Click here to switch to the map view.

The map label for this gene is 116515509

Identifier: 116515509

GI number: 116515509

Start: 1120534

End: 1121097

Strand: Direct

Name: 116515509

Synonym: SPD_1090

Alternate gene names: NA

Gene position: 1120534-1121097 (Clockwise)

Preceding gene: 116516321

Following gene: 116515778

Centisome position: 54.76

GC content: 38.3

Gene sequence:

>564_bases
ATGAAAAAACGCTCTAATATTGCACCCATTGCTATCTTTTTTGCTACCATGCTCGTGATACACTTTCTGAGCTCACTTAT
CTTTAACCTTTTTCCATTTCCAATCAAACCGACCATTGTTCATATTCCTGTCATTATTGCCAGCATTATTTATGGTCCAC
GAGTTGGGGTTACACTTGGATTTTTGATGGGATTACTTAGCTTGACGGTTAACACGATTACGATTCTACCGACAAGCTAC
CTCTTCTCTCCCTTCGTACCAAACGGAAACATCTACTCAGCTATCATTGCCATCGTCCCACGTATTTTGATTGGTTTAAC
TCCTTACTTAGTCTATAAACTGATGAAAAACAAGACTGGTCTGATTTTAGCTGGAGCCCTTGGTTCCTTGACAAATACTA
TCTTTGTCCTTGGAGGAATCTTCTTCCTATTTGGAAATGTTTATAATGGAAATATCCAACTTCTTCTGGCAACCGTTATC
TCAACAAATTCAATTGCTGAATTGGTCATTTCTGCAATTCTAACCCTAGCCATTGTTCCACGACTACAAACCTTGAAAAA
ATAA

Upstream 100 bases:

>100_bases
CTGATTGCTCCTAAGGAATCCCTACTAGCTTGTGGAGACCACGGACGAGGAGCTTTAGCTGACCTCACAATTATTTTAGA
AAGAATAAAGGAAACTATCG

Downstream 100 bases:

>100_bases
AAACAATCTCCGCTTTCAAACCTGAAGGTGGAGATTTTGCTCTATACAGTTTCTTTTTAATGAAATCTTTACTATAGTAA
AACGAAATAAGAACAGGACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKKRSNIAPIAIFFATMLVIHFLSSLIFNLFPFPIKPTIVHIPVIIASIIYGPRVGVTLGFLMGLLSLTVNTITILPTSY
LFSPFVPNGNIYSAIIAIVPRILIGLTPYLVYKLMKNKTGLILAGALGSLTNTIFVLGGIFFLFGNVYNGNIQLLLATVI
STNSIAELVISAILTLAIVPRLQTLKK

Sequences:

>Translated_187_residues
MKKRSNIAPIAIFFATMLVIHFLSSLIFNLFPFPIKPTIVHIPVIIASIIYGPRVGVTLGFLMGLLSLTVNTITILPTSY
LFSPFVPNGNIYSAIIAIVPRILIGLTPYLVYKLMKNKTGLILAGALGSLTNTIFVLGGIFFLFGNVYNGNIQLLLATVI
STNSIAELVISAILTLAIVPRLQTLKK
>Mature_187_residues
MKKRSNIAPIAIFFATMLVIHFLSSLIFNLFPFPIKPTIVHIPVIIASIIYGPRVGVTLGFLMGLLSLTVNTITILPTSY
LFSPFVPNGNIYSAIIAIVPRILIGLTPYLVYKLMKNKTGLILAGALGSLTNTIFVLGGIFFLFGNVYNGNIQLLLATVI
STNSIAELVISAILTLAIVPRLQTLKK

Specific function: Unknown

COG id: COG4684

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20273; Mature: 20273

Theoretical pI: Translated: 10.94; Mature: 10.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRSNIAPIAIFFATMLVIHFLSSLIFNLFPFPIKPTIVHIPVIIASIIYGPRVGVTLG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
FLMGLLSLTVNTITILPTSYLFSPFVPNGNIYSAIIAIVPRILIGLTPYLVYKLMKNKTG
HHHHHHHHHHHHHHEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LILAGALGSLTNTIFVLGGIFFLFGNVYNGNIQLLLATVISTNSIAELVISAILTLAIVP
EEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RLQTLKK
HHHHHCC
>Mature Secondary Structure
MKKRSNIAPIAIFFATMLVIHFLSSLIFNLFPFPIKPTIVHIPVIIASIIYGPRVGVTLG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
FLMGLLSLTVNTITILPTSYLFSPFVPNGNIYSAIIAIVPRILIGLTPYLVYKLMKNKTG
HHHHHHHHHHHHHHEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LILAGALGSLTNTIFVLGGIFFLFGNVYNGNIQLLLATVISTNSIAELVISAILTLAIVP
EEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
RLQTLKK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA