Click here to switch to the map view.

The map label for this gene is pepT [H]

Identifier: 116515861

GI number: 116515861

Start: 908262

End: 909482

Strand: Reverse

Name: pepT [H]

Synonym: SPD_0894

Alternate gene names: 116515861

Gene position: 909482-908262 (Counterclockwise)

Preceding gene: 116516166

Following gene: 116517017

Centisome position: 44.45

GC content: 42.34

Gene sequence:

>1221_bases
ATGACTTATCCAAATCTCTTGGACCGCTTCTTAACCTACGTTAAGGTCAACACGCGCTCTGATGAACACTCTACTACTAC
TCCAAGTACACAGAGTCAGGTTGACTTCGCAACAAATGTCCTAATTCCTGAAATGAAACGTGTTGGACTGCAAAATGTTT
ACTATCTACCGAATGGTTTTGCTATTGGAACCTTGCCAGCCAACGATCCGTCTTTAACACGTAAGATTGGTTTTATATCG
CACATGGATACTGCTGATTTTAATGCTGAAGGAGTCAATCCACAGGTAATTGAAAACTACGATGGTTGTGTGATTGAACT
AGGGAATTCTGGTTTCAAACTCGATCCAGCTGACTTCAAGAGTCTTGAAAAATATCCAGGACAAACGCTCATCACAACAG
ATGGAACAACCTTGCTAGGTGCTGATGACAAGTCAGGAATTGCTGAAATTATGACAGCCATTGAATATCTAACTGCTCAT
CCTGAAATTAAGCACTGTGAGATTCGTGTTGGTTTTGGTCCAGATGAAGAAATCGGTGTTGGTGCCAATAAATTTGATGC
AGAAGATTTTGATGTGGATTTTGCCTACACTGTTGATGGTGGTCCACTAGGTGAACTTCAGTACGAGACTTTCTCAGCCG
CTGGTGCTGAATTGCATTTCCAAGGCCGTAATGTCCACCCTGGTACTGCCAAAGGGCAGATGGTCAATGCCCTTCAGCTA
GCAATTGATTTTCATAATCAACTTCCAGAAAATGACCGACCTGAGTTAACTGAAGGTTACCAAGGTTTTTACCATCTAAT
GGATGTGACAGGTAGTGTTGAGGAGGCGCGTGCAAGCTACATCATTCGTGATTTTGAAAAAGATGCCTTTGAAGCGCGTA
AAGCATCCATGCAATCTATCGCTGATAAGATGAATGAAGAACTTGGGAGCAACCGTGTCACTCTCAACTTGACAGACCAG
TACTACAATATGAAAGAAGTCATTGAAAAAGATATGACTCCAATTACCATTGCTAAAGCCGTTATGGAAGATCTAGGTAT
CACGCCTATTATCGAACCAATCCGAGGTGGAACAGACGGCTCTAAGATTTCCTTTATGGGAATCCCAACTCCGAATATCT
TTGCAGGTGGCGAAAATATGCACGGACGTTTTGAATACGTTAGCCTTCAGACTATGGAACGTGCAGTTGATACCATCATT
GGCATCGTACGTAGCTTATAA

Upstream 100 bases:

>100_bases
AAGTAAACGCTAACATAGGGACATTCTCAATCTTCTGTCTTTTGTTTTTCTCTTCTTTCTATGATACAATGGAAAAAATA
AATTCAAAAGGAGTTTTTTT

Downstream 100 bases:

>100_bases
AAGCTAAAAAGACGAGGTAGCTCAGCTACTTCGCCTTTCTTTTTATTCTACTGGTTTTTCTTGATTTCCAGTAGTTGTAG
AAGATTCTGTTGTTTTATTT

Product: peptidase T

Products: NA

Alternate protein names: Aminotripeptidase; Tripeptidase; Tripeptide aminopeptidase [H]

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MTYPNLLDRFLTYVKVNTRSDEHSTTTPSTQSQVDFATNVLIPEMKRVGLQNVYYLPNGFAIGTLPANDPSLTRKIGFIS
HMDTADFNAEGVNPQVIENYDGCVIELGNSGFKLDPADFKSLEKYPGQTLITTDGTTLLGADDKSGIAEIMTAIEYLTAH
PEIKHCEIRVGFGPDEEIGVGANKFDAEDFDVDFAYTVDGGPLGELQYETFSAAGAELHFQGRNVHPGTAKGQMVNALQL
AIDFHNQLPENDRPELTEGYQGFYHLMDVTGSVEEARASYIIRDFEKDAFEARKASMQSIADKMNEELGSNRVTLNLTDQ
YYNMKEVIEKDMTPITIAKAVMEDLGITPIIEPIRGGTDGSKISFMGIPTPNIFAGGENMHGRFEYVSLQTMERAVDTII
GIVRSL

Sequences:

>Translated_406_residues
MTYPNLLDRFLTYVKVNTRSDEHSTTTPSTQSQVDFATNVLIPEMKRVGLQNVYYLPNGFAIGTLPANDPSLTRKIGFIS
HMDTADFNAEGVNPQVIENYDGCVIELGNSGFKLDPADFKSLEKYPGQTLITTDGTTLLGADDKSGIAEIMTAIEYLTAH
PEIKHCEIRVGFGPDEEIGVGANKFDAEDFDVDFAYTVDGGPLGELQYETFSAAGAELHFQGRNVHPGTAKGQMVNALQL
AIDFHNQLPENDRPELTEGYQGFYHLMDVTGSVEEARASYIIRDFEKDAFEARKASMQSIADKMNEELGSNRVTLNLTDQ
YYNMKEVIEKDMTPITIAKAVMEDLGITPIIEPIRGGTDGSKISFMGIPTPNIFAGGENMHGRFEYVSLQTMERAVDTII
GIVRSL
>Mature_405_residues
TYPNLLDRFLTYVKVNTRSDEHSTTTPSTQSQVDFATNVLIPEMKRVGLQNVYYLPNGFAIGTLPANDPSLTRKIGFISH
MDTADFNAEGVNPQVIENYDGCVIELGNSGFKLDPADFKSLEKYPGQTLITTDGTTLLGADDKSGIAEIMTAIEYLTAHP
EIKHCEIRVGFGPDEEIGVGANKFDAEDFDVDFAYTVDGGPLGELQYETFSAAGAELHFQGRNVHPGTAKGQMVNALQLA
IDFHNQLPENDRPELTEGYQGFYHLMDVTGSVEEARASYIIRDFEKDAFEARKASMQSIADKMNEELGSNRVTLNLTDQY
YNMKEVIEKDMTPITIAKAVMEDLGITPIIEPIRGGTDGSKISFMGIPTPNIFAGGENMHGRFEYVSLQTMERAVDTIIG
IVRSL

Specific function: Cleaves the N-terminal amino acid of tripeptides [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20B family [H]

Homologues:

Organism=Escherichia coli, GI1787372, Length=400, Percent_Identity=49.75, Blast_Score=380, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR002933
- InterPro:   IPR011650
- InterPro:   IPR010161 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.4.11.4 [H]

Molecular weight: Translated: 44772; Mature: 44641

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00758 ARGE_DAPE_CPG2_1 ; PS00759 ARGE_DAPE_CPG2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYPNLLDRFLTYVKVNTRSDEHSTTTPSTQSQVDFATNVLIPEMKRVGLQNVYYLPNGF
CCCHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCE
AIGTLPANDPSLTRKIGFISHMDTADFNAEGVNPQVIENYDGCVIELGNSGFKLDPADFK
EEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHEECCCCEEEEECCCCCEECHHHHH
SLEKYPGQTLITTDGTTLLGADDKSGIAEIMTAIEYLTAHPEIKHCEIRVGFGPDEEIGV
HHHHCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
GANKFDAEDFDVDFAYTVDGGPLGELQYETFSAAGAELHFQGRNVHPGTAKGQMVNALQL
CCCCCCCCCCCEEEEEEECCCCCCCEEEHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHH
AIDFHNQLPENDRPELTEGYQGFYHLMDVTGSVEEARASYIIRDFEKDAFEARKASMQSI
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADKMNEELGSNRVTLNLTDQYYNMKEVIEKDMTPITIAKAVMEDLGITPIIEPIRGGTDG
HHHHHHHHCCCEEEEEECHHHCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHCCCCCC
SKISFMGIPTPNIFAGGENMHGRFEYVSLQTMERAVDTIIGIVRSL
CEEEEEECCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TYPNLLDRFLTYVKVNTRSDEHSTTTPSTQSQVDFATNVLIPEMKRVGLQNVYYLPNGF
CCHHHHHHHHHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCE
AIGTLPANDPSLTRKIGFISHMDTADFNAEGVNPQVIENYDGCVIELGNSGFKLDPADFK
EEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHEECCCCEEEEECCCCCEECHHHHH
SLEKYPGQTLITTDGTTLLGADDKSGIAEIMTAIEYLTAHPEIKHCEIRVGFGPDEEIGV
HHHHCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
GANKFDAEDFDVDFAYTVDGGPLGELQYETFSAAGAELHFQGRNVHPGTAKGQMVNALQL
CCCCCCCCCCCEEEEEEECCCCCCCEEEHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHH
AIDFHNQLPENDRPELTEGYQGFYHLMDVTGSVEEARASYIIRDFEKDAFEARKASMQSI
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADKMNEELGSNRVTLNLTDQYYNMKEVIEKDMTPITIAKAVMEDLGITPIIEPIRGGTDG
HHHHHHHHCCCEEEEEECHHHCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHCCCCCC
SKISFMGIPTPNIFAGGENMHGRFEYVSLQTMERAVDTIIGIVRSL
CEEEEEECCCCCEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA