Definition | Streptococcus pneumoniae D39, complete genome. |
---|---|
Accession | NC_008533 |
Length | 2,046,115 |
Click here to switch to the map view.
The map label for this gene is 116516096
Identifier: 116516096
GI number: 116516096
Start: 1719267
End: 1719380
Strand: Reverse
Name: 116516096
Synonym: SPD_1723
Alternate gene names: NA
Gene position: 1719380-1719267 (Counterclockwise)
Preceding gene: 116517178
Following gene: 116516021
Centisome position: 84.03
GC content: 34.21
Gene sequence:
>114_bases ATGGAAGACATTGATGAAGATGAATTACTGATTTTTGAGAAAGTTCTCGGTCAACTACAGGCAAATATCAAGGGAATAGG AGGAGAGAATAAAGAAATTAGCCAAAAGAATTAG
Upstream 100 bases:
>100_bases GTCCTGTTGATAAGCGGGCTAAGTTTGTTCGTCTGACGGACAAAGCACGTTCTCAGATGCAACAGGTTAAGGCTTTTTTG AACGCATAGACAAGCAGTTG
Downstream 100 bases:
>100_bases TAGAAAAGAATGGGGGATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGTCTATCTAGAGTTGGAAGTGCCGACCT ATATCTCGAAAATTACGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 37; Mature: 37
Protein sequence:
>37_residues MEDIDEDELLIFEKVLGQLQANIKGIGGENKEISQKN
Sequences:
>Translated_37_residues MEDIDEDELLIFEKVLGQLQANIKGIGGENKEISQKN >Mature_37_residues MEDIDEDELLIFEKVLGQLQANIKGIGGENKEISQKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4160; Mature: 4160
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDIDEDELLIFEKVLGQLQANIKGIGGENKEISQKN CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MEDIDEDELLIFEKVLGQLQANIKGIGGENKEISQKN CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA