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The map label for this gene is ytqA [H]

Identifier: 116517049

GI number: 116517049

Start: 588615

End: 589061

Strand: Direct

Name: ytqA [H]

Synonym: SPD_0566

Alternate gene names: 116517049

Gene position: 588615-589061 (Clockwise)

Preceding gene: 116515520

Following gene: 116516252

Centisome position: 28.77

GC content: 42.95

Gene sequence:

>447_bases
GTGGAAACGGTCAAGCGTTTGAGAAAGTATCCCAAGATTGAGATTGTTTCCCATTTGATTAATGGTTTGCCTGGTGAAAC
CCATGAGATGATGGTTGAAAATGTCCGCCGTTGTGTCACGAATAACGATATTCAAGGGATTAAACTGCATTTGCTCCATC
TTATGACAAATACTCGTATGCAACGAGATTACCATGAGGGACGTTTACAATTGATGAGTCAGGACGAATATGTCAGGGTC
ATCTGTGACCAACTGGAAATCATTCCCAAACATATCGTCATCCATCGAATCACAGGAGATGCACCTAGGGATATGCTGAT
TGGGCTTATGTGGAGCCTCAATAAATGGGAAGCTCTCAACAGCATTGAGATGGAGATGCGACGTCGTGGAAGTGTTCAAG
GATGCAAGGCTGTAAAACAGGAGTTTGAAAATGAAAAGACCACTTGA

Upstream 100 bases:

>100_bases
GTTATCGGAGTGCATGCATGTGACGGTTGAATTGGGCTTGTAGACTACTTATGAAGCAACTTCTGACCTGATTAACCGTG
CGTATTCTTATGAATTGTAG

Downstream 100 bases:

>100_bases
GATGGCACATGATTTTTTGGCTGAGGTCGTGACAAAAGAGGATGTCGTAGTGGATGCGACTATGGGAAATGGTCATGACA
CGCTTTTTTTAGCCAAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
METVKRLRKYPKIEIVSHLINGLPGETHEMMVENVRRCVTNNDIQGIKLHLLHLMTNTRMQRDYHEGRLQLMSQDEYVRV
ICDQLEIIPKHIVIHRITGDAPRDMLIGLMWSLNKWEALNSIEMEMRRRGSVQGCKAVKQEFENEKTT

Sequences:

>Translated_148_residues
METVKRLRKYPKIEIVSHLINGLPGETHEMMVENVRRCVTNNDIQGIKLHLLHLMTNTRMQRDYHEGRLQLMSQDEYVRV
ICDQLEIIPKHIVIHRITGDAPRDMLIGLMWSLNKWEALNSIEMEMRRRGSVQGCKAVKQEFENEKTT
>Mature_148_residues
METVKRLRKYPKIEIVSHLINGLPGETHEMMVENVRRCVTNNDIQGIKLHLLHLMTNTRMQRDYHEGRLQLMSQDEYVRV
ICDQLEIIPKHIVIHRITGDAPRDMLIGLMWSLNKWEALNSIEMEMRRRGSVQGCKAVKQEFENEKTT

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=122, Percent_Identity=30.327868852459, Blast_Score=73, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 17450; Mature: 17450

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METVKRLRKYPKIEIVSHLINGLPGETHEMMVENVRRCVTNNDIQGIKLHLLHLMTNTRM
CHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
QRDYHEGRLQLMSQDEYVRVICDQLEIIPKHIVIHRITGDAPRDMLIGLMWSLNKWEALN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCHHHHHHH
SIEMEMRRRGSVQGCKAVKQEFENEKTT
HHHHHHHHCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
METVKRLRKYPKIEIVSHLINGLPGETHEMMVENVRRCVTNNDIQGIKLHLLHLMTNTRM
CHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
QRDYHEGRLQLMSQDEYVRVICDQLEIIPKHIVIHRITGDAPRDMLIGLMWSLNKWEALN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHCHHHHHHH
SIEMEMRRRGSVQGCKAVKQEFENEKTT
HHHHHHHHCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]