATAAAATAGAGTATC AACTAGTTGAGGTAAAAAGG
Downstream 100 bases:
>100_bases CCGTGTCAAAAATTACTACTAGCTTATTTCAAGAAATGGTGCAGGCTGCATCAACTCGCTTGAATAAGCAAGCTGAATAT GTCAATTCATTAAACGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MTVKINTKDGQIELTDEVIATVVGGAATEIFGVVGMASKNALKDNFQALLGKENYSKGVVVKAAEDGSIAVDVYTVLSYG TKISEVSKNIQERVAFSLENQLGITAQTVNVYIQNIKVVGE
Sequences:
>Translated_121_residues MTVKINTKDGQIELTDEVIATVVGGAATEIFGVVGMASKNALKDNFQALLGKENYSKGVVVKAAEDGSIAVDVYTVLSYG TKISEVSKNIQERVAFSLENQLGITAQTVNVYIQNIKVVGE >Mature_120_residues TVKINTKDGQIELTDEVIATVVGGAATEIFGVVGMASKNALKDNFQALLGKENYSKGVVVKAAEDGSIAVDVYTVLSYGT KISEVSKNIQERVAFSLENQLGITAQTVNVYIQNIKVVGE
Specific function: Unknown
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asp23 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005531 [H]
Pfam domain/function: PF03780 DUF322 [H]
EC number: NA
Molecular weight: Translated: 12869; Mature: 12738
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKINTKDGQIELTDEVIATVVGGAATEIFGVVGMASKNALKDNFQALLGKENYSKGVV CEEEEECCCCEEEEHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEE VKAAEDGSIAVDVYTVLSYGTKISEVSKNIQERVAFSLENQLGITAQTVNVYIQNIKVVG EEECCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEEEEEEC E C >Mature Secondary Structure TVKINTKDGQIELTDEVIATVVGGAATEIFGVVGMASKNALKDNFQALLGKENYSKGVV EEEEECCCCEEEEHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEE VKAAEDGSIAVDVYTVLSYGTKISEVSKNIQERVAFSLENQLGITAQTVNVYIQNIKVVG EEECCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHEEEEEEEEEEEC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA