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The map label for this gene is ytqA [H]

Identifier: 116515520

GI number: 116515520

Start: 588105

End: 588557

Strand: Direct

Name: ytqA [H]

Synonym: SPD_0565

Alternate gene names: 116515520

Gene position: 588105-588557 (Clockwise)

Preceding gene: 116515472

Following gene: 116517049

Centisome position: 28.74

GC content: 40.62

Gene sequence:

>453_bases
ATGAAAGTTATAAAATCTTATAATACCTTGAATGATTATTATCGAAAACTCTTTGGAGAAAAGACTTTTAAAGTCCCTAT
TGATGCGGAATTTGACTGTCCCAATCGTGATGGAACTGTGGCTCATGGAGGCTGTACTTTTTGTACGGTTTCAGGTTCTG
GAGATACTATTGTAGCCCCAGATGCGCCTATCCGTGAGCAATTTTATAAGGAAATTGACTTTATGCACCGTAAGTGGCCG
GATGTTCAGAAGTATCTGGTTTATTTTCAAAATTTTACCAACACCCATGAAAAGGTGGAAGTTATTCGAGAGCGTTATGA
ACAGGCTATCAATGAGCCAGGTGTGGTAGGAATCAATATTGGAATGCGCCCAGACTGTTTACCAGACGAAACCATCGAAT
ATTTGGCTGAGTTATCGGAGTGCATGCATGTGACGGTTGAATTGGGCTTGTAG

Upstream 100 bases:

>100_bases
CATACCCATATTGTATCATAAAAAAAAGCTAATGGAAACGAGAAACAGAGGAATTTATAGGAAAGTCAGGCTTTTGAGAT
TGTGGGTGATTTTTGTTATA

Downstream 100 bases:

>100_bases
ACTACTTATGAAGCAACTTCTGACCTGATTAACCGTGCGTATTCTTATGAATTGTAGGTGGAAACGGTCAAGCGTTTGAG
AAAGTATCCCAAGATTGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKVIKSYNTLNDYYRKLFGEKTFKVPIDAEFDCPNRDGTVAHGGCTFCTVSGSGDTIVAPDAPIREQFYKEIDFMHRKWP
DVQKYLVYFQNFTNTHEKVEVIRERYEQAINEPGVVGINIGMRPDCLPDETIEYLAELSECMHVTVELGL

Sequences:

>Translated_150_residues
MKVIKSYNTLNDYYRKLFGEKTFKVPIDAEFDCPNRDGTVAHGGCTFCTVSGSGDTIVAPDAPIREQFYKEIDFMHRKWP
DVQKYLVYFQNFTNTHEKVEVIRERYEQAINEPGVVGINIGMRPDCLPDETIEYLAELSECMHVTVELGL
>Mature_150_residues
MKVIKSYNTLNDYYRKLFGEKTFKVPIDAEFDCPNRDGTVAHGGCTFCTVSGSGDTIVAPDAPIREQFYKEIDFMHRKWP
DVQKYLVYFQNFTNTHEKVEVIRERYEQAINEPGVVGINIGMRPDCLPDETIEYLAELSECMHVTVELGL

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=151, Percent_Identity=36.4238410596026, Blast_Score=113, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 17252; Mature: 17252

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIKSYNTLNDYYRKLFGEKTFKVPIDAEFDCPNRDGTVAHGGCTFCTVSGSGDTIVAP
CCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCCEEECC
DAPIREQFYKEIDFMHRKWPDVQKYLVYFQNFTNTHEKVEVIRERYEQAINEPGVVGINI
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEC
GMRPDCLPDETIEYLAELSECMHVTVELGL
CCCCCCCCHHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MKVIKSYNTLNDYYRKLFGEKTFKVPIDAEFDCPNRDGTVAHGGCTFCTVSGSGDTIVAP
CCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEECCEEEEEECCCCCEEECC
DAPIREQFYKEIDFMHRKWPDVQKYLVYFQNFTNTHEKVEVIRERYEQAINEPGVVGINI
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEC
GMRPDCLPDETIEYLAELSECMHVTVELGL
CCCCCCCCHHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]