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The map label for this gene is 116517017

Identifier: 116517017

GI number: 116517017

Start: 886953

End: 887753

Strand: Reverse

Name: 116517017

Synonym: SPD_0873

Alternate gene names: NA

Gene position: 887753-886953 (Counterclockwise)

Preceding gene: 116515861

Following gene: 116516986

Centisome position: 43.39

GC content: 38.08

Gene sequence:

>801_bases
ATGAGAAAACAAATTCATCCACTTATTTTATTTAGTTTTTTTGGGATTATGATGTTCATTTTAATCATCAATCGCCCACT
TAATGACAGCCAATCGTTTAAAACAAAATCCAATATAGCACAGATTGAAGCACAGGCTTTGAAACACTTAGACAAACCGA
TTATTGACCTCTCTGGCTGGCAGCGTCCTGAGGAAATCAACTACGATGCCCTCTCACAAAATATTTCAGGTGCTATTGTT
CGTGTTCACAGTGGTACTCAAACAACAAAAGAAAATGATGCTTCATTTATCAATGGAATAGACAAGGCCTATAAGAGTCA
TATCACTGAACTTCAAAAGCGGAATGTCCCAGTTGCTGTCTACGCTTATGTAGCTGGAAAAAGTGTCCAAGAAATGGAAA
AGGCTGCCGAAGTTTTCTACAATGCTGCCTCTCCTTACAGCCCTAGTTACTATTGGCTTGACGTGGAAGACAAAACCATG
TCTAATATGAACGAAGGTGTCGAAAACTTTCGAGCAAAACTAGCATCACTAGGTGCTAAAAACATCGGCATCTACGTTGG
TGTCTACTTCATGGAAGAACACAGTATTGATACAGGCAAGTTTACCTCTGTTTGGATTCCATCCTACGGCTCAGACTCAG
GATTTTTGGAGAGCAGTCCTAAAACTGATTTAGATTATGATATTCACCAATACACATCTAAAGGAAAAATTGCCGGCTTT
GACCACGATTTAGATATCAACGTTATCTCTCCCTTAAAAAATAAAGAAGAAACCTTTCGAAAACTTTTTTTAAAACCTTA
A

Upstream 100 bases:

>100_bases
TTCAAATCATTCCGCACTCTTGAATGAAAAAATGCTCTAAAGTCTCTTCCTTAACCCATTTTTTTGATTTTTTTTGATTT
TTAGGGTAGAATTATAAGAT

Downstream 100 bases:

>100_bases
AAGCATTTGTTTATCATTTGCTTTTTCTTTTTGTGTCTGATTGTGATACAATATAGTAAGGATTTTTTGAAATAGAAATA
GTTGGAGGAAATATATGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; N-Acetylmuramoyl-L-Alanine Amidase; Glycosyl Hydrolases Family Protein; Phage Lysin; Glycosyl Hydrolase Family; Prophage; U32 Family Peptidase; Glycoside Hydrolase Family; Peptidase; Glycosyl Hydrolases Family; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGWQRPEEINYDALSQNISGAIV
RVHSGTQTTKENDASFINGIDKAYKSHITELQKRNVPVAVYAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTM
SNMNEGVENFRAKLASLGAKNIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF
DHDLDINVISPLKNKEETFRKLFLKP

Sequences:

>Translated_266_residues
MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGWQRPEEINYDALSQNISGAIV
RVHSGTQTTKENDASFINGIDKAYKSHITELQKRNVPVAVYAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTM
SNMNEGVENFRAKLASLGAKNIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF
DHDLDINVISPLKNKEETFRKLFLKP
>Mature_266_residues
MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGWQRPEEINYDALSQNISGAIV
RVHSGTQTTKENDASFINGIDKAYKSHITELQKRNVPVAVYAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTM
SNMNEGVENFRAKLASLGAKNIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF
DHDLDINVISPLKNKEETFRKLFLKP

Specific function: Unknown

COG id: COG3757

COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30083; Mature: 30083

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGW
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
QRPEEINYDALSQNISGAIVRVHSGTQTTKENDASFINGIDKAYKSHITELQKRNVPVAV
CCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
YAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTMSNMNEGVENFRAKLASLGAK
EEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC
NIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF
CCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEECC
DHDLDINVISPLKNKEETFRKLFLKP
CCCCCEEEECCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MRKQIHPLILFSFFGIMMFILIINRPLNDSQSFKTKSNIAQIEAQALKHLDKPIIDLSGW
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
QRPEEINYDALSQNISGAIVRVHSGTQTTKENDASFINGIDKAYKSHITELQKRNVPVAV
CCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
YAYVAGKSVQEMEKAAEVFYNAASPYSPSYYWLDVEDKTMSNMNEGVENFRAKLASLGAK
EEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC
NIGIYVGVYFMEEHSIDTGKFTSVWIPSYGSDSGFLESSPKTDLDYDIHQYTSKGKIAGF
CCEEEEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEECC
DHDLDINVISPLKNKEETFRKLFLKP
CCCCCEEEECCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA