| Definition | Streptococcus pneumoniae D39, complete genome. |
|---|---|
| Accession | NC_008533 |
| Length | 2,046,115 |
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The map label for this gene is yufQ [H]
Identifier: 116516674
GI number: 116516674
Start: 754210
End: 755166
Strand: Direct
Name: yufQ [H]
Synonym: SPD_0742
Alternate gene names: 116516674
Gene position: 754210-755166 (Clockwise)
Preceding gene: 116515653
Following gene: 116516535
Centisome position: 36.86
GC content: 42.74
Gene sequence:
>957_bases ATGTCTATTATAACCTTGCTCCCCCTCTTGGTGTCTTCTATGCTGATTTACTCAGCACCTCTCATCTTTACAAGTATCGG TGGTGTTTTCTCTGAACGTGGTGGTGTGGTAAACGTTGGCCTTGAAGGAATTATGGTTATGGGTGCCTTTTCTGGAGTTG TCTTTAACCTTGAATTTGCAGAACAATTTGGAGCAGCAACTCCATGGCTATCCTTGCTTGTAGCAGGATTGGTTGGTAGT GTTTTCTCTATCATCCACGCAGCAGCGACGGTTCATTTCCGTGCAGACCATGTTGTCAGCGGTACGGTATTGAACTTGAT GGCGCCTGCCTTGGCTGTTTTCTTAGTTAAAGTTCTTTATAACAAAGGACAAACCGACAACCTAAGTCAAACTTTTGGAC GCTTTGATTTCCCAGTCTTGGCAAATATCCCAGTGATTGGTGATATCTTCTTCAAGTCAACTAGTCTACTTGGTTATCTG GCGATTGCCTTCTCATTCCTTGCTTGGTTTATTCTCTTTAAGACTCAATTTGGTCTTCGTCTCCGCTCTGTCGGTGAACA TCCTCAAGCAGCGGATACCTTGGGAATCAACGTCTACAAGATGAGATATTTAGGGGTTATTATTTCAGGTTTTCTAGGTG GAATTGGCGGAGCGATTTATGCGCAATCAATCTCAGTTAACTTCTCAGTGACAACTATTGTTGGACCTGGATTTATCGCC CTTGCTGCGATGATCTTTGGGAAATGGAATCCAATCGGTGCTATGCTTTCTAGTCTCTTCTTTGGACTTTCACAAAGTTT GGCTGTTATCGGTTCTCAATTGCCGTTTCTACAAGGAGTGCCAGCGGTTTATCTTCAAATTGCACCTTATGTTTTGACAA TTCTTGTCTTAGCAGCCTTCTTTGGAAAAGCAGTCGCACCAAAAGCAGATGGTATCAACTACATCAAATCAAAATAA
Upstream 100 bases:
>100_bases TCAGCATTGTAACAGCGTCTATTATCTTCTTTGTCAGTGTTCATTACCTTATCGAACGCTTTGTCAAACCGAAAAAACAA GTTAAAGGAGGTAAGTAAAG
Downstream 100 bases:
>100_bases GCATACAAAAAAACGTCAGTCCAATGACTGAACTGCCCCCCAAAAGTTAGACAGAAAAAATCTAACTTTTGGGGTGTTTT TATTATGAAATTAAGTTATG
Product: sugar ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSIITLLPLLVSSMLIYSAPLIFTSIGGVFSERGGVVNVGLEGIMVMGAFSGVVFNLEFAEQFGAATPWLSLLVAGLVGS VFSIIHAAATVHFRADHVVSGTVLNLMAPALAVFLVKVLYNKGQTDNLSQTFGRFDFPVLANIPVIGDIFFKSTSLLGYL AIAFSFLAWFILFKTQFGLRLRSVGEHPQAADTLGINVYKMRYLGVIISGFLGGIGGAIYAQSISVNFSVTTIVGPGFIA LAAMIFGKWNPIGAMLSSLFFGLSQSLAVIGSQLPFLQGVPAVYLQIAPYVLTILVLAAFFGKAVAPKADGINYIKSK
Sequences:
>Translated_318_residues MSIITLLPLLVSSMLIYSAPLIFTSIGGVFSERGGVVNVGLEGIMVMGAFSGVVFNLEFAEQFGAATPWLSLLVAGLVGS VFSIIHAAATVHFRADHVVSGTVLNLMAPALAVFLVKVLYNKGQTDNLSQTFGRFDFPVLANIPVIGDIFFKSTSLLGYL AIAFSFLAWFILFKTQFGLRLRSVGEHPQAADTLGINVYKMRYLGVIISGFLGGIGGAIYAQSISVNFSVTTIVGPGFIA LAAMIFGKWNPIGAMLSSLFFGLSQSLAVIGSQLPFLQGVPAVYLQIAPYVLTILVLAAFFGKAVAPKADGINYIKSK >Mature_317_residues SIITLLPLLVSSMLIYSAPLIFTSIGGVFSERGGVVNVGLEGIMVMGAFSGVVFNLEFAEQFGAATPWLSLLVAGLVGSV FSIIHAAATVHFRADHVVSGTVLNLMAPALAVFLVKVLYNKGQTDNLSQTFGRFDFPVLANIPVIGDIFFKSTSLLGYLA IAFSFLAWFILFKTQFGLRLRSVGEHPQAADTLGINVYKMRYLGVIISGFLGGIGGAIYAQSISVNFSVTTIVGPGFIAL AAMIFGKWNPIGAMLSSLFFGLSQSLAVIGSQLPFLQGVPAVYLQIAPYVLTILVLAAFFGKAVAPKADGINYIKSK
Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 33735; Mature: 33604
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIITLLPLLVSSMLIYSAPLIFTSIGGVFSERGGVVNVGLEGIMVMGAFSGVVFNLEFA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCEEEEHHH EQFGAATPWLSLLVAGLVGSVFSIIHAAATVHFRADHVVSGTVLNLMAPALAVFLVKVLY HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHH NKGQTDNLSQTFGRFDFPVLANIPVIGDIFFKSTSLLGYLAIAFSFLAWFILFKTQFGLR CCCCCCCHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRSVGEHPQAADTLGINVYKMRYLGVIISGFLGGIGGAIYAQSISVNFSVTTIVGPGFIA HHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHH LAAMIFGKWNPIGAMLSSLFFGLSQSLAVIGSQLPFLQGVPAVYLQIAPYVLTILVLAAF HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHH FGKAVAPKADGINYIKSK HHHCCCCCCCCCHHHCCC >Mature Secondary Structure SIITLLPLLVSSMLIYSAPLIFTSIGGVFSERGGVVNVGLEGIMVMGAFSGVVFNLEFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCEEEEHHH EQFGAATPWLSLLVAGLVGSVFSIIHAAATVHFRADHVVSGTVLNLMAPALAVFLVKVLY HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHH NKGQTDNLSQTFGRFDFPVLANIPVIGDIFFKSTSLLGYLAIAFSFLAWFILFKTQFGLR CCCCCCCHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRSVGEHPQAADTLGINVYKMRYLGVIISGFLGGIGGAIYAQSISVNFSVTTIVGPGFIA HHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHH LAAMIFGKWNPIGAMLSSLFFGLSQSLAVIGSQLPFLQGVPAVYLQIAPYVLTILVLAAF HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHH FGKAVAPKADGINYIKSK HHHCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]