Definition | Streptococcus pneumoniae D39, complete genome. |
---|---|
Accession | NC_008533 |
Length | 2,046,115 |
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The map label for this gene is 116516992
Identifier: 116516992
GI number: 116516992
Start: 403018
End: 404685
Strand: Direct
Name: 116516992
Synonym: SPD_0403
Alternate gene names: NA
Gene position: 403018-404685 (Clockwise)
Preceding gene: 116516098
Following gene: 116516357
Centisome position: 19.7
GC content: 43.47
Gene sequence:
>1668_bases GTGTCAAAAATTACTACTAGCTTATTTCAAGAAATGGTGCAGGCTGCATCAACTCGCTTGAATAAGCAAGCTGAATATGT CAATTCATTAAACGTCTTTCCAGTTCCAGATGGAGATACTGGGACAAATATGGGAATGACCATTGAAAATGGTGCTAAAG AAGTTGCAGACAAGCCAGCTTCTACAGTTGGAGAAGTAGCGAGCATTCTTGCCAAAGGGCTTTTGATGGGTGCGCGTGGG AACTCAGGAGTGATTACATCTCAGCTTTTCCGTGGATTTTCCCAAGCTATCAAGGATAAAGACGAGTTAACAGGTCAAGA CTTGGCTCTGGCCTTCCAATCAGGTGTGGAAGTTGCCTATAAGGCAGTGATGAAACCTGTTGAAGGAACGATTTTGACAG TTTCTCGTGGAGCTGCTATCGGTGCTAAGAAAAAAGCTGAGCAAACAGATGATACTGTTGAAGTCATGCGCGCAGCCTTG GAAGGTGCTAAAACAGCTCTAGCTAAAACACCAGACATGCTTCCAGTATTGAAAGAAGTTGGCGTTGTGGACTCAGGTGG TCAAGGATTGGTCTTCATCTACGAAGGTTTCCTTTCAGCCCTTACTGGCGAATATATTGCATCTGAGGACTTTGTAGCGA CTCCTGCCAACATGAGTGAGATGATCAATGTAGAGCATCATAAGTCTGTAGCTGGTCACGTAGCGACTGAGGACATCACG TTTGGTTACTGTACTGAAATCATGGTAGCTCTTAAGCAAGGTCCAACCTATGCTAAAGATTTTGACTACGATGAATTCCG TAACTACTTGGATGAGCTTGGGGATTCTCTCCTCGTTGTTAACGATGATGAAATTGTCAAAGTCCATGTTCATACAGAAG ATCCAGGACTTGTTATGCAAGAAGGTCTCAAATATGGTAGCTTGGTCAAGGTAAAAGTTGACAATATGCGTAACCAACAC GAAGCACAGGTTGAGAAAGAAGCTACTCAAGTTATCAAGTCGGCTGAAGAAAAAGAGTATGCTTTGATTGCTGTGGTGGC TGGTAAAGGTCTAGCAGATATCTTCTGTTCTCAAGGCGTGGATTATGTTATCGAAGGCGGTCAAACCATGAACCCTTCAA CAGAAGACTTTATCAAGGCTGTTGAACAGGTCAATGCCCGTAACATCATCTTCTTGCCAAACAACAAGAACATCTTCATG GCAGCTCAATCTGCGGCAGAAGTTTTGGAGCAACCAGCAGTAGTGGTAGAGGCTCGCACTCTTCCTCAAGGTATGACAAG TCTTCTTGCCTTTGATCCAAGCAAGTCCATTGAAGAAAATCAAGAGCGTATGACAGCTGCTCTTAGAGATGTCGTTAGCG GAAGCGTCACAACAGCCGTGCGTGATACAACGATCGATGGCTTAGAAATCCATGAAAACGATAATCTAGGTATGGTGGAT GGAAAAATTCTTGTGTCAAACCCTGATATGCACCAAACATTGACTGAAACCTTGAAACATATGTTGGATGAAGACAGTGA AATCGTAACCTTCTATGTCGGTGAAGACGGAAGCGAAGAACTTGCCAATGAAATCGCTCAAGAAATCGTAGAAGAATTCG AAGACGTTGAAGTCGAGATTCACCAAGGTCAACAACCTGTTTACCCATACCTATTTAGTGTGGAATAA
Upstream 100 bases:
>100_bases TTCAAGAGCGTGTTGCCTTTAGCTTGGAAAACCAGCTTGGAATTACTGCTCAGACTGTAAATGTCTACATTCAAAATATC AAAGTTGTAGGAGAATAACC
Downstream 100 bases:
>100_bases GATTAATGAAGGACTGAGAAATCAGTTCTTTTTTCTTTTTTAGTAAATGAAATCGGTATCTTTTTAATAAAAACAAAAAT AACATTCATAAATAAACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MSKITTSLFQEMVQAASTRLNKQAEYVNSLNVFPVPDGDTGTNMGMTIENGAKEVADKPASTVGEVASILAKGLLMGARG NSGVITSQLFRGFSQAIKDKDELTGQDLALAFQSGVEVAYKAVMKPVEGTILTVSRGAAIGAKKKAEQTDDTVEVMRAAL EGAKTALAKTPDMLPVLKEVGVVDSGGQGLVFIYEGFLSALTGEYIASEDFVATPANMSEMINVEHHKSVAGHVATEDIT FGYCTEIMVALKQGPTYAKDFDYDEFRNYLDELGDSLLVVNDDEIVKVHVHTEDPGLVMQEGLKYGSLVKVKVDNMRNQH EAQVEKEATQVIKSAEEKEYALIAVVAGKGLADIFCSQGVDYVIEGGQTMNPSTEDFIKAVEQVNARNIIFLPNNKNIFM AAQSAAEVLEQPAVVVEARTLPQGMTSLLAFDPSKSIEENQERMTAALRDVVSGSVTTAVRDTTIDGLEIHENDNLGMVD GKILVSNPDMHQTLTETLKHMLDEDSEIVTFYVGEDGSEELANEIAQEIVEEFEDVEVEIHQGQQPVYPYLFSVE
Sequences:
>Translated_555_residues MSKITTSLFQEMVQAASTRLNKQAEYVNSLNVFPVPDGDTGTNMGMTIENGAKEVADKPASTVGEVASILAKGLLMGARG NSGVITSQLFRGFSQAIKDKDELTGQDLALAFQSGVEVAYKAVMKPVEGTILTVSRGAAIGAKKKAEQTDDTVEVMRAAL EGAKTALAKTPDMLPVLKEVGVVDSGGQGLVFIYEGFLSALTGEYIASEDFVATPANMSEMINVEHHKSVAGHVATEDIT FGYCTEIMVALKQGPTYAKDFDYDEFRNYLDELGDSLLVVNDDEIVKVHVHTEDPGLVMQEGLKYGSLVKVKVDNMRNQH EAQVEKEATQVIKSAEEKEYALIAVVAGKGLADIFCSQGVDYVIEGGQTMNPSTEDFIKAVEQVNARNIIFLPNNKNIFM AAQSAAEVLEQPAVVVEARTLPQGMTSLLAFDPSKSIEENQERMTAALRDVVSGSVTTAVRDTTIDGLEIHENDNLGMVD GKILVSNPDMHQTLTETLKHMLDEDSEIVTFYVGEDGSEELANEIAQEIVEEFEDVEVEIHQGQQPVYPYLFSVE >Mature_554_residues SKITTSLFQEMVQAASTRLNKQAEYVNSLNVFPVPDGDTGTNMGMTIENGAKEVADKPASTVGEVASILAKGLLMGARGN SGVITSQLFRGFSQAIKDKDELTGQDLALAFQSGVEVAYKAVMKPVEGTILTVSRGAAIGAKKKAEQTDDTVEVMRAALE GAKTALAKTPDMLPVLKEVGVVDSGGQGLVFIYEGFLSALTGEYIASEDFVATPANMSEMINVEHHKSVAGHVATEDITF GYCTEIMVALKQGPTYAKDFDYDEFRNYLDELGDSLLVVNDDEIVKVHVHTEDPGLVMQEGLKYGSLVKVKVDNMRNQHE AQVEKEATQVIKSAEEKEYALIAVVAGKGLADIFCSQGVDYVIEGGQTMNPSTEDFIKAVEQVNARNIIFLPNNKNIFMA AQSAAEVLEQPAVVVEARTLPQGMTSLLAFDPSKSIEENQERMTAALRDVVSGSVTTAVRDTTIDGLEIHENDNLGMVDG KILVSNPDMHQTLTETLKHMLDEDSEIVTFYVGEDGSEELANEIAQEIVEEFEDVEVEIHQGQQPVYPYLFSVE
Specific function: Unknown
COG id: COG1461
COG function: function code R; Predicted kinase related to dihydroxyacetone kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DhaL domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004007 - InterPro: IPR019986 [H]
Pfam domain/function: PF02734 Dak2 [H]
EC number: NA
Molecular weight: Translated: 60200; Mature: 60068
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKITTSLFQEMVQAASTRLNKQAEYVNSLNVFPVPDGDTGTNMGMTIENGAKEVADKPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECCCHHHHHCCCH STVGEVASILAKGLLMGARGNSGVITSQLFRGFSQAIKDKDELTGQDLALAFQSGVEVAY HHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHH KAVMKPVEGTILTVSRGAAIGAKKKAEQTDDTVEVMRAALEGAKTALAKTPDMLPVLKEV HHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC GVVDSGGQGLVFIYEGFLSALTGEYIASEDFVATPANMSEMINVEHHKSVAGHVATEDIT CCCCCCCCCEEEHHHHHHHHHCCCHHCCCCCEECCCCHHHHHCCHHHHHHHCCCCCCCCC FGYCTEIMVALKQGPTYAKDFDYDEFRNYLDELGDSLLVVNDDEIVKVHVHTEDPGLVMQ HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCHHHH EGLKYGSLVKVKVDNMRNQHEAQVEKEATQVIKSAEEKEYALIAVVAGKGLADIFCSQGV HCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHCCC DYVIEGGQTMNPSTEDFIKAVEQVNARNIIFLPNNKNIFMAAQSAAEVLEQPAVVVEART CEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHHCCCEEEEEHH LPQGMTSLLAFDPSKSIEENQERMTAALRDVVSGSVTTAVRDTTIDGLEIHENDNLGMVD CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCEEEECCCCCCEEC GKILVSNPDMHQTLTETLKHMLDEDSEIVTFYVGEDGSEELANEIAQEIVEEFEDVEVEI CEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEE HQGQQPVYPYLFSVE ECCCCCCCCEEEECC >Mature Secondary Structure SKITTSLFQEMVQAASTRLNKQAEYVNSLNVFPVPDGDTGTNMGMTIENGAKEVADKPA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECCCHHHHHCCCH STVGEVASILAKGLLMGARGNSGVITSQLFRGFSQAIKDKDELTGQDLALAFQSGVEVAY HHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHH KAVMKPVEGTILTVSRGAAIGAKKKAEQTDDTVEVMRAALEGAKTALAKTPDMLPVLKEV HHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC GVVDSGGQGLVFIYEGFLSALTGEYIASEDFVATPANMSEMINVEHHKSVAGHVATEDIT CCCCCCCCCEEEHHHHHHHHHCCCHHCCCCCEECCCCHHHHHCCHHHHHHHCCCCCCCCC FGYCTEIMVALKQGPTYAKDFDYDEFRNYLDELGDSLLVVNDDEIVKVHVHTEDPGLVMQ HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCHHHH EGLKYGSLVKVKVDNMRNQHEAQVEKEATQVIKSAEEKEYALIAVVAGKGLADIFCSQGV HCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHCCC DYVIEGGQTMNPSTEDFIKAVEQVNARNIIFLPNNKNIFMAAQSAAEVLEQPAVVVEART CEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHHCCCEEEEEHH LPQGMTSLLAFDPSKSIEENQERMTAALRDVVSGSVTTAVRDTTIDGLEIHENDNLGMVD CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCEEEECCCCCCEEC GKILVSNPDMHQTLTETLKHMLDEDSEIVTFYVGEDGSEELANEIAQEIVEEFEDVEVEI CEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEE HQGQQPVYPYLFSVE ECCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA