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The map label for this gene is aguA

Identifier: 116516045

GI number: 116516045

Start: 831845

End: 832930

Strand: Direct

Name: aguA

Synonym: SPD_0814

Alternate gene names: 116516045

Gene position: 831845-832930 (Clockwise)

Preceding gene: 116515395

Following gene: 116516894

Centisome position: 40.65

GC content: 44.11

Gene sequence:

>1086_bases
ATGATGGACAGTCCAAAAAAATTAGGCTATCACATGCCAGCAGAGTACGAACCCCATCATGGTACCCTCATGATATGGCC
GATTCGACCAGGATCATGGCCTTTTCAAGGAAAGGCTGCTAAAAGAGCATTTACTCAGATCATCGAGACCATAGCAGAAG
GGGAAAGAGTCTATCTTTTGGTGGAGCAGGCCTATCTATCTGAAGCCCAATCCTATCTTGGAGACAAGGTTGTTTATTTA
GACATTCCCACCAATGATGCCTGGGCGCGTGATACTGGCCCAACCATTCTCGTCAATGATAAAGGTAAGAAATTAGCCGT
GGATTGGGCCTTTAATGCTTGGGGAGGCACCTATGATGGTCTTTATCAAGATTATGAAGAGGATGACCAAGTAGCCAGTC
GTTTTGCTGAGGCCTTGGAAAGGCCTGTCTATGATGCTAAACCTTTTGTACTGGAAGGAGGCGCAATCCATAGCGATGGT
CAAGGAACTATTCTCGTAACTGAAAGTTGCTTGCTTAGTCCTGGTCGCAATCCTAACTTGACTAAAGAGGAGATTGAAAA
CACATTATTAGAAAGTCTTGGTGCTGAAAAAGTTATTTGGCTTCCTTATGGTATTTATCAGGATGAAACCAATGAACACG
TCGATAATGTTGTTGCCTTTGTTGGTCCTGCTGAGGTTGTTTTGGCTTGGACAGATGACGAAAATGATCCCCAGTATGCC
ATGTCAAAAGCAGATCTCGAACTCTTAGAACAGGAAACAGATGCAAAAGGTTGTCACTTCACCATTCATAAATTGCCTAT
CCCTGCAGTTCGACAAGTTGTGACAGAAGAAGATTTGCCAGGCTACATCTATGAAGAAGGAGAAGAAGAGCGATACGCAG
GTGAACGACTAGCAGCTTCCTACGTAAACTTTTATATCGCCAACAAGGCTGTCTTGGTTCCACAGTTTGAGGATGTAAAC
GACCAAGTGGCCTTAGATATCCTCAGCAAGTGTTTCCCAGACCGTAAAGTTGTCGGAATACCAGCCAGAGATATTCTCTT
AGGTGGTGGCAATATCCACTGTATCACCCAACAAATTCCAGAATAG

Upstream 100 bases:

>100_bases
TTAATGGTATTGGATTGCCAAGTCTCTATCTCATGGACGAACAGGGAGACTGTAGCTTACTCAAAGCTTTTGGCTATCAA
GACTTTAAAGGGAGATTATC

Downstream 100 bases:

>100_bases
GAGAAAAAGATGAGAAATGTAAGAGTTGCAACCATTCAGATGCAATGCGCTAAGGATGTGGCAACAAATATCCAAACCGC
AGAGCGTTTAGTACGTCAGG

Product: agmatine deiminase

Products: NA

Alternate protein names: Agmatine iminohydrolase

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MMDSPKKLGYHMPAEYEPHHGTLMIWPIRPGSWPFQGKAAKRAFTQIIETIAEGERVYLLVEQAYLSEAQSYLGDKVVYL
DIPTNDAWARDTGPTILVNDKGKKLAVDWAFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDG
QGTILVTESCLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIYQDETNEHVDNVVAFVGPAEVVLAWTDDENDPQYA
MSKADLELLEQETDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEERYAGERLAASYVNFYIANKAVLVPQFEDVN
DQVALDILSKCFPDRKVVGIPARDILLGGGNIHCITQQIPE

Sequences:

>Translated_361_residues
MMDSPKKLGYHMPAEYEPHHGTLMIWPIRPGSWPFQGKAAKRAFTQIIETIAEGERVYLLVEQAYLSEAQSYLGDKVVYL
DIPTNDAWARDTGPTILVNDKGKKLAVDWAFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDG
QGTILVTESCLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIYQDETNEHVDNVVAFVGPAEVVLAWTDDENDPQYA
MSKADLELLEQETDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEERYAGERLAASYVNFYIANKAVLVPQFEDVN
DQVALDILSKCFPDRKVVGIPARDILLGGGNIHCITQQIPE
>Mature_361_residues
MMDSPKKLGYHMPAEYEPHHGTLMIWPIRPGSWPFQGKAAKRAFTQIIETIAEGERVYLLVEQAYLSEAQSYLGDKVVYL
DIPTNDAWARDTGPTILVNDKGKKLAVDWAFNAWGGTYDGLYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDG
QGTILVTESCLLSPGRNPNLTKEEIENTLLESLGAEKVIWLPYGIYQDETNEHVDNVVAFVGPAEVVLAWTDDENDPQYA
MSKADLELLEQETDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEERYAGERLAASYVNFYIANKAVLVPQFEDVN
DQVALDILSKCFPDRKVVGIPARDILLGGGNIHCITQQIPE

Specific function: Unknown

COG id: COG2957

COG function: function code E; Peptidylarginine deiminase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the agmatine deiminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AGUA_STRP2 (Q04L01)

Other databases:

- EMBL:   CP000410
- RefSeq:   YP_816297.1
- ProteinModelPortal:   Q04L01
- SMR:   Q04L01
- STRING:   Q04L01
- EnsemblBacteria:   EBSTRT00000019460
- GeneID:   4442754
- GenomeReviews:   CP000410_GR
- KEGG:   spd:SPD_0814
- eggNOG:   COG2957
- GeneTree:   EBGT00050000029528
- HOGENOM:   HBG668771
- OMA:   PSNLDNQ
- ProtClustDB:   PRK13551
- HAMAP:   MF_01841
- InterPro:   IPR017754
- InterPro:   IPR007466
- TIGRFAMs:   TIGR03380

Pfam domain/function: PF04371 PAD_porph

EC number: =3.5.3.12

Molecular weight: Translated: 40369; Mature: 40369

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: ACT_SITE 354-354

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDSPKKLGYHMPAEYEPHHGTLMIWPIRPGSWPFQGKAAKRAFTQIIETIAEGERVYLL
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEE
VEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKGKKLAVDWAFNAWGGTYDG
EEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCHHH
LYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNL
HHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCEEECCCCEEEEEEHHHHCCCCCCCCC
TKEEIENTLLESLGAEKVIWLPYGIYQDETNEHVDNVVAFVGPAEVVLAWTDDENDPQYA
CHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHEEEECCEEEEEEECCCCCCHHHH
MSKADLELLEQETDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEERYAGERLAAS
HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHH
YVNFYIANKAVLVPQFEDVNDQVALDILSKCFPDRKVVGIPARDILLGGGNIHCITQQIP
HHHEEEECCEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCHHHEEEECCCEEEEECCCC
E
C
>Mature Secondary Structure
MMDSPKKLGYHMPAEYEPHHGTLMIWPIRPGSWPFQGKAAKRAFTQIIETIAEGERVYLL
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEE
VEQAYLSEAQSYLGDKVVYLDIPTNDAWARDTGPTILVNDKGKKLAVDWAFNAWGGTYDG
EEHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCHHH
LYQDYEEDDQVASRFAEALERPVYDAKPFVLEGGAIHSDGQGTILVTESCLLSPGRNPNL
HHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCEEECCCCEEEEEEHHHHCCCCCCCCC
TKEEIENTLLESLGAEKVIWLPYGIYQDETNEHVDNVVAFVGPAEVVLAWTDDENDPQYA
CHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHEEEECCEEEEEEECCCCCCHHHH
MSKADLELLEQETDAKGCHFTIHKLPIPAVRQVVTEEDLPGYIYEEGEEERYAGERLAAS
HHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHH
YVNFYIANKAVLVPQFEDVNDQVALDILSKCFPDRKVVGIPARDILLGGGNIHCITQQIP
HHHEEEECCEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCHHHEEEECCCEEEEECCCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA