Click here to switch to the map view.

The map label for this gene is yiaL [C]

Identifier: 116515591

GI number: 116515591

Start: 1521008

End: 1521460

Strand: Reverse

Name: yiaL [C]

Synonym: SPD_1503

Alternate gene names: 116515591

Gene position: 1521460-1521008 (Counterclockwise)

Preceding gene: 116517141

Following gene: 116516571

Centisome position: 74.36

GC content: 35.1

Gene sequence:

>453_bases
ATGATTATTACAAAAATTAGCCGTTTAGGAACTTATGTGGGAGTAAATCCACATTTTGCAACATTAATAGATTTTCTAGA
AAAAACAGGACTAGAAAATTTAACAGAAGGTTCGATTGCTATCGATGGTAATCGATTGTTTGGGAATTGCTTTACTTATC
TAGCAGATGGTCAAGCAGGGGCTTTCTTTGAAACACACCAAAAATATTTGGATATTCATTTAGTTTTGGAAAACGAAGAA
GCCATGGCTGTTACATCGCCGGAAAATGTAAGCGTTACCCAAGAATATGATGAAGAGAAAGATATTGAATTATACACAGG
GAAAGTGGAACAGTTGGTTCATTTGAGAGCTGGTGAATGCCTCATCACTTTTCCAGAAGATTTACATCAACCCAAGGTTC
GTATAAATGATGAACCTGTGAAAAAAGTTGTCTTTAAAGTTGCGATTTCTTAA

Upstream 100 bases:

>100_bases
CTAGAGAGTAGTGTTTTTATGTCCTTCTAGTAGAAAATGCTAGACAGAAGAATGGGGAACTTGGATAGGAAAAATAGATT
GAGAAAGGAGGTTAGAAGAG

Downstream 100 bases:

>100_bases
TGTAGAAAGAGAAGAACGATGAAAAAAATGAGAAAGTTTTTATGTCTAGCTGGAATTGCGCTAGCGGCTGTTGCCTTGGT
AGCTTGTTCAGGAAAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MIITKISRLGTYVGVNPHFATLIDFLEKTGLENLTEGSIAIDGNRLFGNCFTYLADGQAGAFFETHQKYLDIHLVLENEE
AMAVTSPENVSVTQEYDEEKDIELYTGKVEQLVHLRAGECLITFPEDLHQPKVRINDEPVKKVVFKVAIS

Sequences:

>Translated_150_residues
MIITKISRLGTYVGVNPHFATLIDFLEKTGLENLTEGSIAIDGNRLFGNCFTYLADGQAGAFFETHQKYLDIHLVLENEE
AMAVTSPENVSVTQEYDEEKDIELYTGKVEQLVHLRAGECLITFPEDLHQPKVRINDEPVKKVVFKVAIS
>Mature_150_residues
MIITKISRLGTYVGVNPHFATLIDFLEKTGLENLTEGSIAIDGNRLFGNCFTYLADGQAGAFFETHQKYLDIHLVLENEE
AMAVTSPENVSVTQEYDEEKDIELYTGKVEQLVHLRAGECLITFPEDLHQPKVRINDEPVKKVVFKVAIS

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16844; Mature: 16844

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITKISRLGTYVGVNPHFATLIDFLEKTGLENLTEGSIAIDGNRLFGNCFTYLADGQAG
CEEEEEHHCCCEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEEECCCCC
AFFETHQKYLDIHLVLENEEAMAVTSPENVSVTQEYDEEKDIELYTGKVEQLVHLRAGEC
CHHHHCCEEEEEEEEEECCCEEEEECCCCCEEECCCCCCCCEEEEECHHHHHHHHCCCCE
LITFPEDLHQPKVRINDEPVKKVVFKVAIS
EEECCHHHCCCCEEECCCHHHHHHHHEECC
>Mature Secondary Structure
MIITKISRLGTYVGVNPHFATLIDFLEKTGLENLTEGSIAIDGNRLFGNCFTYLADGQAG
CEEEEEHHCCCEECCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEEECCCCC
AFFETHQKYLDIHLVLENEEAMAVTSPENVSVTQEYDEEKDIELYTGKVEQLVHLRAGEC
CHHHHCCEEEEEEEEEECCCEEEEECCCCCEEECCCCCCCCEEEEECHHHHHHHHCCCCE
LITFPEDLHQPKVRINDEPVKKVVFKVAIS
EEECCHHHCCCCEEECCCHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA