| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is yufP [H]
Identifier: 116515653
GI number: 116515653
Start: 753149
End: 754207
Strand: Direct
Name: yufP [H]
Synonym: SPD_0741
Alternate gene names: 116515653
Gene position: 753149-754207 (Clockwise)
Preceding gene: 116515854
Following gene: 116516674
Centisome position: 36.81
GC content: 44.48
Gene sequence:
>1059_bases ATGTCTAAAAAATTACAACAAATTTCGGTTCCCTTGATTTCTGTATTCCTAGGAATTTTACTCGGAGCCATTGTCATGTG GATCTTCGGTTATGATGCTATTTGGGGCTACGAAGAATTGTTCTATACAGCCTTTGGCAGTCTGCGTGGGATTGGAGAAA TCTTCCGTGCTATGGGTCCTCTGGTCTTGATTGGTCTTGGTTTTGCGGTTGCCAGTCGAGCTGGTTTCTTTAACGTCGGA CTTCCTGGTCAGGCTTTGGCAGGTTGGATTCTCAGTGGTTGGTTTGCCCTGTCGCATCCAGATATGCCCCGTCCCTTGAT GATTCTAGCAACCATCGTGATTGCCTTGATTGCTGGTGGGATTGTCGGAGCGATTCCAGGTATTCTTAGGGCCTATCTAG GGACGTCAGAGGTTATTGTAACCATCATGATGAACTACATTATCTTGTATGTAGGGAATGCCTTTATCCATGCTTTCCCT AAAGACTTCATGCAAAGTACAGATTCGACCATTCGTGTTGGGGCTAATGCAACCTATCAGACACCTTGGTTGACTGAGTT GACTGGTAACTCACGGATGAATATTGGTATTTTCTTTGCCATCATTGCCGTTGCAGTTATTTGGTTCATGCTCAAGAAAA CAACTCTTGGTTTTGAAATCCGTGCAGTTGGTCTTAATCCACATGCTTCAGAATATGCTGGTATTTCTGCCAAGCGGACT ATTATCCTATCTATGATTATTTCAGGTGCCTTGGCAGGTCTTGGTGGAGCTGTTGAAGGTTTGGGAACCTTCCAGAACGT CTATGTTCAAGGTTCGTCATTAGCTATCGGATTTAACGGAATGGCGGTTAGTTTGCTTGCGGCCAACTCACCAATTGGTA TACTCTTTGCAGCCTTCCTATTTGGCGTTCTCCAAGTTGGGGCTCCTGGTATGAATGCGGCGCAGGTACCATCTGAGCTT GTCAGCATTGTAACAGCGTCTATTATCTTCTTTGTCAGTGTTCATTACCTTATCGAACGCTTTGTCAAACCGAAAAAACA AGTTAAAGGAGGTAAGTAA
Upstream 100 bases:
>100_bases CACGATGGTAAGATTCAAGGTATTGTATCACCAGAAACAACCAATAAACAAGGACTTGGTGTCTTGATGGCTGGTGGAAA CTTGGGAAAGGAGAAGAGTG
Downstream 100 bases:
>100_bases AGATGTCTATTATAACCTTGCTCCCCCTCTTGGTGTCTTCTATGCTGATTTACTCAGCACCTCTCATCTTTACAAGTATC GGTGGTGTTTTCTCTGAACG
Product: sugar ABC transporter permease
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSKKLQQISVPLISVFLGILLGAIVMWIFGYDAIWGYEELFYTAFGSLRGIGEIFRAMGPLVLIGLGFAVASRAGFFNVG LPGQALAGWILSGWFALSHPDMPRPLMILATIVIALIAGGIVGAIPGILRAYLGTSEVIVTIMMNYIILYVGNAFIHAFP KDFMQSTDSTIRVGANATYQTPWLTELTGNSRMNIGIFFAIIAVAVIWFMLKKTTLGFEIRAVGLNPHASEYAGISAKRT IILSMIISGALAGLGGAVEGLGTFQNVYVQGSSLAIGFNGMAVSLLAANSPIGILFAAFLFGVLQVGAPGMNAAQVPSEL VSIVTASIIFFVSVHYLIERFVKPKKQVKGGK
Sequences:
>Translated_352_residues MSKKLQQISVPLISVFLGILLGAIVMWIFGYDAIWGYEELFYTAFGSLRGIGEIFRAMGPLVLIGLGFAVASRAGFFNVG LPGQALAGWILSGWFALSHPDMPRPLMILATIVIALIAGGIVGAIPGILRAYLGTSEVIVTIMMNYIILYVGNAFIHAFP KDFMQSTDSTIRVGANATYQTPWLTELTGNSRMNIGIFFAIIAVAVIWFMLKKTTLGFEIRAVGLNPHASEYAGISAKRT IILSMIISGALAGLGGAVEGLGTFQNVYVQGSSLAIGFNGMAVSLLAANSPIGILFAAFLFGVLQVGAPGMNAAQVPSEL VSIVTASIIFFVSVHYLIERFVKPKKQVKGGK >Mature_351_residues SKKLQQISVPLISVFLGILLGAIVMWIFGYDAIWGYEELFYTAFGSLRGIGEIFRAMGPLVLIGLGFAVASRAGFFNVGL PGQALAGWILSGWFALSHPDMPRPLMILATIVIALIAGGIVGAIPGILRAYLGTSEVIVTIMMNYIILYVGNAFIHAFPK DFMQSTDSTIRVGANATYQTPWLTELTGNSRMNIGIFFAIIAVAVIWFMLKKTTLGFEIRAVGLNPHASEYAGISAKRTI ILSMIISGALAGLGGAVEGLGTFQNVYVQGSSLAIGFNGMAVSLLAANSPIGILFAAFLFGVLQVGAPGMNAAQVPSELV SIVTASIIFFVSVHYLIERFVKPKKQVKGGK
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4603
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR002229 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 37463; Mature: 37332
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLQQISVPLISVFLGILLGAIVMWIFGYDAIWGYEELFYTAFGSLRGIGEIFRAMGP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLIGLGFAVASRAGFFNVGLPGQALAGWILSGWFALSHPDMPRPLMILATIVIALIAGG HHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH IVGAIPGILRAYLGTSEVIVTIMMNYIILYVGNAFIHAFPKDFMQSTDSTIRVGANATYQ HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEECCCCEEC TPWLTELTGNSRMNIGIFFAIIAVAVIWFMLKKTTLGFEIRAVGLNPHASEYAGISAKRT CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCCHHHH IILSMIISGALAGLGGAVEGLGTFQNVYVQGSSLAIGFNGMAVSLLAANSPIGILFAAFL HHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCEEEEEECCCEEEEEECCCCHHHHHHHHH FGVLQVGAPGMNAAQVPSELVSIVTASIIFFVSVHYLIERFVKPKKQVKGGK HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC >Mature Secondary Structure SKKLQQISVPLISVFLGILLGAIVMWIFGYDAIWGYEELFYTAFGSLRGIGEIFRAMGP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVLIGLGFAVASRAGFFNVGLPGQALAGWILSGWFALSHPDMPRPLMILATIVIALIAGG HHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH IVGAIPGILRAYLGTSEVIVTIMMNYIILYVGNAFIHAFPKDFMQSTDSTIRVGANATYQ HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEECCCCEEC TPWLTELTGNSRMNIGIFFAIIAVAVIWFMLKKTTLGFEIRAVGLNPHASEYAGISAKRT CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHCCCCHHHH IILSMIISGALAGLGGAVEGLGTFQNVYVQGSSLAIGFNGMAVSLLAANSPIGILFAAFL HHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCEEEEEECCCEEEEEECCCCHHHHHHHHH FGVLQVGAPGMNAAQVPSELVSIVTASIIFFVSVHYLIERFVKPKKQVKGGK HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]