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The map label for this gene is yeeN [C]

Identifier: 116517178

GI number: 116517178

Start: 1719860

End: 1720576

Strand: Reverse

Name: yeeN [C]

Synonym: SPD_1725

Alternate gene names: 116517178

Gene position: 1720576-1719860 (Counterclockwise)

Preceding gene: 116515376

Following gene: 116516096

Centisome position: 84.09

GC content: 42.68

Gene sequence:

>717_bases
ATGGGACGTAAATGGGCCAATATCGTAGCCAAGAAAACGGCTAAAGATGGAGCCAACTCTAAAGTATATGCAAAATTTGG
TGTAGAAATCTATGTAGCAGCTAAAAAAGGTGATCCAGATCCAGAATCAAACTCAGCTTTGAAATTCGTTATCGACCGTG
CTAAACAAGCCCAAGTGCCAAAACACATTATCGATAAAGCGATTGATAAAGCCAAAGGAAACACAGACGAAACCTTTACA
GAAGGACGTTACGAAGGTTTTGGGCCAAATGGCTCTATGCTAATTGTGGATACTTTGACTTCTAACGTTAACCGTACAGC
AGCCAATGTCCGTGCAGCCTTTGGTAAAAACGGCGGAAACATGGGCGCTTCAGGTTCTGTTTCTTACCTTTTTGACAACA
AAGGTGTTATTGTATTTGGAGGTGAAGATGCGGACGCAGTCTTTGAGCAATTGCTCGAAGCGGATGTGGATGTGGATGAC
GTAGAAGCACAAGAAGGTACAATCACAGTTTACACAGCGCCAACTGACCTTCACAAGGCTATCGTTGCTCTCCGTGAGTC
TGGTATTGAAGAATTCCAAGTGACTGAATTGGAAATGATTCCTCAGTCAGAAGTGGAATTGTCAGGCGAAGACCTTGAAA
CCTTTGAAAAACTTTACAGCGTTCTTGAAGACGACGAAGACGTCCAAAAGATTTATACGAACGTAGATGGGTTTTAA

Upstream 100 bases:

>100_bases
CCTAGCTTGATTTGCTAATAAAATCCATTTCCTCTAGTGAAAATCAAAAAAACTTGTGTTATAATAAGAAAGATTAAAAT
GTGAAAAAAGGAGATTCCTA

Downstream 100 bases:

>100_bases
TTTAACCTATAGAACATGATCCTAAGTGAGAAAATCACTTGGGATTTTTTTAATCAAGAAAATAGTTCTCATAGAAATTT
AATTATTCTCCAGAGAACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKKGDPDPESNSALKFVIDRAKQAQVPKHIIDKAIDKAKGNTDETFT
EGRYEGFGPNGSMLIVDTLTSNVNRTAANVRAAFGKNGGNMGASGSVSYLFDNKGVIVFGGEDADAVFEQLLEADVDVDD
VEAQEGTITVYTAPTDLHKAIVALRESGIEEFQVTELEMIPQSEVELSGEDLETFEKLYSVLEDDEDVQKIYTNVDGF

Sequences:

>Translated_238_residues
MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKKGDPDPESNSALKFVIDRAKQAQVPKHIIDKAIDKAKGNTDETFT
EGRYEGFGPNGSMLIVDTLTSNVNRTAANVRAAFGKNGGNMGASGSVSYLFDNKGVIVFGGEDADAVFEQLLEADVDVDD
VEAQEGTITVYTAPTDLHKAIVALRESGIEEFQVTELEMIPQSEVELSGEDLETFEKLYSVLEDDEDVQKIYTNVDGF
>Mature_237_residues
GRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKKGDPDPESNSALKFVIDRAKQAQVPKHIIDKAIDKAKGNTDETFTE
GRYEGFGPNGSMLIVDTLTSNVNRTAANVRAAFGKNGGNMGASGSVSYLFDNKGVIVFGGEDADAVFEQLLEADVDVDDV
EAQEGTITVYTAPTDLHKAIVALRESGIEEFQVTELEMIPQSEVELSGEDLETFEKLYSVLEDDEDVQKIYTNVDGF

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=243, Percent_Identity=32.5102880658436, Blast_Score=115, Evalue=3e-26,
Organism=Escherichia coli, GI1788294, Length=235, Percent_Identity=74.8936170212766, Blast_Score=363, Evalue=1e-102,
Organism=Escherichia coli, GI1788171, Length=232, Percent_Identity=38.3620689655172, Blast_Score=158, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6321458, Length=262, Percent_Identity=33.206106870229, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1725_STRP2 (Q04IN9)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_817149.1
- ProteinModelPortal:   Q04IN9
- SMR:   Q04IN9
- STRING:   Q04IN9
- EnsemblBacteria:   EBSTRT00000020503
- GeneID:   4441854
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_1725
- eggNOG:   COG0217
- GeneTree:   EBGT00050000027262
- HOGENOM:   HBG715231
- OMA:   VSHMFDH
- ProtClustDB:   PRK12378
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 25830; Mature: 25699

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKKGDPDPESNSALKFVIDRAKQAQVP
CCCHHHHHHHHHHCCCCCCCEEEEEECEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCC
KHIIDKAIDKAKGNTDETFTEGRYEGFGPNGSMLIVDTLTSNVNRTAANVRAAFGKNGGN
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCC
MGASGSVSYLFDNKGVIVFGGEDADAVFEQLLEADVDVDDVEAQEGTITVYTAPTDLHKA
CCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHH
IVALRESGIEEFQVTELEMIPQSEVELSGEDLETFEKLYSVLEDDEDVQKIYTNVDGF
HHHHHHCCCCHHEEHHHECCCCCCCEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
GRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKKGDPDPESNSALKFVIDRAKQAQVP
CCHHHHHHHHHHCCCCCCCEEEEEECEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCC
KHIIDKAIDKAKGNTDETFTEGRYEGFGPNGSMLIVDTLTSNVNRTAANVRAAFGKNGGN
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCC
MGASGSVSYLFDNKGVIVFGGEDADAVFEQLLEADVDVDDVEAQEGTITVYTAPTDLHKA
CCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHH
IVALRESGIEEFQVTELEMIPQSEVELSGEDLETFEKLYSVLEDDEDVQKIYTNVDGF
HHHHHHCCCCHHEEHHHECCCCCCCEECCCHHHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA